BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00034360
         (275 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004134918.1| PREDICTED: pentatricopeptide repeat-containi...    77   1e-12
ref|XP_002323645.1| predicted protein [Populus trichocarpa] gi|2...    75   6e-12
ref|XP_002271266.1| PREDICTED: pentatricopeptide repeat-containi...    74   1e-11
emb|CAN61464.1| hypothetical protein VITISV_005683 [Vitis vinifera]    74   1e-11
ref|XP_004139593.1| PREDICTED: pentatricopeptide repeat-containi...    74   2e-11

>ref|XP_004134918.1| PREDICTED: pentatricopeptide repeat-containing protein At5g46460,
           mitochondrial-like [Cucumis sativus]
           gi|449533166|ref|XP_004173548.1| PREDICTED:
           pentatricopeptide repeat-containing protein At5g46460,
           mitochondrial-like [Cucumis sativus]
          Length = 712

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 35/87 (40%), Positives = 60/87 (68%)
 Frame = -2

Query: 271 GFDSDVYVATSLIELYSKCGHLSFACWLFSKMSFRNIVSWNSLIHGCVENGFPRVSLKLF 92
           G +SD++V+ SL+ +Y+KCGH++    +F++MS +N+VSWNS+I GC ++GF R +L LF
Sbjct: 370 GLESDIFVSNSLVVMYTKCGHINDGIAVFTRMSRKNVVSWNSIIVGCAQHGFGRWALTLF 429

Query: 91  FFMQLQDGLMPDSTSVVGAVESIGLRG 11
             M ++  + PD  ++ G + + G  G
Sbjct: 430 AQM-IRTRVDPDEITLAGLLSACGHSG 455


>ref|XP_002323645.1| predicted protein [Populus trichocarpa] gi|222868275|gb|EEF05406.1|
           predicted protein [Populus trichocarpa]
          Length = 682

 Score = 75.1 bits (183), Expect = 6e-12
 Identities = 39/88 (44%), Positives = 56/88 (63%)
 Frame = -2

Query: 274 NGFDSDVYVATSLIELYSKCGHLSFACWLFSKMSFRNIVSWNSLIHGCVENGFPRVSLKL 95
           NG   +V+VAT+L++ Y KCG++  A  +F  M  +NIVSW+S+I G   NG P+ +L L
Sbjct: 238 NGMVRNVFVATALVDFYGKCGNMERARSVFDGMLEKNIVSWSSMIQGYASNGLPKEALDL 297

Query: 94  FFFMQLQDGLMPDSTSVVGAVESIGLRG 11
           FF M L +GL PD  ++VG + S    G
Sbjct: 298 FFKM-LNEGLKPDCYAMVGVLCSCARLG 324


>ref|XP_002271266.1| PREDICTED: pentatricopeptide repeat-containing protein At3g16610
           [Vitis vinifera]
          Length = 785

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 35/84 (41%), Positives = 59/84 (70%)
 Frame = -2

Query: 271 GFDSDVYVATSLIELYSKCGHLSFACWLFSKMSFRNIVSWNSLIHGCVENGFPRVSLKLF 92
           G +SDV+V T+L++ Y+KCG L  A  LFS MS R++V+WN++I GC   G    +++L 
Sbjct: 139 GLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAMIAGCSLYGLCDDAVQLI 198

Query: 91  FFMQLQDGLMPDSTSVVGAVESIG 20
             MQ ++G+ P+S+++VG + ++G
Sbjct: 199 MQMQ-EEGICPNSSTIVGVLPTVG 221



 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 27/76 (35%), Positives = 51/76 (67%)
 Frame = -2

Query: 259 DVYVATSLIELYSKCGHLSFACWLFSKMSFRNIVSWNSLIHGCVENGFPRVSLKLFFFMQ 80
           D+ +  +L+ +Y+KCG +  A   F +M+ ++ VS+++++ GCV+NG   V+L +F  MQ
Sbjct: 346 DILLGNTLLSMYAKCGVIDDAIRFFDEMNPKDSVSFSAIVSGCVQNGNAAVALSIFRMMQ 405

