BLASTX nr result
ID: Dioscorea21_contig00034408
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dioscorea21_contig00034408
(452 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|ZP_01951366.1| conserved hypothetical protein [Vibrio choler... 124 6e-33
ref|ZP_14354411.1| hypothetical protein VCHC1A2_3330 [Vibrio cho... 106 1e-27
ref|ZP_01678976.1| conserved hypothetical protein [Vibrio choler... 106 1e-27
ref|ZP_01980035.1| conserved hypothetical protein [Vibrio choler... 105 2e-27
emb|CCG20230.1| hypothetical protein KUM_1452 [Taylorella asinig... 88 3e-27
>ref|ZP_01951366.1| conserved hypothetical protein [Vibrio cholerae 1587]
gi|124113369|gb|EAY32189.1| conserved hypothetical
protein [Vibrio cholerae 1587]
Length = 171
Score = 124 bits (310), Expect(2) = 6e-33
Identities = 69/106 (65%), Positives = 74/106 (69%)
Frame = +1
Query: 1 FPSRYSSLSVSQ*YLALEDGPPIFRQSFSCSVLLDFMTKRFSRTGLSPTMAALSRAFR*S 180
FP SLSVSQ YLALEDGPPIFRQ +C LLDF S TGLSP +A LS F
Sbjct: 23 FPHGTGSLSVSQEYLALEDGPPIFRQDITCPALLDFTLDEASVTGLSPCIAKLSSLFTYF 82
Query: 181 QSHLRASPRSLATTKGISVDFFSSGYLDVSVPLVRSIHLCIQCKVT 318
LRA+P SLA T GISVDFFSSGYLDVSVP V S++LCIQ VT
Sbjct: 83 TECLRANPGSLAATTGISVDFFSSGYLDVSVPPVCSVNLCIQLTVT 128
Score = 42.0 bits (97), Expect(2) = 6e-33
Identities = 23/39 (58%), Positives = 28/39 (71%)
Frame = +3
Query: 333 GFPHSDISGSKSVCRLPEAFRRLPRLSSPLTAKASTVCA 449
GFPHS+I+ S L A+R+L R SSPLTA+ASTV A
Sbjct: 133 GFPHSEIADSNGSYCLICAYRKLVRPSSPLTAQASTVYA 171
>ref|ZP_14354411.1| hypothetical protein VCHC1A2_3330 [Vibrio cholerae HC-1A2]
gi|408619428|gb|EKK92457.1| hypothetical protein
VCHC1A2_3330 [Vibrio cholerae HC-1A2]
Length = 133
Score = 106 bits (264), Expect(2) = 1e-27
Identities = 57/90 (63%), Positives = 63/90 (70%)
Frame = +1
Query: 49 LEDGPPIFRQSFSCSVLLDFMTKRFSRTGLSPTMAALSRAFR*SQSHLRASPRSLATTKG 228
+EDGPPIFRQ +C LLDF S TGLSP +A LS F LRA+P SLA T G
Sbjct: 1 MEDGPPIFRQDITCPALLDFTLDEASVTGLSPCIAKLSSLFTYFTECLRANPDSLAATTG 60
Query: 229 ISVDFFSSGYLDVSVPLVRSIHLCIQCKVT 318
ISVDFFSSGYLDVSVP V S++LCIQ VT
Sbjct: 61 ISVDFFSSGYLDVSVPPVCSVNLCIQLTVT 90
Score = 42.0 bits (97), Expect(2) = 1e-27
Identities = 23/39 (58%), Positives = 28/39 (71%)
Frame = +3
Query: 333 GFPHSDISGSKSVCRLPEAFRRLPRLSSPLTAKASTVCA 449
GFPHS+I+ S L A+R+L R SSPLTA+ASTV A
Sbjct: 95 GFPHSEIADSNGSYCLICAYRKLVRPSSPLTAQASTVYA 133
>ref|ZP_01678976.1| conserved hypothetical protein [Vibrio cholerae 2740-80]
gi|121730781|ref|ZP_01682868.1| conserved hypothetical
