BLASTX nr result

ID: Dioscorea21_contig00034355 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00034355
         (327 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275729.1| PREDICTED: ribulose-1,5 bisphosphate carboxy...    65   6e-09
emb|CBI25318.3| unnamed protein product [Vitis vinifera]               60   1e-07
ref|XP_004167280.1| PREDICTED: LOW QUALITY PROTEIN: sulfate tran...    59   3e-07
ref|XP_004149827.1| PREDICTED: ribulose-1,5 bisphosphate carboxy...    59   3e-07
ref|XP_002878015.1| SET domain-containing protein [Arabidopsis l...    57   1e-06

>ref|XP_002275729.1| PREDICTED: ribulose-1,5 bisphosphate carboxylase/oxygenase large
           subunit N-methyltransferase, chloroplastic-like [Vitis
           vinifera]
          Length = 480

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 30/42 (71%), Positives = 36/42 (85%)
 Frame = +1

Query: 202 DEFLPWLQRKSGSEISSTLLIGFSKFGRSLFASKSIRAGDCI 327
           D+FLPWL++K+G EISS L IG S +GRSLFASKSI+ GDCI
Sbjct: 43  DDFLPWLEQKAGVEISSVLSIGKSTYGRSLFASKSIQTGDCI 84


>emb|CBI25318.3| unnamed protein product [Vitis vinifera]
          Length = 487

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 30/43 (69%), Positives = 36/43 (83%), Gaps = 1/43 (2%)
 Frame = +1

Query: 202 DEFLPWLQRKSGSEISSTLLIGFSKFG-RSLFASKSIRAGDCI 327
           D+FLPWL++K+G EISS L IG S +G RSLFASKSI+ GDCI
Sbjct: 43  DDFLPWLEQKAGVEISSVLSIGKSTYGSRSLFASKSIQTGDCI 85


>ref|XP_004167280.1| PREDICTED: LOW QUALITY PROTEIN: sulfate transporter 4.1,
           chloroplastic-like, partial [Cucumis sativus]
          Length = 923

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 28/42 (66%), Positives = 34/42 (80%)
 Frame = +1

Query: 202 DEFLPWLQRKSGSEISSTLLIGFSKFGRSLFASKSIRAGDCI 327
           D FLPWL+RK+ ++ISS L IG S  GR LFAS++IRAGDCI
Sbjct: 706 DTFLPWLERKAETKISSVLSIGKSSIGRFLFASETIRAGDCI 747


>ref|XP_004149827.1| PREDICTED: ribulose-1,5 bisphosphate carboxylase/oxygenase large
           subunit N-methyltransferase, chloroplastic-like [Cucumis
           sativus]
          Length = 499

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 28/42 (66%), Positives = 34/42 (80%)
 Frame = +1

Query: 202 DEFLPWLQRKSGSEISSTLLIGFSKFGRSLFASKSIRAGDCI 327
           D FLPWL+RK+ ++ISS L IG S  GR LFAS++IRAGDCI
Sbjct: 49  DTFLPWLERKAETKISSVLSIGKSSIGRFLFASETIRAGDCI 90


>ref|XP_002878015.1| SET domain-containing protein [Arabidopsis lyrata subsp. lyrata]
           gi|297323853|gb|EFH54274.1| SET domain-containing
           protein [Arabidopsis lyrata subsp. lyrata]
          Length = 473

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 25/41 (60%), Positives = 35/41 (85%)
 Frame = +1

Query: 205 EFLPWLQRKSGSEISSTLLIGFSKFGRSLFASKSIRAGDCI 327
           +F+PWL+R +G++I++TL IG S +GRSLFASK I AGDC+
Sbjct: 45  DFIPWLERIAGAKITNTLSIGKSTYGRSLFASKVIHAGDCM 85


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