BLASTX nr result
ID: Dioscorea21_contig00034335
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Dioscorea21_contig00034335 (204 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002526713.1| conserved hypothetical protein [Ricinus comm... 64 2e-08 gb|ABD63156.1| Retrotransposon gag protein [Asparagus officinalis] 57 2e-06 >ref|XP_002526713.1| conserved hypothetical protein [Ricinus communis] gi|223533946|gb|EEF35670.1| conserved hypothetical protein [Ricinus communis] Length = 496 Score = 63.5 bits (153), Expect = 2e-08 Identities = 31/66 (46%), Positives = 47/66 (71%), Gaps = 1/66 (1%) Frame = -3 Query: 202 DAAAGGSLSNKYPDEAEQLLESMASNESHW-ASRGTPQKGAGIYEVSANDALSARVELLT 26 DAAAGG+L+NK P++A+ L+E MA N + W +SR P + + +V + AL+A+VELL Sbjct: 42 DAAAGGALNNKTPEQAQNLIEEMAMNNNQWQSSRSRPGRQGVVNQVDSTAALAAQVELLA 101 Query: 25 RKLDTL 8 +K+D L Sbjct: 102 KKIDQL 107 >gb|ABD63156.1| Retrotransposon gag protein [Asparagus officinalis] Length = 275 Score = 57.0 bits (136), Expect = 2e-06 Identities = 28/65 (43%), Positives = 42/65 (64%) Frame = -3 Query: 202 DAAAGGSLSNKYPDEAEQLLESMASNESHWASRGTPQKGAGIYEVSANDALSARVELLTR 23 DAAAGG+L NK +A+QL+E MA N W+ + K +G Y+V A D +++RV+ L + Sbjct: 113 DAAAGGALMNKSVRDAKQLIEDMAQNHFQWSGERSLPKKSGRYDVDALDHIASRVDALFQ 172 Query: 22 KLDTL 8 K D + Sbjct: 173 KFDKM 177