Query: 79  LQDGLMPDSTSVVGAV 32
           L  G+ PD T+++G +
Sbjct: 406 L-SGIDPDLTTMLGVL 420



 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 33/87 (37%), Positives = 51/87 (58%)
 Frame = -2

Query: 271 GFDSDVYVATSLIELYSKCGHLSFACWLFSKMSFRNIVSWNSLIHGCVENGFPRVSLKLF 92
           GF +D  +  +LI++YSKCG +SFA  +F++M   +IVSWN++I G   +G    +L LF
Sbjct: 443 GFATDTLICNALIDMYSKCGKISFAREVFNRMDRHDIVSWNAMIIGYGIHGLGMEALGLF 502

Query: 91  FFMQLQDGLMPDSTSVVGAVESIGLRG 11
             + L  GL PD  + +  + S    G
Sbjct: 503 HDL-LALGLKPDDITFICLLSSCSHSG 528


>emb|CAN61464.1| hypothetical protein VITISV_005683 [Vitis vinifera]
          Length = 785

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 35/84 (41%), Positives = 59/84 (70%)
 Frame = -2

Query: 271 GFDSDVYVATSLIELYSKCGHLSFACWLFSKMSFRNIVSWNSLIHGCVENGFPRVSLKLF 92
           G +SDV+V T+L++ Y+KCG L  A  LFS MS R++V+WN++I GC   G    +++L 
Sbjct: 139 GLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAMIAGCSLYGLCDDAVQLI 198

Query: 91  FFMQLQDGLMPDSTSVVGAVESIG 20
             MQ ++G+ P+S+++VG + ++G
Sbjct: 199 MQMQ-EEGICPNSSTIVGVLPTVG 221



 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 33/87 (37%), Positives = 51/87 (58%)
 Frame = -2

Query: 271 GFDSDVYVATSLIELYSKCGHLSFACWLFSKMSFRNIVSWNSLIHGCVENGFPRVSLKLF 92
           GF +D  +  +LI++YSKCG +SFA  +F++M   +IVSWN++I G   +G    +L LF
Sbjct: 443 GFATDTLICNALIDMYSKCGKISFAREVFNRMDRHDIVSWNAMIIGYGIHGLGMEALGLF 502

Query: 91  FFMQLQDGLMPDSTSVVGAVESIGLRG 11
             + L  GL PD  + +  + S    G
Sbjct: 503 HDL-LALGLKPDDITFICLLSSCSHSG 528



 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 27/76 (35%), Positives = 50/76 (65%)
 Frame = -2

Query: 259 DVYVATSLIELYSKCGHLSFACWLFSKMSFRNIVSWNSLIHGCVENGFPRVSLKLFFFMQ 80
           D+ +  +L+ +Y+KCG +  A   F  M+ ++ VS+++++ GCV+NG   V+L +F  MQ
Sbjct: 346 DILLGNTLLSMYAKCGVIDDAIRFFDXMNPKDSVSFSAIVSGCVQNGNAAVALSIFRMMQ 405

Query: 79  LQDGLMPDSTSVVGAV 32
           L  G+ PD T+++G +
Sbjct: 406 L-SGIDPDLTTMLGVL 420


>ref|XP_004139593.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05750,
           chloroplastic-like [Cucumis sativus]
          Length = 525

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 37/89 (41%), Positives = 55/89 (61%)
 Frame = -2

Query: 268 FDSDVYVATSLIELYSKCGHLSFACWLFSKMSFRNIVSWNSLIHGCVENGFPRVSLKLFF 89
           F  ++ ++ SLI++YS+CG + FA  +F KM+ R +VSWNS+I G   NGF   SL+ F+
Sbjct: 258 FKDNIKISNSLIDMYSRCGCIEFARQVFVKMAKRTLVSWNSIIVGFAVNGFADESLEFFY 317

Query: 88  FMQLQDGLMPDSTSVVGAVESIGLRGYEN 2
            MQ ++G  PD  S  GA+ +    G  N
Sbjct: 318 AMQ-KEGFKPDGVSYTGALTACSHAGLVN 345