BLASTX nr result

ID: Dioscorea21_contig00034239 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00034239
         (329 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003608268.1| R2R3-MYB transcription factor [Medicago trun...    75   6e-12
gb|ABD32341.2| N-6 Adenine-specific DNA methylase; Homeodomain-r...    75   6e-12
ref|XP_003540884.1| PREDICTED: transcription factor MYB39-like [...    65   6e-09
gb|AAN05422.1| putative MYB transcription factor [Populus tremul...    65   6e-09
ref|XP_002316667.1| predicted protein [Populus trichocarpa] gi|2...    64   2e-08

>ref|XP_003608268.1| R2R3-MYB transcription factor [Medicago truncatula]
           gi|355509323|gb|AES90465.1| R2R3-MYB transcription
           factor [Medicago truncatula]
          Length = 358

 Score = 75.1 bits (183), Expect = 6e-12
 Identities = 35/66 (53%), Positives = 52/66 (78%)
 Frame = +2

Query: 2   THIRKRLLRMGIDPVTHRPRFDLLNFSSVLLNPAVYSTTTTSQFQAPKLLQNQALSDSDL 181
           THIRKRLLRMGIDPVTH PRFDLL+ SS+ LN ++Y++T++SQ    +L+  Q++ + ++
Sbjct: 111 THIRKRLLRMGIDPVTHNPRFDLLDLSSI-LNSSLYASTSSSQMNIQRLIGTQSIVNPEI 169

Query: 182 FKLTTN 199
            KL ++
Sbjct: 170 LKLASS 175


>gb|ABD32341.2| N-6 Adenine-specific DNA methylase; Homeodomain-related [Medicago
           truncatula]
          Length = 360

 Score = 75.1 bits (183), Expect = 6e-12
 Identities = 35/66 (53%), Positives = 52/66 (78%)
 Frame = +2

Query: 2   THIRKRLLRMGIDPVTHRPRFDLLNFSSVLLNPAVYSTTTTSQFQAPKLLQNQALSDSDL 181
           THIRKRLLRMGIDPVTH PRFDLL+ SS+ LN ++Y++T++SQ    +L+  Q++ + ++
Sbjct: 113 THIRKRLLRMGIDPVTHNPRFDLLDLSSI-LNSSLYASTSSSQMNIQRLIGTQSIVNPEI 171

Query: 182 FKLTTN 199
            KL ++
Sbjct: 172 LKLASS 177


>ref|XP_003540884.1| PREDICTED: transcription factor MYB39-like [Glycine max]
          Length = 312

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 43/101 (42%), Positives = 53/101 (52%)
 Frame = +2

Query: 2   THIRKRLLRMGIDPVTHRPRFDLLNFSSVLLNPAVYSTTTTSQFQAPKLLQNQALSDSDL 181
           THIRKRLLRMGIDPVTH PR DLL+ SS+L   +V+   +    Q   LL+ QAL +  L
Sbjct: 110 THIRKRLLRMGIDPVTHTPRLDLLDMSSIL--RSVFGKPSLLNMQG--LLRAQALMNQGL 165

Query: 182 FKLTTNYXXXXXXXXXXXXXXXXEEIQQLLQPNYIQNAVQF 304
            KL +                  +E   L   NY+QN  QF
Sbjct: 166 LKLAST--------ASLLSTINNDENPNLASHNYVQNQFQF 198


>gb|AAN05422.1| putative MYB transcription factor [Populus tremula x Populus alba]
          Length = 375

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 35/66 (53%), Positives = 44/66 (66%)
 Frame = +2

Query: 2   THIRKRLLRMGIDPVTHRPRFDLLNFSSVLLNPAVYSTTTTSQFQAPKLLQNQALSDSDL 181
           THIRKRLLRMGIDPVTH PR DLL+ SS+L +P   S    S+    ++L  Q L D +L
Sbjct: 110 THIRKRLLRMGIDPVTHSPRLDLLDLSSILNSPLYDS----SRMNMSRILGVQPLGDPEL 165

Query: 182 FKLTTN 199
            +L T+
Sbjct: 166 LRLATS 171


>ref|XP_002316667.1| predicted protein [Populus trichocarpa] gi|222859732|gb|EEE97279.1|
           predicted protein [Populus trichocarpa]
          Length = 374

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 34/66 (51%), Positives = 43/66 (65%)
 Frame = +2

Query: 2   THIRKRLLRMGIDPVTHRPRFDLLNFSSVLLNPAVYSTTTTSQFQAPKLLQNQALSDSDL 181
           THIRKRLLRMGIDPVTH PR DLL+ SS+L +P        S+    ++L  Q L D +L
Sbjct: 110 THIRKRLLRMGIDPVTHSPRLDLLDLSSILNSPLY-----DSRMNMSRVLGVQPLGDPEL 164

Query: 182 FKLTTN 199
            +L T+
Sbjct: 165 LRLATS 170


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