BLASTX nr result

ID: Dioscorea21_contig00034374 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00034374
         (276 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002322190.1| predicted protein [Populus trichocarpa] gi|2...   107   1e-21
gb|ABK96162.1| unknown [Populus trichocarpa]                          107   1e-21
emb|CAN62187.1| hypothetical protein VITISV_003709 [Vitis vinifera]   105   4e-21
emb|CBI14973.3| unnamed protein product [Vitis vinifera]              104   6e-21
ref|XP_002278116.1| PREDICTED: putative pentatricopeptide repeat...   104   6e-21

>ref|XP_002322190.1| predicted protein [Populus trichocarpa] gi|222869186|gb|EEF06317.1|
           predicted protein [Populus trichocarpa]
          Length = 459

 Score =  107 bits (266), Expect = 1e-21
 Identities = 48/91 (52%), Positives = 64/91 (70%)
 Frame = -1

Query: 273 GINSSVSVSCGLIDAYSKCGFAQDGFRIFEMIPRRTLVAYNTVILSMGSNGLGVEAMQTF 94
           G  S V VS  LID YSKCGF   G R+FE +P R +V+YN++I  +G +GL  +A   F
Sbjct: 243 GFESHVMVSSALIDMYSKCGFVGLGLRVFENMPNRNIVSYNSIISGLGLHGLASQAFDMF 302

Query: 93  VSMLNEGLKPDKATFSALLCACCHSGLQMEG 1
             ++ +GLKPD++TFSALLCACCH+GL  +G
Sbjct: 303 TEIVEKGLKPDESTFSALLCACCHAGLVKDG 333


>gb|ABK96162.1| unknown [Populus trichocarpa]
          Length = 553

 Score =  107 bits (266), Expect = 1e-21
 Identities = 48/91 (52%), Positives = 64/91 (70%)
 Frame = -1

Query: 273 GINSSVSVSCGLIDAYSKCGFAQDGFRIFEMIPRRTLVAYNTVILSMGSNGLGVEAMQTF 94
           G  S V VS  LID YSKCGF   G R+FE +P R +V+YN++I  +G +GL  +A   F
Sbjct: 337 GFESHVMVSSALIDMYSKCGFVGLGLRVFENMPNRNIVSYNSIISGLGLHGLASQAFDMF 396

Query: 93  VSMLNEGLKPDKATFSALLCACCHSGLQMEG 1
             ++ +GLKPD++TFSALLCACCH+GL  +G
Sbjct: 397 TEIVEKGLKPDESTFSALLCACCHAGLVKDG 427


>emb|CAN62187.1| hypothetical protein VITISV_003709 [Vitis vinifera]
          Length = 560

 Score =  105 bits (262), Expect = 4e-21
 Identities = 46/91 (50%), Positives = 64/91 (70%)
 Frame = -1

Query: 273 GINSSVSVSCGLIDAYSKCGFAQDGFRIFEMIPRRTLVAYNTVILSMGSNGLGVEAMQTF 94
           G+ S V +S  LID YSKCGF   G R+F+ +P R  V+YN++IL +G +GL  +A + F
Sbjct: 342 GLESEVMISSALIDMYSKCGFVNLGVRVFDSMPNRNTVSYNSMILGLGIHGLAXQAFKMF 401

Query: 93  VSMLNEGLKPDKATFSALLCACCHSGLQMEG 1
             +L +G KPD++TFSALLC CCH+GL  +G
Sbjct: 402 EEVLEKGFKPDESTFSALLCTCCHAGLVNDG 432


>emb|CBI14973.3| unnamed protein product [Vitis vinifera]
          Length = 504

 Score =  104 bits (260), Expect = 6e-21
 Identities = 46/91 (50%), Positives = 63/91 (69%)
 Frame = -1

Query: 273 GINSSVSVSCGLIDAYSKCGFAQDGFRIFEMIPRRTLVAYNTVILSMGSNGLGVEAMQTF 94
           G+ S V +S  LID YSKCGF   G R+F+ +P R  V+YN++IL +G +GL  +A + F
Sbjct: 286 GLESEVMISSALIDMYSKCGFVNLGVRVFDSMPNRNTVSYNSMILGLGIHGLAPQAFKMF 345

Query: 93  VSMLNEGLKPDKATFSALLCACCHSGLQMEG 1
             +L +G KPD++TFSALLC CCH+GL   G
Sbjct: 346 EEVLEKGFKPDESTFSALLCTCCHAGLVKNG 376


>ref|XP_002278116.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g64310-like [Vitis vinifera]
          Length = 560

 Score =  104 bits (260), Expect = 6e-21
 Identities = 46/91 (50%), Positives = 63/91 (69%)
 Frame = -1

Query: 273 GINSSVSVSCGLIDAYSKCGFAQDGFRIFEMIPRRTLVAYNTVILSMGSNGLGVEAMQTF 94
           G+ S V +S  LID YSKCGF   G R+F+ +P R  V+YN++IL +G +GL  +A + F
Sbjct: 342 GLESEVMISSALIDMYSKCGFVNLGVRVFDSMPNRNTVSYNSMILGLGIHGLAPQAFKMF 401

Query: 93  VSMLNEGLKPDKATFSALLCACCHSGLQMEG 1
             +L +G KPD++TFSALLC CCH+GL   G
Sbjct: 402 EEVLEKGFKPDESTFSALLCTCCHAGLVKNG 432


Top