BLASTX nr result

ID: Dioscorea21_contig00034343 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00034343
         (349 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002466585.1| hypothetical protein SORBIDRAFT_01g010380 [S...   158   5e-37
ref|XP_003573448.1| PREDICTED: pentatricopeptide repeat-containi...   155   2e-36
ref|NP_001061056.1| Os08g0162200 [Oryza sativa Japonica Group] g...   155   2e-36
dbj|BAK03698.1| predicted protein [Hordeum vulgare subsp. vulgare]    153   2e-35
ref|NP_001146017.1| uncharacterized protein LOC100279548 [Zea ma...   152   4e-35

>ref|XP_002466585.1| hypothetical protein SORBIDRAFT_01g010380 [Sorghum bicolor]
           gi|241920439|gb|EER93583.1| hypothetical protein
           SORBIDRAFT_01g010380 [Sorghum bicolor]
          Length = 529

 Score =  158 bits (399), Expect = 5e-37
 Identities = 71/116 (61%), Positives = 94/116 (81%)
 Frame = -2

Query: 348 EMLRENIVPNSVTFVGLLAAFKHAGLLQEARRYFSTMWSEHKVKPSVDHYAIMVDLLGRS 169
           EM +  I PN+VTFVGLL+A+ HAGLL+EAR  F++M S++K+ PS++HY IMVD+LGR 
Sbjct: 374 EMSKARIDPNAVTFVGLLSAYSHAGLLEEARACFTSMSSKYKINPSMEHYTIMVDILGRC 433

Query: 168 GSVEEAYRLIKEMPMKPHVGVWGALLQACRLHGNVALGEIAARSCFKLEPESSGYY 1
           G +EEA++LI ++P+ PH  VWGALL ACRLH N+ LGE+AA  CF+LEP+ SGYY
Sbjct: 434 GKLEEAFQLIMQIPVCPHASVWGALLLACRLHNNIELGEVAASKCFELEPKESGYY 489


>ref|XP_003573448.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g22760-like [Brachypodium distachyon]
          Length = 530

 Score =  155 bits (393), Expect = 2e-36
 Identities = 72/116 (62%), Positives = 92/116 (79%)
 Frame = -2

Query: 348 EMLRENIVPNSVTFVGLLAAFKHAGLLQEARRYFSTMWSEHKVKPSVDHYAIMVDLLGRS 169
           EM    IVPN+VTFVGLL+A+ HAGL++EAR  F+ M S++ ++PS++HY IMVDLLGRS
Sbjct: 375 EMSDAKIVPNAVTFVGLLSAYNHAGLMEEARACFAFMSSKYNIRPSMEHYTIMVDLLGRS 434

Query: 168 GSVEEAYRLIKEMPMKPHVGVWGALLQACRLHGNVALGEIAARSCFKLEPESSGYY 1
           G ++EA++LI +MPM+PH  VWGALL ACRLH NV LGE+ A  CF+L P  SGYY
Sbjct: 435 GKLDEAFQLIMKMPMQPHASVWGALLLACRLHTNVELGEMVASKCFELAPGESGYY 490


>ref|NP_001061056.1| Os08g0162200 [Oryza sativa Japonica Group]
           gi|28564637|dbj|BAC57819.1| putative pentatricopeptide
           (PPR) repeat-containing protein [Oryza sativa Japonica
           Group] gi|113623025|dbj|BAF22970.1| Os08g0162200 [Oryza
           sativa Japonica Group] gi|125602282|gb|EAZ41607.1|
           hypothetical protein OsJ_26139 [Oryza sativa Japonica
           Group] gi|215741371|dbj|BAG97866.1| unnamed protein
           product [Oryza sativa Japonica Group]
          Length = 535

 Score =  155 bits (393), Expect = 2e-36
 Identities = 72/116 (62%), Positives = 91/116 (78%)
 Frame = -2

Query: 348 EMLRENIVPNSVTFVGLLAAFKHAGLLQEARRYFSTMWSEHKVKPSVDHYAIMVDLLGRS 169
           EM    I PN+VTFVGLL+A+ +AGL++EAR  F++M  ++K+ PS++HY IMVDLLGRS
Sbjct: 380 EMSDAKISPNAVTFVGLLSAYSNAGLMEEARACFASMTEKYKISPSMEHYTIMVDLLGRS 439

Query: 168 GSVEEAYRLIKEMPMKPHVGVWGALLQACRLHGNVALGEIAARSCFKLEPESSGYY 1
           G ++EAY+LI +MPMKP   +WGALL ACRLH NV LGEI A  CF+LEP  SGYY
Sbjct: 440 GKLDEAYQLIMQMPMKPDASIWGALLLACRLHNNVELGEIVASKCFELEPGESGYY 495


>dbj|BAK03698.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 529

 Score =  153 bits (386), Expect = 2e-35
 Identities = 69/116 (59%), Positives = 93/116 (80%)
 Frame = -2

Query: 348 EMLRENIVPNSVTFVGLLAAFKHAGLLQEARRYFSTMWSEHKVKPSVDHYAIMVDLLGRS 169
           EM   NI+PN+V+FVGLL+A+ HAGL++EAR  F++M S++K++PS++HY IMVDLLGRS
Sbjct: 374 EMSDANILPNAVSFVGLLSAYNHAGLVEEARACFTSMSSKYKIRPSMEHYTIMVDLLGRS 433

Query: 168 GSVEEAYRLIKEMPMKPHVGVWGALLQACRLHGNVALGEIAARSCFKLEPESSGYY 1
           G ++EA++LI +MPM+P   VWGALL +CRLH NV LGE+ A  CF+  P  SGYY
Sbjct: 434 GKLDEAFQLIMQMPMQPRASVWGALLLSCRLHNNVELGEVIASKCFEQAPGESGYY 489


>ref|NP_001146017.1| uncharacterized protein LOC100279548 [Zea mays]
           gi|219885333|gb|ACL53041.1| unknown [Zea mays]
           gi|414872421|tpg|DAA50978.1| TPA: hypothetical protein
           ZEAMMB73_118572 [Zea mays]
          Length = 528

 Score =  152 bits (383), Expect = 4e-35
 Identities = 67/116 (57%), Positives = 91/116 (78%)
 Frame = -2

Query: 348 EMLRENIVPNSVTFVGLLAAFKHAGLLQEARRYFSTMWSEHKVKPSVDHYAIMVDLLGRS 169
           EM +  I PN+VTFVGLL+A+ HAGLL+EAR  F++M S +++ PS++HY IMVD+LGR 
Sbjct: 373 EMSKARIDPNAVTFVGLLSAYSHAGLLEEARACFTSMTSRYRINPSMEHYTIMVDILGRC 432

Query: 168 GSVEEAYRLIKEMPMKPHVGVWGALLQACRLHGNVALGEIAARSCFKLEPESSGYY 1
           G +EEA++L+ ++P+ P   VWGALL ACRLH N+ LGE+ A  CF+LEP+ SGYY
Sbjct: 433 GKLEEAFQLVMQIPVCPDASVWGALLLACRLHNNIELGEVVASKCFELEPQESGYY 488


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