BLASTX nr result

ID: Dioscorea21_contig00034260 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00034260
         (284 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABW74566.1| integrase [Boechera divaricarpa]                        84   9e-15
gb|AAT38758.1| Putative gag-pol polyprotein, identical [Solanum ...    83   3e-14
emb|CAN79116.1| hypothetical protein VITISV_002093 [Vitis vinifera]    79   3e-13
emb|CAN72676.1| hypothetical protein VITISV_020406 [Vitis vinifera]    77   1e-12
emb|CAN71759.1| hypothetical protein VITISV_020777 [Vitis vinifera]    76   3e-12

>gb|ABW74566.1| integrase [Boechera divaricarpa]
          Length = 1165

 Score = 84.3 bits (207), Expect = 9e-15
 Identities = 44/94 (46%), Positives = 59/94 (62%)
 Frame = -1

Query: 284 GSVAVTIEGGETKLIHNVQYVPSLAHNLLSVGQLLANGYNVAFEGDKCSIKDAAIGVRLM 105
           G VAV    G  KLI+ V Y+P LAHNLLSVGQ++ N  +V F+G++C IK+   GV L 
Sbjct: 189 GVVAVHNGHGNLKLIYGVYYIPDLAHNLLSVGQMVENNCSVLFDGNECVIKEKKSGVTLA 248

Query: 104 VIQKNRNNLFPVEFSRVGQVNSAVTVADTSILWH 3
           +++K  NNL+P+E S V        V+D S L H
Sbjct: 249 MVKKTSNNLYPLEMSSVETKALVAKVSDISKLLH 282


>gb|AAT38758.1| Putative gag-pol polyprotein, identical [Solanum demissum]
          Length = 1333

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 39/94 (41%), Positives = 57/94 (60%)
 Frame = -1

Query: 284 GSVAVTIEGGETKLIHNVQYVPSLAHNLLSVGQLLANGYNVAFEGDKCSIKDAAIGVRLM 105
           G+V +    G  K +++VQYVP+LAHNLLSVGQL+ +GY+V F  + C IKD   G  + 
Sbjct: 353 GTVEIKTVQGNVKFLYDVQYVPTLAHNLLSVGQLMTSGYSVVFYDNACDIKDKESGRTIA 412

Query: 104 VIQKNRNNLFPVEFSRVGQVNSAVTVADTSILWH 3
            +   +N +FP++ S VG     V   + + LWH
Sbjct: 413 RVPMTQNKMFPLDISNVGNSALVVKEKNETNLWH 446


>emb|CAN79116.1| hypothetical protein VITISV_002093 [Vitis vinifera]
          Length = 1109

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 39/94 (41%), Positives = 56/94 (59%)
 Frame = -1

Query: 284 GSVAVTIEGGETKLIHNVQYVPSLAHNLLSVGQLLANGYNVAFEGDKCSIKDAAIGVRLM 105
           G+VAV    G  KL++NV ++PSL  NLLSVGQL+ +GY++ F+G  C IKD      ++
Sbjct: 334 GTVAVNNGHGNVKLLYNVYFIPSLTQNLLSVGQLMVSGYSILFDGSTCVIKDKKFDQIIV 393

Query: 104 VIQKNRNNLFPVEFSRVGQVNSAVTVADTSILWH 3
            ++   N LFP+E S + +    V     S LWH
Sbjct: 394 DVRMAANKLFPLEVSSIEKHALVVKETSESNLWH 427


>emb|CAN72676.1| hypothetical protein VITISV_020406 [Vitis vinifera]
          Length = 1183

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 39/94 (41%), Positives = 55/94 (58%)
 Frame = -1

Query: 284 GSVAVTIEGGETKLIHNVQYVPSLAHNLLSVGQLLANGYNVAFEGDKCSIKDAAIGVRLM 105
           G+VAV    G  KL++NV ++PSL  NLLSVGQL+ +GY++ F+G  C IKD      + 
Sbjct: 282 GTVAVNNGHGNVKLLYNVYFIPSLTQNLLSVGQLMVSGYSILFDGATCVIKDKKSDQIIF 341

Query: 104 VIQKNRNNLFPVEFSRVGQVNSAVTVADTSILWH 3
            ++   N LFP+E S + +    V     S LWH
Sbjct: 342 DVRMAANKLFPLEVSSIEKHALVVKETSESNLWH 375


>emb|CAN71759.1| hypothetical protein VITISV_020777 [Vitis vinifera]
          Length = 1472

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 38/94 (40%), Positives = 55/94 (58%)
 Frame = -1

Query: 284 GSVAVTIEGGETKLIHNVQYVPSLAHNLLSVGQLLANGYNVAFEGDKCSIKDAAIGVRLM 105
           G+ AV    G  KL++NV ++PSL  NLLSVGQL+ +GY++ F+G  C IKD      ++
Sbjct: 333 GTXAVNNGHGNVKLLYNVYFIPSLTQNLLSVGQLMVSGYSILFDGATCVIKDKKSDQIIV 392

Query: 104 VIQKNRNNLFPVEFSRVGQVNSAVTVADTSILWH 3
            ++   N LFP+E S + +    V     S LWH
Sbjct: 393 BVRMAANKLFPLEVSSIEKHALVVKETSESNLWH 426


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