BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00034321
         (220 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABA95797.1| retrotransposon protein, putative, unclassified [...    68   7e-10
gb|AAP21414.1| putative polyprotein [Oryza sativa Japonica Group...    66   3e-09
gb|ABA93731.1| retrotransposon protein, putative, unclassified [...    64   2e-08
ref|NP_001061911.1| Os08g0441700 [Oryza sativa Japonica Group] g...    64   2e-08

>gb|ABA95797.1| retrotransposon protein, putative, unclassified [Oryza sativa
           Japonica Group]
          Length = 1588

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 35/67 (52%), Positives = 44/67 (65%), Gaps = 6/67 (8%)
 Frame = -2

Query: 183 KGKGQVTQDLDNA-----TCFGNFVGYAHANKGTQVQALAST-KTHVDWIIDSGASRHIT 22
           K KG V  +  N+     + FGNF  YAH  +GTQ  ALAST + HVDWIIDSGAS+H+T
Sbjct: 384 KNKGPVDSNQQNSAKATTSHFGNFANYAHTGEGTQAHALASTYRHHVDWIIDSGASKHVT 443

Query: 21  GSSSEFA 1
           G  + F+
Sbjct: 444 GLPNNFS 450


>gb|AAP21414.1| putative polyprotein [Oryza sativa Japonica Group]
           gi|108711651|gb|ABF99446.1| retrotransposon protein,
           putative, unclassified [Oryza sativa Japonica Group]
          Length = 1393

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 31/59 (52%), Positives = 39/59 (66%), Gaps = 1/59 (1%)
 Frame = -2

Query: 177 KGQVTQDLDNATCFGNFVGYAHANKGTQVQALASTKTH-VDWIIDSGASRHITGSSSEF 4
           K +  +  +  T FGNF  YA   +GTQ QALAST  H +DWIIDSGAS+H+TG  + F
Sbjct: 363 KNKTNESSNTTTHFGNFANYAQVGEGTQAQALASTYRHPIDWIIDSGASKHVTGLHNTF 421


>gb|ABA93731.1| retrotransposon protein, putative, unclassified [Oryza sativa
           Japonica Group]
          Length = 639

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 30/59 (50%), Positives = 38/59 (64%), Gaps = 1/59 (1%)
 Frame = -2

Query: 177 KGQVTQDLDNATCFGNFVGYAHANKGTQVQALASTKTH-VDWIIDSGASRHITGSSSEF 4
           K +  +  +  T FGNF  YA   +GTQ QALAST  H +DWIID GAS+H+TG  + F
Sbjct: 380 KNKTNESSNTTTHFGNFANYAQVGEGTQAQALASTYRHPIDWIIDLGASKHVTGLHNTF 438


>ref|NP_001061911.1| Os08g0441700 [Oryza sativa Japonica Group]
           gi|113623880|dbj|BAF23825.1| Os08g0441700, partial
           [Oryza sativa Japonica Group]
          Length = 309

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 30/59 (50%), Positives = 38/59 (64%), Gaps = 1/59 (1%)
 Frame = -2

Query: 177 KGQVTQDLDNATCFGNFVGYAHANKGTQVQALASTKTH-VDWIIDSGASRHITGSSSEF 4
           K ++ +  +  T FGNF  YA   +G Q QALAST  H +DWIIDSGAS+H TG  + F
Sbjct: 70  KNKINESSNTTTHFGNFANYAQVGEGIQAQALASTYRHPIDWIIDSGASKHFTGLHNTF 128