BLASTX nr result

ID: Dioscorea21_contig00034335 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00034335
         (204 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002526713.1| conserved hypothetical protein [Ricinus comm...    64   2e-08
gb|ABD63156.1| Retrotransposon gag protein [Asparagus officinalis]     57   2e-06

>ref|XP_002526713.1| conserved hypothetical protein [Ricinus communis]
           gi|223533946|gb|EEF35670.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 496

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 31/66 (46%), Positives = 47/66 (71%), Gaps = 1/66 (1%)
 Frame = -3

Query: 202 DAAAGGSLSNKYPDEAEQLLESMASNESHW-ASRGTPQKGAGIYEVSANDALSARVELLT 26
           DAAAGG+L+NK P++A+ L+E MA N + W +SR  P +   + +V +  AL+A+VELL 
Sbjct: 42  DAAAGGALNNKTPEQAQNLIEEMAMNNNQWQSSRSRPGRQGVVNQVDSTAALAAQVELLA 101

Query: 25  RKLDTL 8
           +K+D L
Sbjct: 102 KKIDQL 107


>gb|ABD63156.1| Retrotransposon gag protein [Asparagus officinalis]
          Length = 275

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 28/65 (43%), Positives = 42/65 (64%)
 Frame = -3

Query: 202 DAAAGGSLSNKYPDEAEQLLESMASNESHWASRGTPQKGAGIYEVSANDALSARVELLTR 23
           DAAAGG+L NK   +A+QL+E MA N   W+   +  K +G Y+V A D +++RV+ L +
Sbjct: 113 DAAAGGALMNKSVRDAKQLIEDMAQNHFQWSGERSLPKKSGRYDVDALDHIASRVDALFQ 172

Query: 22  KLDTL 8
           K D +
Sbjct: 173 KFDKM 177


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