BLASTX nr result
ID: Dioscorea21_contig00034246
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Dioscorea21_contig00034246 (276 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002299892.1| predicted protein [Populus trichocarpa] gi|2... 59 5e-07 ref|XP_004169610.1| PREDICTED: uncharacterized LOC101205220 [Cuc... 56 3e-06 ref|XP_004149057.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri... 56 3e-06 ref|NP_200787.1| uncharacterized protein [Arabidopsis thaliana] ... 55 8e-06 >ref|XP_002299892.1| predicted protein [Populus trichocarpa] gi|222847150|gb|EEE84697.1| predicted protein [Populus trichocarpa] Length = 445 Score = 58.5 bits (140), Expect = 5e-07 Identities = 40/84 (47%), Positives = 52/84 (61%), Gaps = 17/84 (20%) Frame = -1 Query: 207 ETLETLMKSDGRGIPIATED-----LDRTVGSSVSGRMRASAVLINLISCGSISVKD--- 52 ETLE+LMK+DGR I A+ + L +TVG+ GRM+AS VL+ LISCGSIS +D Sbjct: 248 ETLESLMKADGRVILGASGEGSGLNLSQTVGNC--GRMKASTVLMQLISCGSISFRDCGA 305 Query: 51 ---------LVTAQCKRRVPRVGS 7 L+T Q K R+PR G+ Sbjct: 306 TAVKEQGLSLITGQYKGRLPRGGN 329 >ref|XP_004169610.1| PREDICTED: uncharacterized LOC101205220 [Cucumis sativus] Length = 440 Score = 55.8 bits (133), Expect = 3e-06 Identities = 33/53 (62%), Positives = 38/53 (71%), Gaps = 1/53 (1%) Frame = -1 Query: 207 ETLETLMKSDGRGIPIATEDLDRTVGSSV-SGRMRASAVLINLISCGSISVKD 52 ETLE+LMK+DGR I +RT S SGRM+ASAVL+ LISCGSIS KD Sbjct: 252 ETLESLMKADGRLIISEGAKPNRTTAESFPSGRMKASAVLMQLISCGSISFKD 304 >ref|XP_004149057.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC101205220, partial [Cucumis sativus] Length = 438 Score = 55.8 bits (133), Expect = 3e-06 Identities = 33/53 (62%), Positives = 38/53 (71%), Gaps = 1/53 (1%) Frame = -1 Query: 207 ETLETLMKSDGRGIPIATEDLDRTVGSSV-SGRMRASAVLINLISCGSISVKD 52 ETLE+LMK+DGR I +RT S SGRM+ASAVL+ LISCGSIS KD Sbjct: 250 ETLESLMKADGRLIISEGAKPNRTTAESFPSGRMKASAVLMQLISCGSISFKD 302 >ref|NP_200787.1| uncharacterized protein [Arabidopsis thaliana] gi|9757899|dbj|BAB08346.1| unnamed protein product [Arabidopsis thaliana] gi|20260480|gb|AAM13138.1| unknown protein [Arabidopsis thaliana] gi|30725706|gb|AAP37875.1| At5g59790 [Arabidopsis thaliana] gi|110741012|dbj|BAE98600.1| hypothetical protein [Arabidopsis thaliana] gi|332009851|gb|AED97234.1| uncharacterized protein [Arabidopsis thaliana] Length = 423 Score = 54.7 bits (130), Expect = 8e-06 Identities = 32/54 (59%), Positives = 39/54 (72%), Gaps = 2/54 (3%) Frame = -1 Query: 207 ETLETLMKSDGRGI--PIATEDLDRTVGSSVSGRMRASAVLINLISCGSISVKD 52 ETLE L+K+DGR I P + RTV S SGRMRASAVL+ LISCG++S K+ Sbjct: 257 ETLENLIKADGRLILRPSESSTDHRTVESLSSGRMRASAVLMQLISCGTMSFKE 310