BLASTX nr result

ID: Dioscorea21_contig00034297 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00034297
         (237 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001064098.1| Os10g0130700 [Oryza sativa Japonica Group] g...   110   9e-23
emb|CAH66624.1| OSIGBa0115A19.5 [Oryza sativa Indica Group]           110   9e-23
gb|AAG50698.1|AC079604_5 copia-type polyprotein, putative [Arabi...   110   1e-22
gb|ABF94034.1| retrotransposon protein, putative, unclassified [...   110   1e-22
emb|CAA69272.1| lectin receptor kinase [Arabidopsis thaliana]         110   2e-22

>ref|NP_001064098.1| Os10g0130700 [Oryza sativa Japonica Group]
            gi|20514806|gb|AAM23251.1|AC092553_17 Putative pol
            polyprotein [Oryza sativa Japonica Group]
            gi|21326494|gb|AAM47622.1|AC122147_11 Putative pol
            polyprotein [Oryza sativa Japonica Group]
            gi|31430018|gb|AAP51989.1| retrotransposon protein,
            putative, Ty1-copia subclass, expressed [Oryza sativa
            Japonica Group] gi|113638707|dbj|BAF26012.1| Os10g0130700
            [Oryza sativa Japonica Group]
          Length = 1426

 Score =  110 bits (276), Expect = 9e-23
 Identities = 51/78 (65%), Positives = 65/78 (83%)
 Frame = -1

Query: 234  ARLVARGYSQVSGVDFDEVFSPVARLETVRLFLAVAAQKHWQVFLLDVKSAFLNGELREE 55
            ARLVA+GY Q  G+DF+EVF+PVAR+ETVRL +AVAA K W++  +DVKSAFLNG+L EE
Sbjct: 977  ARLVAKGYVQQQGIDFEEVFAPVARMETVRLLIAVAANKGWEIHHMDVKSAFLNGDLEEE 1036

Query: 54   IYVMQPQGYIQPGNEGLV 1
            +YV+QP G+I+ G EG V
Sbjct: 1037 VYVVQPPGFIEKGKEGQV 1054


>emb|CAH66624.1| OSIGBa0115A19.5 [Oryza sativa Indica Group]
          Length = 1426

 Score =  110 bits (276), Expect = 9e-23
 Identities = 51/78 (65%), Positives = 65/78 (83%)
 Frame = -1

Query: 234  ARLVARGYSQVSGVDFDEVFSPVARLETVRLFLAVAAQKHWQVFLLDVKSAFLNGELREE 55
            ARLVA+GY Q  G+DF+EVF+PVAR+ETVRL +AVAA K W++  +DVKSAFLNG+L EE
Sbjct: 977  ARLVAKGYVQQQGIDFEEVFAPVARMETVRLLIAVAANKGWEIHHMDVKSAFLNGDLEEE 1036

Query: 54   IYVMQPQGYIQPGNEGLV 1
            +YV+QP G+I+ G EG V
Sbjct: 1037 VYVVQPPGFIEKGKEGQV 1054


>gb|AAG50698.1|AC079604_5 copia-type polyprotein, putative [Arabidopsis thaliana]
            gi|12321387|gb|AAG50765.1|AC079131_10 copia-type
            polyprotein, putative [Arabidopsis thaliana]
          Length = 1320

 Score =  110 bits (275), Expect = 1e-22
 Identities = 51/78 (65%), Positives = 65/78 (83%)
 Frame = -1

Query: 234  ARLVARGYSQVSGVDFDEVFSPVARLETVRLFLAVAAQKHWQVFLLDVKSAFLNGELREE 55
            ARLVA+GYSQ +G+D+DEVF+PVARLETVRL +++AAQ  W++  +DVKSAFLNG+L EE
Sbjct: 868  ARLVAKGYSQRAGIDYDEVFAPVARLETVRLIISLAAQNKWKIHQMDVKSAFLNGDLEEE 927

Query: 54   IYVMQPQGYIQPGNEGLV 1
            +Y+ QPQGYI  G E  V
Sbjct: 928  VYIEQPQGYIVKGEEDKV 945


>gb|ABF94034.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1409

 Score =  110 bits (275), Expect = 1e-22
 Identities = 54/78 (69%), Positives = 64/78 (82%)
 Frame = -1

Query: 234  ARLVARGYSQVSGVDFDEVFSPVARLETVRLFLAVAAQKHWQVFLLDVKSAFLNGELREE 55
            ARLVA+GY Q  GVDF+EVF+PVARL+TVR+ LAVAA + WQV  LDVKSAFLNGEL EE
Sbjct: 959  ARLVAKGYVQKQGVDFEEVFAPVARLDTVRVVLAVAADRRWQVHHLDVKSAFLNGELEEE 1018

Query: 54   IYVMQPQGYIQPGNEGLV 1
            +YV QP+G+ + G E LV
Sbjct: 1019 VYVAQPEGFARSGKEHLV 1036


>emb|CAA69272.1| lectin receptor kinase [Arabidopsis thaliana]
          Length = 623

 Score =  110 bits (274), Expect = 2e-22
 Identities = 50/78 (64%), Positives = 65/78 (83%)
 Frame = -1

Query: 234 ARLVARGYSQVSGVDFDEVFSPVARLETVRLFLAVAAQKHWQVFLLDVKSAFLNGELREE 55
           ARLVA+GYSQ +G+D+DE+F+PVARLETVRL +++AAQ  W++  +DVKSAFLNG+L EE
Sbjct: 397 ARLVAKGYSQRAGIDYDEIFAPVARLETVRLIISLAAQNKWKIHQMDVKSAFLNGDLEEE 456

Query: 54  IYVMQPQGYIQPGNEGLV 1
           +Y+ QPQGYI  G E  V
Sbjct: 457 VYIEQPQGYIVKGEEDKV 474


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