BLASTX nr result

ID: Dioscorea21_contig00034329 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00034329
         (468 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN60449.1| hypothetical protein VITISV_036155 [Vitis vinifera]   115   3e-24
gb|ABN06064.1| RNA-directed DNA polymerase (Reverse transcriptas...   115   3e-24
emb|CAN64437.1| hypothetical protein VITISV_011228 [Vitis vinifera]   115   4e-24
emb|CAE05990.1| OSJNBa0004L19.22 [Oryza sativa Japonica Group]        111   7e-23
emb|CAN75226.1| hypothetical protein VITISV_035857 [Vitis vinifera]   110   9e-23

>emb|CAN60449.1| hypothetical protein VITISV_036155 [Vitis vinifera]
          Length = 647

 Score =  115 bits (289), Expect = 3e-24
 Identities = 51/122 (41%), Positives = 74/122 (60%)
 Frame = +1

Query: 100 YSSHDGLVFFKGRLVIPSDTGLQHLLVAEFHNTPTGGHAGITRTYHRIASTFYWPTLKKT 279
           Y++  GL F+K R+V+P  + + + L+ EFH++P GGH+G+ RTY RIA  FYWP++ + 
Sbjct: 176 YTNRQGLTFYKNRVVVPPQSHIPNQLLREFHDSPLGGHSGVLRTYKRIAQQFYWPSMYRM 235

Query: 280 VREFVRRCSTCQAVKPFNSAXXXXXXXXXXXXHAWESASLDFITHLPASAGKSTILVIVD 459
           V E+V  C  CQ  K    +              W+  ++DFI  LP S GK+TILV+VD
Sbjct: 236 VNEYVSSCDVCQRAKASTLSPAGLLQPLPIPCQVWDDITMDFIEGLPPSQGKNTILVVVD 295

Query: 460 RL 465
           RL
Sbjct: 296 RL 297


>gb|ABN06064.1| RNA-directed DNA polymerase (Reverse transcriptase); Chromo; Zinc
            finger, CCHC-type; Peptidase aspartic, active site;
            Polynucleotidyl transferase, Ribonuclease H fold
            [Medicago truncatula]
          Length = 1297

 Score =  115 bits (289), Expect = 3e-24
 Identities = 57/142 (40%), Positives = 81/142 (57%)
 Frame = +1

Query: 40   NQQAIEFLAAVQADPLAWPDYSSHDGLVFFKGRLVIPSDTGLQHLLVAEFHNTPTGGHAG 219
            + Q  + +  +Q D  + P Y    G++ ++GRLV+ S + +   L+AEFH+TP GGH+G
Sbjct: 820  DSQLQKIIGDLQRDASSRPGYMLKQGVLLYEGRLVVSSKSVMIPTLLAEFHSTPQGGHSG 879

Query: 220  ITRTYHRIASTFYWPTLKKTVREFVRRCSTCQAVKPFNSAXXXXXXXXXXXXHAWESASL 399
              RTY R+A+  YW  +K TV+E+VR C TCQ  K   S+              WE  S+
Sbjct: 880  FYRTYRRLAANVYWVGMKNTVQEYVRSCDTCQRQKYLASSPGGLLQPLPVPDRIWEDLSM 939

Query: 400  DFITHLPASAGKSTILVIVDRL 465
            DFI  LP S G   +LV+VDRL
Sbjct: 940  DFIMGLPKSKGYEAVLVVVDRL 961


>emb|CAN64437.1| hypothetical protein VITISV_011228 [Vitis vinifera]
          Length = 623

 Score =  115 bits (288), Expect = 4e-24
 Identities = 50/122 (40%), Positives = 74/122 (60%)
 Frame = +1

Query: 100 YSSHDGLVFFKGRLVIPSDTGLQHLLVAEFHNTPTGGHAGITRTYHRIASTFYWPTLKKT 279
           Y++  GL F+K R+V+P  + + + L+ EFH++P GGH+G+ RTY RIA  FYWP++ + 
Sbjct: 168 YTNRQGLTFYKNRVVVPPQSHIPNQLLREFHDSPLGGHSGVLRTYKRIAQQFYWPSMYRM 227

Query: 280 VREFVRRCSTCQAVKPFNSAXXXXXXXXXXXXHAWESASLDFITHLPASAGKSTILVIVD 459
           V E++  C  CQ  K    +              W+  ++DFI  LP S GK+TILV+VD
Sbjct: 228 VNEYISSCDVCQRAKASTLSSTGLLQPLPIPCQVWDDITMDFIEGLPPSQGKNTILVVVD 287

Query: 460 RL 465
           RL
Sbjct: 288 RL 289


>emb|CAE05990.1| OSJNBa0004L19.22 [Oryza sativa Japonica Group]
          Length = 1586

 Score =  111 bits (277), Expect = 7e-23
 Identities = 56/155 (36%), Positives = 83/155 (53%)
 Frame = +1

Query: 1    PAILASIKHLYQTNQQAIEFLAAVQADPLAWPDYSSHDGLVFFKGRLVIPSDTGLQHLLV 180
            P  +  I+  Y+ + QA + L+ +  +      YS   GL+ +KGR+ +  +T ++  L+
Sbjct: 1111 PEWVRDIQRSYEGDVQAHKILSLIGTEGDTDGSYSQEAGLLRYKGRIYVGENTEIREELI 1170

Query: 181  AEFHNTPTGGHAGITRTYHRIASTFYWPTLKKTVREFVRRCSTCQAVKPFNSAXXXXXXX 360
              +H++  GGH+G+  TYHRI S FYWP LKK V  F+R C  CQ  K  +         
Sbjct: 1171 RSYHSSAFGGHSGMRATYHRIKSLFYWPGLKKAVEGFIRECPICQVTKAEHIHIPGLLDP 1230

Query: 361  XXXXXHAWESASLDFITHLPASAGKSTILVIVDRL 465
                  AW   ++DF+  LP S GK  ILV+VDRL
Sbjct: 1231 LEVPDMAWAHITMDFVEGLPKSNGKDVILVVVDRL 1265


>emb|CAN75226.1| hypothetical protein VITISV_035857 [Vitis vinifera]
          Length = 422

 Score =  110 bits (276), Expect = 9e-23
 Identities = 52/122 (42%), Positives = 76/122 (62%)
 Frame = +1

Query: 100 YSSHDGLVFFKGRLVIPSDTGLQHLLVAEFHNTPTGGHAGITRTYHRIASTFYWPTLKKT 279
           Y+  +GLV +K R+VIP ++ +   L+ EFH++P GGH+G+ RTY R+A  FYWP++ + 
Sbjct: 16  YTWRNGLVCYKNRVVIPLNSPIIKQLLREFHDSPIGGHSGVLRTYKRLAQQFYWPSMFQI 75

Query: 280 VREFVRRCSTCQAVKPFNSAXXXXXXXXXXXXHAWESASLDFITHLPASAGKSTILVIVD 459
           V+++V  C  CQ VK    A              W+  ++DFI  LP S GK+TILV+VD
Sbjct: 76  VQDYVSSCDVCQRVKSETLAPAGLLQPLPIPCLVWDDITMDFIEGLPTSNGKNTILVVVD 135

Query: 460 RL 465
           RL
Sbjct: 136 RL 137


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