BLASTX nr result
ID: Dioscorea21_contig00034260
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Dioscorea21_contig00034260 (284 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|ABW74566.1| integrase [Boechera divaricarpa] 84 9e-15 gb|AAT38758.1| Putative gag-pol polyprotein, identical [Solanum ... 83 3e-14 emb|CAN79116.1| hypothetical protein VITISV_002093 [Vitis vinifera] 79 3e-13 emb|CAN72676.1| hypothetical protein VITISV_020406 [Vitis vinifera] 77 1e-12 emb|CAN71759.1| hypothetical protein VITISV_020777 [Vitis vinifera] 76 3e-12 >gb|ABW74566.1| integrase [Boechera divaricarpa] Length = 1165 Score = 84.3 bits (207), Expect = 9e-15 Identities = 44/94 (46%), Positives = 59/94 (62%) Frame = -1 Query: 284 GSVAVTIEGGETKLIHNVQYVPSLAHNLLSVGQLLANGYNVAFEGDKCSIKDAAIGVRLM 105 G VAV G KLI+ V Y+P LAHNLLSVGQ++ N +V F+G++C IK+ GV L Sbjct: 189 GVVAVHNGHGNLKLIYGVYYIPDLAHNLLSVGQMVENNCSVLFDGNECVIKEKKSGVTLA 248 Query: 104 VIQKNRNNLFPVEFSRVGQVNSAVTVADTSILWH 3 +++K NNL+P+E S V V+D S L H Sbjct: 249 MVKKTSNNLYPLEMSSVETKALVAKVSDISKLLH 282 >gb|AAT38758.1| Putative gag-pol polyprotein, identical [Solanum demissum] Length = 1333 Score = 82.8 bits (203), Expect = 3e-14 Identities = 39/94 (41%), Positives = 57/94 (60%) Frame = -1 Query: 284 GSVAVTIEGGETKLIHNVQYVPSLAHNLLSVGQLLANGYNVAFEGDKCSIKDAAIGVRLM 105 G+V + G K +++VQYVP+LAHNLLSVGQL+ +GY+V F + C IKD G + Sbjct: 353 GTVEIKTVQGNVKFLYDVQYVPTLAHNLLSVGQLMTSGYSVVFYDNACDIKDKESGRTIA 412 Query: 104 VIQKNRNNLFPVEFSRVGQVNSAVTVADTSILWH 3 + +N +FP++ S VG V + + LWH Sbjct: 413 RVPMTQNKMFPLDISNVGNSALVVKEKNETNLWH 446 >emb|CAN79116.1| hypothetical protein VITISV_002093 [Vitis vinifera] Length = 1109 Score = 79.3 bits (194), Expect = 3e-13 Identities = 39/94 (41%), Positives = 56/94 (59%) Frame = -1 Query: 284 GSVAVTIEGGETKLIHNVQYVPSLAHNLLSVGQLLANGYNVAFEGDKCSIKDAAIGVRLM 105 G+VAV G KL++NV ++PSL NLLSVGQL+ +GY++ F+G C IKD ++ Sbjct: 334 GTVAVNNGHGNVKLLYNVYFIPSLTQNLLSVGQLMVSGYSILFDGSTCVIKDKKFDQIIV 393 Query: 104 VIQKNRNNLFPVEFSRVGQVNSAVTVADTSILWH 3 ++ N LFP+E S + + V S LWH Sbjct: 394 DVRMAANKLFPLEVSSIEKHALVVKETSESNLWH 427 >emb|CAN72676.1| hypothetical protein VITISV_020406 [Vitis vinifera] Length = 1183 Score = 77.4 bits (189), Expect = 1e-12 Identities = 39/94 (41%), Positives = 55/94 (58%) Frame = -1 Query: 284 GSVAVTIEGGETKLIHNVQYVPSLAHNLLSVGQLLANGYNVAFEGDKCSIKDAAIGVRLM 105 G+VAV G KL++NV ++PSL NLLSVGQL+ +GY++ F+G C IKD + Sbjct: 282 GTVAVNNGHGNVKLLYNVYFIPSLTQNLLSVGQLMVSGYSILFDGATCVIKDKKSDQIIF 341 Query: 104 VIQKNRNNLFPVEFSRVGQVNSAVTVADTSILWH 3 ++ N LFP+E S + + V S LWH Sbjct: 342 DVRMAANKLFPLEVSSIEKHALVVKETSESNLWH 375 >emb|CAN71759.1| hypothetical protein VITISV_020777 [Vitis vinifera] Length = 1472 Score = 75.9 bits (185), Expect = 3e-12 Identities = 38/94 (40%), Positives = 55/94 (58%) Frame = -1 Query: 284 GSVAVTIEGGETKLIHNVQYVPSLAHNLLSVGQLLANGYNVAFEGDKCSIKDAAIGVRLM 105 G+ AV G KL++NV ++PSL NLLSVGQL+ +GY++ F+G C IKD ++ Sbjct: 333 GTXAVNNGHGNVKLLYNVYFIPSLTQNLLSVGQLMVSGYSILFDGATCVIKDKKSDQIIV 392 Query: 104 VIQKNRNNLFPVEFSRVGQVNSAVTVADTSILWH 3 ++ N LFP+E S + + V S LWH Sbjct: 393 BVRMAANKLFPLEVSSIEKHALVVKETSESNLWH 426