protein [Vibrio cholerae V52]
gi|121730795|ref|ZP_01682876.1| serine acetyltransferase
[Vibrio cholerae V52] gi|153217595|ref|ZP_01951276.1|
conserved hypothetical protein [Vibrio cholerae 1587]
gi|153217785|ref|ZP_01951428.1| conserved hypothetical
protein [Vibrio cholerae 1587]
gi|153803669|ref|ZP_01958255.1| conserved hypothetical
protein [Vibrio cholerae MZO-3]
gi|153803744|ref|ZP_01958330.1| conserved hypothetical
protein [Vibrio cholerae MZO-3]
gi|153824265|ref|ZP_01976932.1| conserved hypothetical
protein [Vibrio cholerae B33]
gi|153827712|ref|ZP_01980379.1| conserved hypothetical
protein [Vibrio cholerae MZO-2]
gi|153827713|ref|ZP_01980380.1| conserved hypothetical
protein [Vibrio cholerae MZO-2]
gi|153829103|ref|ZP_01981770.1| conserved hypothetical
protein [Vibrio cholerae 623-39]
gi|419827856|ref|ZP_14351349.1| hypothetical protein
VCHC1A2_0179 [Vibrio cholerae HC-1A2]
gi|419828962|ref|ZP_14352452.1| hypothetical protein
VCHC1A2_1314 [Vibrio cholerae HC-1A2]
gi|419829327|ref|ZP_14352815.1| hypothetical protein
VCHC1A2_1704 [Vibrio cholerae HC-1A2]
gi|419831180|ref|ZP_14354662.1| hypothetical protein
VCHC1A2_3588 [Vibrio cholerae HC-1A2]
gi|121546362|gb|EAX56623.1| conserved hypothetical
protein [Vibrio cholerae 2740-80]
gi|121627630|gb|EAX60309.1| serine acetyltransferase
[Vibrio cholerae V52] gi|121627645|gb|EAX60318.1|
conserved hypothetical protein [Vibrio cholerae V52]
gi|124113307|gb|EAY32127.1| conserved hypothetical
protein [Vibrio cholerae 1587]
gi|124113457|gb|EAY32277.1| conserved hypothetical
protein [Vibrio cholerae 1587]
gi|124120720|gb|EAY39463.1| conserved hypothetical
protein [Vibrio cholerae MZO-3]
gi|124120795|gb|EAY39538.1| conserved hypothetical
protein [Vibrio cholerae MZO-3]
gi|126518212|gb|EAZ75437.1| conserved hypothetical
protein [Vibrio cholerae B33]
gi|148875431|gb|EDL73566.1| conserved hypothetical
protein [Vibrio cholerae 623-39]
gi|149737811|gb|EDM52716.1| conserved hypothetical
protein [Vibrio cholerae MZO-2]
gi|149737812|gb|EDM52717.1| conserved hypothetical
protein [Vibrio cholerae MZO-2]
gi|408619138|gb|EKK92178.1| hypothetical protein
VCHC1A2_3588 [Vibrio cholerae HC-1A2]
gi|408621961|gb|EKK94953.1| hypothetical protein
VCHC1A2_1704 [Vibrio cholerae HC-1A2]
gi|408622559|gb|EKK95542.1| hypothetical protein
VCHC1A2_1314 [Vibrio cholerae HC-1A2]
gi|408624607|gb|EKK97551.1| hypothetical protein
