BLASTX nr result

ID: Dioscorea21_contig00034289 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00034289
         (366 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002311358.1| predicted protein [Populus trichocarpa] gi|2...   129   3e-28
ref|XP_002512482.1| ATP-binding cassette transporter, putative [...   127   9e-28
sp|Q5W274.1|PDR3_TOBAC RecName: Full=Pleiotropic drug resistance...   121   5e-26
ref|XP_002334346.1| predicted protein [Populus trichocarpa] gi|2...   120   9e-26
ref|XP_002314994.1| predicted protein [Populus trichocarpa] gi|2...   120   1e-25

>ref|XP_002311358.1| predicted protein [Populus trichocarpa] gi|222851178|gb|EEE88725.1|
            predicted protein [Populus trichocarpa]
          Length = 1459

 Score =  129 bits (323), Expect = 3e-28
 Identities = 58/83 (69%), Positives = 69/83 (83%)
 Frame = +3

Query: 3    WIWFYYIMPMSWILNALFASQYGDIQKEITVSGETKSVAIFLQDYFGFHYDRLGLVALIL 182
            WIW YYI P SW LN LF SQYGD++KEITV G+TKSVA FLQDYFGFH + L +VA++L
Sbjct: 1377 WIWLYYISPTSWQLNGLFTSQYGDLEKEITVFGQTKSVAAFLQDYFGFHRNFLSVVAVVL 1436

Query: 183  LVFPFSFASLFAYCIGKLNFQRR 251
            ++FP  FASLFAY IG+LNFQ+R
Sbjct: 1437 IIFPIIFASLFAYFIGRLNFQKR 1459


>ref|XP_002512482.1| ATP-binding cassette transporter, putative [Ricinus communis]
            gi|223548443|gb|EEF49934.1| ATP-binding cassette
            transporter, putative [Ricinus communis]
          Length = 1458

 Score =  127 bits (319), Expect = 9e-28
 Identities = 55/83 (66%), Positives = 69/83 (83%)
 Frame = +3

Query: 3    WIWFYYIMPMSWILNALFASQYGDIQKEITVSGETKSVAIFLQDYFGFHYDRLGLVALIL 182
            WIW YY+ P SW+LN +  SQ+GDI KEI+V GETK+V+ FL+DYFGFH++ LG+V  +L
Sbjct: 1359 WIWLYYMCPTSWVLNGMLTSQFGDIDKEISVFGETKTVSAFLEDYFGFHHNFLGVVGAVL 1418

Query: 183  LVFPFSFASLFAYCIGKLNFQRR 251
            ++FPF FASLFAY IGKLNFQRR
Sbjct: 1419 VIFPFVFASLFAYFIGKLNFQRR 1441


>sp|Q5W274.1|PDR3_TOBAC RecName: Full=Pleiotropic drug resistance protein 3; AltName:
            Full=NtPDR3 gi|55056942|emb|CAH39853.1| PDR-like ABC
            transporter [Nicotiana tabacum]
          Length = 1447

 Score =  121 bits (304), Expect = 5e-26
 Identities = 54/83 (65%), Positives = 66/83 (79%)
 Frame = +3

Query: 3    WIWFYYIMPMSWILNALFASQYGDIQKEITVSGETKSVAIFLQDYFGFHYDRLGLVALIL 182
            WIWFYY+ P SW LN +  SQYGDI+KEITV  E K+VA FL DYFGFH+++L +VA +L
Sbjct: 1365 WIWFYYLTPTSWTLNGMLTSQYGDIEKEITVFQEKKTVAAFLGDYFGFHHNQLPIVAFVL 1424

Query: 183  LVFPFSFASLFAYCIGKLNFQRR 251
            + +P  FASLFA+ IGKLNFQRR
Sbjct: 1425 IAYPLVFASLFAFFIGKLNFQRR 1447


>ref|XP_002334346.1| predicted protein [Populus trichocarpa] gi|222871385|gb|EEF08516.1|
           predicted protein [Populus trichocarpa]
          Length = 381

 Score =  120 bits (302), Expect = 9e-26
 Identities = 53/83 (63%), Positives = 63/83 (75%)
 Frame = +3

Query: 3   WIWFYYIMPMSWILNALFASQYGDIQKEITVSGETKSVAIFLQDYFGFHYDRLGLVALIL 182
           WIW YY+ P SW LN    SQYGDI KEI++ GE K+V+ FLQDY+GF +D LG+VA +L
Sbjct: 299 WIWCYYLCPTSWSLNGFLTSQYGDIDKEISIFGELKTVSSFLQDYYGFRHDHLGIVAAVL 358

Query: 183 LVFPFSFASLFAYCIGKLNFQRR 251
             FP +FA LFAYCIGK NFQRR
Sbjct: 359 AAFPVAFAFLFAYCIGKSNFQRR 381


>ref|XP_002314994.1| predicted protein [Populus trichocarpa] gi|222864034|gb|EEF01165.1|
            predicted protein [Populus trichocarpa]
          Length = 1362

 Score =  120 bits (300), Expect = 1e-25
 Identities = 53/83 (63%), Positives = 62/83 (74%)
 Frame = +3

Query: 3    WIWFYYIMPMSWILNALFASQYGDIQKEITVSGETKSVAIFLQDYFGFHYDRLGLVALIL 182
            WIW YY+ P SW LN    SQYGDI KEI + GE K+V+ FLQDY+GF +D LG+VA +L
Sbjct: 1280 WIWCYYLCPTSWSLNGFLTSQYGDIDKEILIFGELKTVSSFLQDYYGFRHDHLGIVAAVL 1339

Query: 183  LVFPFSFASLFAYCIGKLNFQRR 251
              FP +FA LFAYCIGK NFQRR
Sbjct: 1340 AAFPVAFALLFAYCIGKSNFQRR 1362


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