BLASTX nr result

ID: Dioscorea21_contig00034431 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00034431
         (302 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003589055.1| hypothetical protein MTR_1g017920 [Medicago ...    67   1e-09
emb|CBI19393.3| unnamed protein product [Vitis vinifera]               66   3e-09
ref|XP_004141406.1| PREDICTED: uncharacterized protein LOC101210...    65   4e-09
ref|XP_002301145.1| predicted protein [Populus trichocarpa] gi|2...    65   4e-09
ref|XP_002893469.1| F17L21.26 [Arabidopsis lyrata subsp. lyrata]...    64   1e-08

>ref|XP_003589055.1| hypothetical protein MTR_1g017920 [Medicago truncatula]
           gi|355478103|gb|AES59306.1| hypothetical protein
           MTR_1g017920 [Medicago truncatula]
          Length = 366

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 31/63 (49%), Positives = 42/63 (66%), Gaps = 1/63 (1%)
 Frame = +1

Query: 115 IGNIIEILK-PTRTLVTMKPEDVEERIEMDEFPAIISDQKNRARLMNTAYKEMVKQPECV 291
           +G I E+   P  T    KPE++E+ +E +E PA+ISD  NR R+ N+AYKEMV QPEC 
Sbjct: 218 VGCISEVSAIPCVTKTPKKPEELEQEVESEELPAVISDSNNRVRMANSAYKEMVGQPECP 277

Query: 292 WFD 300
           W +
Sbjct: 278 WLE 280


>emb|CBI19393.3| unnamed protein product [Vitis vinifera]
          Length = 279

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 40/106 (37%), Positives = 54/106 (50%), Gaps = 7/106 (6%)
 Frame = +1

Query: 4   PCPPPRHLPAELXXXXXXXXXXXXXXXXXXITSHIRIIGNIIEI------LKPTRTL-VT 162
           PCPPP+ LP E                       +R IG+ I +      L P   + + 
Sbjct: 110 PCPPPQ-LPVEKDLLQQLQRAPANTTNVIS-PQPVRPIGSSISVRCMRDDLSPIPEVQIL 167

Query: 163 MKPEDVEERIEMDEFPAIISDQKNRARLMNTAYKEMVKQPECVWFD 300
            KPE+VEE +E +  PA+ISD  N+ R+ N+AYKEMV QPEC W +
Sbjct: 168 KKPEEVEEEMESETLPAVISDSNNKIRMANSAYKEMVGQPECPWLN 213


>ref|XP_004141406.1| PREDICTED: uncharacterized protein LOC101210181 [Cucumis sativus]
           gi|449508215|ref|XP_004163252.1| PREDICTED:
           uncharacterized protein LOC101226673 [Cucumis sativus]
          Length = 370

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 34/73 (46%), Positives = 46/73 (63%), Gaps = 4/73 (5%)
 Frame = +1

Query: 94  ITSHIRIIGNIIEILKPTRTLVT----MKPEDVEERIEMDEFPAIISDQKNRARLMNTAY 261
           + S IR+ G I E   P  +  T     KP++VE+ +E +  PA+ISD  NR R+ N+AY
Sbjct: 202 VGSSIRV-GCINEAQNPVHSNNTPQLPKKPDEVEKEVESEVLPAVISDSNNRVRMANSAY 260

Query: 262 KEMVKQPECVWFD 300
           KEMV QPEC+W D
Sbjct: 261 KEMVGQPECLWLD 273


>ref|XP_002301145.1| predicted protein [Populus trichocarpa] gi|222842871|gb|EEE80418.1|
           predicted protein [Populus trichocarpa]
          Length = 363

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 28/48 (58%), Positives = 34/48 (70%)
 Frame = +1

Query: 157 VTMKPEDVEERIEMDEFPAIISDQKNRARLMNTAYKEMVKQPECVWFD 300
           V  KPE+VEE +E +  P +ISD  N+ RL N+AYKEMV QPEC W D
Sbjct: 226 VPKKPEEVEEEVESEVLPTVISDSNNKVRLANSAYKEMVGQPECSWLD 273


>ref|XP_002893469.1| F17L21.26 [Arabidopsis lyrata subsp. lyrata]
            gi|297339311|gb|EFH69728.1| F17L21.26 [Arabidopsis lyrata
            subsp. lyrata]
          Length = 1048

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 25/44 (56%), Positives = 34/44 (77%)
 Frame = +1

Query: 169  PEDVEERIEMDEFPAIISDQKNRARLMNTAYKEMVKQPECVWFD 300
            P +VEE +E D+ P++I+D  NR RL+N+AYKEM+ QPEC W D
Sbjct: 920  PREVEEEVESDDLPSVITDSNNRVRLVNSAYKEMMGQPECSWLD 963


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