BLASTX nr result

ID: Dioscorea21_contig00034341 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00034341
         (242 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002514001.1| conserved hypothetical protein [Ricinus comm...    70   2e-10
ref|XP_002301078.1| predicted protein [Populus trichocarpa] gi|2...    65   6e-09
emb|CBI38223.3| unnamed protein product [Vitis vinifera]               60   2e-07
ref|XP_002269775.1| PREDICTED: uncharacterized protein LOC100267...    60   2e-07
emb|CAN80154.1| hypothetical protein VITISV_038130 [Vitis vinifera]    60   2e-07

>ref|XP_002514001.1| conserved hypothetical protein [Ricinus communis]
           gi|223547087|gb|EEF48584.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 479

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 34/62 (54%), Positives = 46/62 (74%), Gaps = 3/62 (4%)
 Frame = -1

Query: 179 NETRSKLQDMITFLPLKDLRYTHNPFQVHTTWFMSSINDIQEMDQAHHLYFP---SKGKI 9
           N + SKLQD +TFLPLKDLR+     + +T WFMSS+ND +E ++A +LYFP   SKG++
Sbjct: 75  NRSISKLQDSVTFLPLKDLRFAKTAMESNT-WFMSSLNDTREENEAEYLYFPSEMSKGRL 133

Query: 8   LC 3
           LC
Sbjct: 134 LC 135


>ref|XP_002301078.1| predicted protein [Populus trichocarpa] gi|222842804|gb|EEE80351.1|
           predicted protein [Populus trichocarpa]
          Length = 383

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 31/58 (53%), Positives = 43/58 (74%), Gaps = 3/58 (5%)
 Frame = -1

Query: 167 SKLQDMITFLPLKDLRYTHNPFQVHTTWFMSSINDIQEMDQAHHLYFP---SKGKILC 3
           SKL++ +TFLPLKDLR+     + +T WFMSS+ND  E ++A +LYFP   SKG++LC
Sbjct: 3   SKLRESVTFLPLKDLRFAETAMEGNT-WFMSSLNDTHEANEAEYLYFPSQMSKGRLLC 59


>emb|CBI38223.3| unnamed protein product [Vitis vinifera]
          Length = 471

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 31/70 (44%), Positives = 42/70 (60%), Gaps = 3/70 (4%)
 Frame = -1

Query: 203 SPPCDLVLNETRSKLQDMITFLPLKDLRYTHNPFQVHTTWFMSSINDIQEMDQAHHLYFP 24
           SP C   L+    KL D +TFLPLKDLRY     Q H TWFMSS++D +   +  +  +P
Sbjct: 84  SPNCSHELHALAEKLSDAVTFLPLKDLRYAQTAQQGH-TWFMSSMHDTRVEGEVQYQQYP 142

Query: 23  ---SKGKILC 3
              S+G++LC
Sbjct: 143 SAASRGRLLC 152


>ref|XP_002269775.1| PREDICTED: uncharacterized protein LOC100267753 [Vitis vinifera]
          Length = 491

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 31/70 (44%), Positives = 42/70 (60%), Gaps = 3/70 (4%)
 Frame = -1

Query: 203 SPPCDLVLNETRSKLQDMITFLPLKDLRYTHNPFQVHTTWFMSSINDIQEMDQAHHLYFP 24
           SP C   L+    KL D +TFLPLKDLRY     Q H TWFMSS++D +   +  +  +P
Sbjct: 84  SPNCSHELHALAEKLSDAVTFLPLKDLRYAQTAQQGH-TWFMSSMHDTRVEGEVQYQQYP 142

Query: 23  ---SKGKILC 3
              S+G++LC
Sbjct: 143 SAASRGRLLC 152


>emb|CAN80154.1| hypothetical protein VITISV_038130 [Vitis vinifera]
          Length = 489

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 31/70 (44%), Positives = 42/70 (60%), Gaps = 3/70 (4%)
 Frame = -1

Query: 203 SPPCDLVLNETRSKLQDMITFLPLKDLRYTHNPFQVHTTWFMSSINDIQEMDQAHHLYFP 24
           SP C   L+    KL D +TFLPLKDLRY     Q H TWFMSS++D +   +  +  +P
Sbjct: 82  SPNCSHELHALAEKLSDAVTFLPLKDLRYAQTAQQGH-TWFMSSMHDTRVEGEVQYQQYP 140

Query: 23  ---SKGKILC 3
              S+G++LC
Sbjct: 141 SAASRGRLLC 150


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