BLASTX nr result

ID: Dioscorea21_contig00034357 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00034357
         (276 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002298476.1| predicted protein [Populus trichocarpa] gi|2...   103   1e-20
ref|XP_002527043.1| Ran GTPase binding protein, putative [Ricinu...   101   5e-20
ref|XP_002313993.1| predicted protein [Populus trichocarpa] gi|2...   101   5e-20
tpg|DAA55791.1| TPA: putative regulator of chromosome condensati...    96   2e-18
ref|XP_002279847.2| PREDICTED: uncharacterized protein LOC100248...    96   3e-18

>ref|XP_002298476.1| predicted protein [Populus trichocarpa] gi|222845734|gb|EEE83281.1|
           predicted protein [Populus trichocarpa]
          Length = 1109

 Score =  103 bits (258), Expect = 1e-20
 Identities = 46/70 (65%), Positives = 59/70 (84%)
 Frame = +2

Query: 2   SDPLRLSSPYDSPPKNGSDKSFSDVILYAIPPRGFFPTDSATGSANSLSSGFSDCANDHV 181
           +D LR+ SPY+SPPKNG DK+FSDV+LYA+PP+GFFP+DSA+GS +SLSSG SD  + H+
Sbjct: 181 ADHLRIHSPYESPPKNGLDKTFSDVVLYAVPPKGFFPSDSASGSVHSLSSGGSDSVHGHM 240

Query: 182 KGIAADGFRV 211
           K +A D FRV
Sbjct: 241 KAVAMDAFRV 250


>ref|XP_002527043.1| Ran GTPase binding protein, putative [Ricinus communis]
           gi|223533605|gb|EEF35343.1| Ran GTPase binding protein,
           putative [Ricinus communis]
          Length = 1100

 Score =  101 bits (252), Expect = 5e-20
 Identities = 47/69 (68%), Positives = 56/69 (81%)
 Frame = +2

Query: 5   DPLRLSSPYDSPPKNGSDKSFSDVILYAIPPRGFFPTDSATGSANSLSSGFSDCANDHVK 184
           D LRL SPY+SPPKNG DK+FSDVILYA+PP+GFFP+DSA+ S +SLSSG SD    H+K
Sbjct: 171 DQLRLHSPYESPPKNGLDKAFSDVILYAVPPKGFFPSDSASASVHSLSSGGSDSVRGHMK 230

Query: 185 GIAADGFRV 211
            +A D FRV
Sbjct: 231 AMAMDAFRV 239


>ref|XP_002313993.1| predicted protein [Populus trichocarpa] gi|222850401|gb|EEE87948.1|
           predicted protein [Populus trichocarpa]
          Length = 1104

 Score =  101 bits (252), Expect = 5e-20
 Identities = 46/70 (65%), Positives = 58/70 (82%)
 Frame = +2

Query: 2   SDPLRLSSPYDSPPKNGSDKSFSDVILYAIPPRGFFPTDSATGSANSLSSGFSDCANDHV 181
           +D  RL SPY+SPPKNG DK+FSDV+LYA+PP+GFFP+DSA+GS +SLSSG SD  + H+
Sbjct: 176 ADHHRLHSPYESPPKNGLDKAFSDVVLYAVPPKGFFPSDSASGSVHSLSSGGSDSVHGHM 235

Query: 182 KGIAADGFRV 211
           K +A D FRV
Sbjct: 236 KAMAVDAFRV 245


>tpg|DAA55791.1| TPA: putative regulator of chromosome condensation (RCC1) family
           protein [Zea mays]
          Length = 964

 Score = 96.3 bits (238), Expect = 2e-18
 Identities = 44/70 (62%), Positives = 54/70 (77%)
 Frame = +2

Query: 2   SDPLRLSSPYDSPPKNGSDKSFSDVILYAIPPRGFFPTDSATGSANSLSSGFSDCANDHV 181
           SD  RL +PY SPPKNG +K+FSDV+LYA+PPRGFFP+DS  GS +S+SSG SD  N H 
Sbjct: 73  SDNYRLRTPYGSPPKNGLEKAFSDVMLYAVPPRGFFPSDSNAGSVHSMSSGQSDNTNGHS 132

Query: 182 KGIAADGFRV 211
           +G+  D FRV
Sbjct: 133 RGVPMDAFRV 142


>ref|XP_002279847.2| PREDICTED: uncharacterized protein LOC100248282 isoform 1 [Vitis
           vinifera]
          Length = 1107

 Score = 95.9 bits (237), Expect = 3e-18
 Identities = 44/69 (63%), Positives = 56/69 (81%)
 Frame = +2

Query: 5   DPLRLSSPYDSPPKNGSDKSFSDVILYAIPPRGFFPTDSATGSANSLSSGFSDCANDHVK 184
           D LRL SPY+SPPK+  +K+FSDVILYA+PP+GFFP+DSA+GS +SLSSG SD  + H+K
Sbjct: 179 DHLRLHSPYESPPKSVMEKAFSDVILYAVPPKGFFPSDSASGSVHSLSSGGSDSVHGHMK 238

Query: 185 GIAADGFRV 211
            +  D FRV
Sbjct: 239 AMTMDAFRV 247