VCHC1A2_0179 [Vibrio cholerae HC-1A2]
Length = 133
Score = 106 bits (264), Expect(2) = 1e-27
Identities = 57/90 (63%), Positives = 63/90 (70%)
Frame = +1
Query: 49 LEDGPPIFRQSFSCSVLLDFMTKRFSRTGLSPTMAALSRAFR*SQSHLRASPRSLATTKG 228
+EDGPPIFRQ +C LLDF S TGLSP +A LS F LRA+P SLA T G
Sbjct: 1 MEDGPPIFRQDITCPALLDFTLDEASVTGLSPCIAKLSSLFTYFTECLRANPGSLAATTG 60
Query: 229 ISVDFFSSGYLDVSVPLVRSIHLCIQCKVT 318
ISVDFFSSGYLDVSVP V S++LCIQ VT
Sbjct: 61 ISVDFFSSGYLDVSVPPVCSVNLCIQLTVT 90
Score = 42.0 bits (97), Expect(2) = 1e-27
Identities = 23/39 (58%), Positives = 28/39 (71%)
Frame = +3
Query: 333 GFPHSDISGSKSVCRLPEAFRRLPRLSSPLTAKASTVCA 449
GFPHS+I+ S L A+R+L R SSPLTA+ASTV A
Sbjct: 95 GFPHSEIADSNGSYCLICAYRKLVRPSSPLTAQASTVYA 133
>ref|ZP_01980035.1| conserved hypothetical protein [Vibrio cholerae MZO-2]
gi|149738717|gb|EDM53059.1| conserved hypothetical
protein [Vibrio cholerae MZO-2]
Length = 133
Score = 105 bits (262), Expect(2) = 2e-27
Identities = 57/90 (63%), Positives = 63/90 (70%)
Frame = +1
Query: 49 LEDGPPIFRQSFSCSVLLDFMTKRFSRTGLSPTMAALSRAFR*SQSHLRASPRSLATTKG 228
+EDGPPIFRQ +C LLDF S TGLSP +A LS F LRA+P SLA T G
Sbjct: 1 MEDGPPIFRQDITCPALLDFTLDEASVTGLSPCIAKLSSLFTYFIECLRANPGSLAATTG 60
Query: 229 ISVDFFSSGYLDVSVPLVRSIHLCIQCKVT 318
ISVDFFSSGYLDVSVP V S++LCIQ VT
Sbjct: 61 ISVDFFSSGYLDVSVPPVCSVNLCIQLTVT 90
Score = 42.0 bits (97), Expect(2) = 2e-27
Identities = 23/39 (58%), Positives = 28/39 (71%)
Frame = +3
Query: 333 GFPHSDISGSKSVCRLPEAFRRLPRLSSPLTAKASTVCA 449
GFPHS+I+ S L A+R+L R SSPLTA+ASTV A
Sbjct: 95 GFPHSEIADSNGSYCLICAYRKLVRPSSPLTAQASTVYA 133
>emb|CCG20230.1| hypothetical protein KUM_1452 [Taylorella asinigenitalis 14/45]
Length = 175
Score = 88.2 bits (217), Expect(2) = 3e-27
Identities = 56/109 (51%), Positives = 64/109 (58%), Gaps = 4/109 (3%)
Frame = +1
Query: 1 FPSRYSSLSVSQ*YLALEDGPPIFRQSFSCSVLLDFMTKRF---SRTGLSPTMAALSRAF 171
FP SLSV YLALEDGPPIF Q ++C LL S TGLSP+ L F
Sbjct: 20 FPHGTGSLSVDHEYLALEDGPPIFEQDYTCPALLVATPSTITIVSSTGLSPSTVLLPSKF 79
Query: 172 R*SQSHLRAS-PRSLATTKGISVDFFSSGYLDVSVPLVRSIHLCIQCKV 315
+L A+ P S ATT ISVDFFSS YLDVSV VR + LCIQ ++
Sbjct: 80 DYYNYYLVAAHPISFATTFRISVDFFSSSYLDVSVHSVRLLTLCIQIRI 128
Score = 58.5 bits (140), Expect(2) = 3e-27
Identities = 29/51 (56%), Positives = 32/51 (62%)
Frame = +2
Query: 293 TYVFSVR*PSYDGWVPPFRHLRIKVCLPTPRSFSQATTSFIASDCQGIHRM 445
T +R P WV PF +LRI LPTPRSFSQA TSF A D QGIH +
Sbjct: 121 TLCIQIRIPPKKRWVSPFGYLRINAHLPTPRSFSQAITSFFACDRQGIHHV 171