BLASTX nr result

ID: Dioscorea21_contig00034257 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00034257
         (373 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI28115.3| unnamed protein product [Vitis vinifera]              105   3e-21
ref|XP_002281524.1| PREDICTED: uncharacterized protein LOC100245...   105   3e-21
ref|XP_002863137.1| hypothetical protein ARALYDRAFT_497045 [Arab...   104   9e-21
ref|NP_193073.1| uncharacterized protein [Arabidopsis thaliana] ...   103   1e-20
ref|XP_002324965.1| predicted protein [Populus trichocarpa] gi|2...    99   5e-19

>emb|CBI28115.3| unnamed protein product [Vitis vinifera]
          Length = 662

 Score =  105 bits (263), Expect = 3e-21
 Identities = 62/102 (60%), Positives = 71/102 (69%)
 Frame = -2

Query: 372 GIVPVPGGADDLWPARGFYLQLSDSLNSTYVSLSDPDADAILSSRSQLGQLVHVARLHPA 193
           GIVP   G+D LWP  GFY+QLSDSLNSTYVSLSD D D IL++R QLGQ V+V R    
Sbjct: 35  GIVPALAGSD-LWPNHGFYVQLSDSLNSTYVSLSDRDTDLILTNRLQLGQFVYVDRFDFD 93

Query: 192 HPVPRASGVRIIPPGRPLPFAGRPEPLLALSDPSRPDGFLIQ 67
            PVPR  G+R I  GR  PF G PEPL+A   PS+ D F+IQ
Sbjct: 94  SPVPRVCGIRPI-AGRH-PFVGSPEPLIARISPSKKD-FVIQ 132


>ref|XP_002281524.1| PREDICTED: uncharacterized protein LOC100245597 [Vitis vinifera]
          Length = 710

 Score =  105 bits (263), Expect = 3e-21
 Identities = 62/102 (60%), Positives = 71/102 (69%)
 Frame = -2

Query: 372 GIVPVPGGADDLWPARGFYLQLSDSLNSTYVSLSDPDADAILSSRSQLGQLVHVARLHPA 193
           GIVP   G+D LWP  GFY+QLSDSLNSTYVSLSD D D IL++R QLGQ V+V R    
Sbjct: 35  GIVPALAGSD-LWPNHGFYVQLSDSLNSTYVSLSDRDTDLILTNRLQLGQFVYVDRFDFD 93

Query: 192 HPVPRASGVRIIPPGRPLPFAGRPEPLLALSDPSRPDGFLIQ 67
            PVPR  G+R I  GR  PF G PEPL+A   PS+ D F+IQ
Sbjct: 94  SPVPRVCGIRPI-AGRH-PFVGSPEPLIARISPSKKD-FVIQ 132


>ref|XP_002863137.1| hypothetical protein ARALYDRAFT_497045 [Arabidopsis lyrata subsp.
           lyrata] gi|297308971|gb|EFH39396.1| hypothetical protein
           ARALYDRAFT_497045 [Arabidopsis lyrata subsp. lyrata]
          Length = 672

 Score =  104 bits (259), Expect = 9e-21
 Identities = 56/102 (54%), Positives = 70/102 (68%)
 Frame = -2

Query: 372 GIVPVPGGADDLWPARGFYLQLSDSLNSTYVSLSDPDADAILSSRSQLGQLVHVARLHPA 193
           GIVP   G+D LWP +GFY+Q+SDSLNSTYVSLS+ D D IL++R QLGQ +++ RL  A
Sbjct: 35  GIVPALAGSD-LWPNQGFYVQISDSLNSTYVSLSERDTDLILTNRLQLGQFIYLERLEFA 93

Query: 192 HPVPRASGVRIIPPGRPLPFAGRPEPLLALSDPSRPDGFLIQ 67
            PVPRA+G+R  P      F G PEPL+A   P     F+IQ
Sbjct: 94  TPVPRAAGIR--PVAGRHAFVGTPEPLIARVSPGSKRDFVIQ 133


>ref|NP_193073.1| uncharacterized protein [Arabidopsis thaliana]
           gi|4584542|emb|CAB40772.1| putative protein [Arabidopsis
           thaliana] gi|7268040|emb|CAB78379.1| putative protein
           [Arabidopsis thaliana] gi|26449344|dbj|BAC41799.1|
           unknown protein [Arabidopsis thaliana]
           gi|29029014|gb|AAO64886.1| At4g13370 [Arabidopsis
           thaliana] gi|332657871|gb|AEE83271.1| uncharacterized
           protein [Arabidopsis thaliana]
          Length = 673

 Score =  103 bits (257), Expect = 1e-20
 Identities = 59/103 (57%), Positives = 76/103 (73%), Gaps = 1/103 (0%)
 Frame = -2

Query: 372 GIVPVPGGADDLWPARGFYLQLSDSLNSTYVSLSDPDADAILSSRSQLGQLVHVARLHPA 193
           GIVP   G+D LWP +GFY+Q+SDSLNSTYVSLS+ D D ILS+R QLGQ +++ RL  A
Sbjct: 35  GIVPALAGSD-LWPNQGFYVQISDSLNSTYVSLSERDTDLILSNRLQLGQFIYLERLEFA 93

Query: 192 HPVPRASGVRIIPPGRPLPFAGRPEPLLA-LSDPSRPDGFLIQ 67
            PVPRA+G+R  P      F G+PEPL+A +S+ S+ D F+IQ
Sbjct: 94  TPVPRAAGIR--PVAGRHAFVGKPEPLIARVSNGSKRD-FVIQ 133


>ref|XP_002324965.1| predicted protein [Populus trichocarpa] gi|222866399|gb|EEF03530.1|
           predicted protein [Populus trichocarpa]
          Length = 705

 Score = 98.6 bits (244), Expect = 5e-19
 Identities = 58/102 (56%), Positives = 71/102 (69%)
 Frame = -2

Query: 372 GIVPVPGGADDLWPARGFYLQLSDSLNSTYVSLSDPDADAILSSRSQLGQLVHVARLHPA 193
           GIVP   G+D LWP +GFY+QLSDSLNSTYVSLS+ D D IL++R QLGQ V++ R    
Sbjct: 35  GIVPALAGSD-LWPNQGFYVQLSDSLNSTYVSLSERDTDLILTNRLQLGQFVYIDRFDFD 93

Query: 192 HPVPRASGVRIIPPGRPLPFAGRPEPLLALSDPSRPDGFLIQ 67
            PVPR SG+R I  GR   F G PEPL+A    S+ + F+IQ
Sbjct: 94  SPVPRVSGIRPI-AGRH-SFVGTPEPLIARISASKKE-FVIQ 132


Top