BLASTX nr result

ID: Dioscorea21_contig00034265 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00034265
         (200 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266658.1| PREDICTED: uncharacterized protein LOC100261...    63   3e-08
emb|CAN77692.1| hypothetical protein VITISV_030205 [Vitis vinifera]    63   3e-08
ref|NP_974123.1| cobalt ion binding protein [Arabidopsis thalian...    56   3e-06
ref|NP_177287.1| cobalt ion binding protein [Arabidopsis thalian...    56   3e-06
ref|XP_003564758.1| PREDICTED: uncharacterized protein LOC100842...    56   3e-06

>ref|XP_002266658.1| PREDICTED: uncharacterized protein LOC100261996 [Vitis vinifera]
           gi|297734753|emb|CBI16987.3| unnamed protein product
           [Vitis vinifera]
          Length = 188

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 34/66 (51%), Positives = 46/66 (69%), Gaps = 1/66 (1%)
 Frame = +2

Query: 5   ASSRLYATAKSVPTRLRFATPSAEDDEAD-AIPSEGISRPLSEVLRELNKKVPDSVIKVR 181
           +S R YA A S   R+    P  E +  D  +P+ GISRPLSE+L+EL+KKVPD+++KVR
Sbjct: 27  SSLRSYAKA-SQKERVIVPEPEPEPERLDDVVPTSGISRPLSEILKELSKKVPDTLVKVR 85

Query: 182 TEDNFA 199
           TED F+
Sbjct: 86  TEDGFS 91


>emb|CAN77692.1| hypothetical protein VITISV_030205 [Vitis vinifera]
          Length = 227

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 34/66 (51%), Positives = 46/66 (69%), Gaps = 1/66 (1%)
 Frame = +2

Query: 5   ASSRLYATAKSVPTRLRFATPSAEDDEAD-AIPSEGISRPLSEVLRELNKKVPDSVIKVR 181
           +S R YA A S   R+    P  E +  D  +P+ GISRPLSE+L+EL+KKVPD+++KVR
Sbjct: 27  SSLRSYAKA-SQKERVIVPEPEPEPERLDDVVPTSGISRPLSEILKELSKKVPDTLVKVR 85

Query: 182 TEDNFA 199
           TED F+
Sbjct: 86  TEDGFS 91


>ref|NP_974123.1| cobalt ion binding protein [Arabidopsis thaliana]
           gi|332197067|gb|AEE35188.1| cobalt ion binding protein
           [Arabidopsis thaliana]
          Length = 165

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 27/46 (58%), Positives = 35/46 (76%)
 Frame = +2

Query: 53  RFATPSAEDDEADAIPSEGISRPLSEVLRELNKKVPDSVIKVRTED 190
           RF+T +  D     +P+ GISRPL+E+L+ELNKKVPDSVI+ R ED
Sbjct: 36  RFSTETEND-----VPTSGISRPLAEILKELNKKVPDSVIRTRVED 76


>ref|NP_177287.1| cobalt ion binding protein [Arabidopsis thaliana]
           gi|30698791|ref|NP_849876.1| cobalt ion binding protein
           [Arabidopsis thaliana]
           gi|12323832|gb|AAG51886.1|AC016162_7 hypothetical
           protein; 63020-64147 [Arabidopsis thaliana]
           gi|22135986|gb|AAM91575.1| unknown protein [Arabidopsis
           thaliana] gi|23198344|gb|AAN15699.1| unknown protein
           [Arabidopsis thaliana] gi|332197065|gb|AEE35186.1|
           cobalt ion binding protein [Arabidopsis thaliana]
           gi|332197066|gb|AEE35187.1| cobalt ion binding protein
           [Arabidopsis thaliana]
          Length = 176

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 27/46 (58%), Positives = 35/46 (76%)
 Frame = +2

Query: 53  RFATPSAEDDEADAIPSEGISRPLSEVLRELNKKVPDSVIKVRTED 190
           RF+T +  D     +P+ GISRPL+E+L+ELNKKVPDSVI+ R ED
Sbjct: 36  RFSTETEND-----VPTSGISRPLAEILKELNKKVPDSVIRTRVED 76


>ref|XP_003564758.1| PREDICTED: uncharacterized protein LOC100842020 [Brachypodium
           distachyon]
          Length = 187

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 27/49 (55%), Positives = 37/49 (75%), Gaps = 6/49 (12%)
 Frame = +2

Query: 65  PSAEDDEAD------AIPSEGISRPLSEVLRELNKKVPDSVIKVRTEDN 193
           P +E++E D      A P+EGIS+PL++VLREL K+VPDS++K R EDN
Sbjct: 39  PLSEEEEDDFSGGVEAAPTEGISKPLADVLRELGKRVPDSLVKTRLEDN 87


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