BLASTX nr result

ID: Dioscorea21_contig00034234 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00034234
         (357 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003550361.1| PREDICTED: F-box/FBD/LRR-repeat protein At1g...    72   5e-11
ref|XP_003589308.1| F-box/FBD/LRR-repeat protein [Medicago trunc...    69   4e-10
ref|XP_003589307.1| F-box/FBD/LRR-repeat protein [Medicago trunc...    69   4e-10
ref|XP_003589313.1| F-box/FBD/LRR-repeat protein [Medicago trunc...    67   2e-09
ref|XP_002510330.1| ubiquitin-protein ligase, putative [Ricinus ...    67   2e-09

>ref|XP_003550361.1| PREDICTED: F-box/FBD/LRR-repeat protein At1g13570-like [Glycine
           max]
          Length = 427

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 34/73 (46%), Positives = 46/73 (63%)
 Frame = -2

Query: 317 IHKWILMVSRKKIQEFRLELFQQPRYKVHSSLFSCHELRHLHLFDCTIILPRNFKDFDKL 138
           I +W L + RK I+EF LE+++  RYK+HS LFSC  L HL LF+C +  P  F+ F  L
Sbjct: 111 IDRWTLHLCRKSIKEFVLEIWKGQRYKIHSCLFSCQSLTHLELFNCWLKPPSTFQGFKNL 170

Query: 137 KTLQLFFATIFDD 99
           K+L L   T+  D
Sbjct: 171 KSLDLQHVTLAQD 183


>ref|XP_003589308.1| F-box/FBD/LRR-repeat protein [Medicago truncatula]
           gi|355478356|gb|AES59559.1| F-box/FBD/LRR-repeat protein
           [Medicago truncatula]
          Length = 428

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 32/73 (43%), Positives = 47/73 (64%)
 Frame = -2

Query: 317 IHKWILMVSRKKIQEFRLELFQQPRYKVHSSLFSCHELRHLHLFDCTIILPRNFKDFDKL 138
           I +W L ++R+ ++EF LE+++  RYK+ S LFSC  L HL LF+C +I P  F+ F  L
Sbjct: 111 IDRWTLHLTRRPVKEFVLEIWKGQRYKIPSCLFSCQGLHHLELFNCWLIPPSTFQGFRNL 170

Query: 137 KTLQLFFATIFDD 99
           K+L L   T+  D
Sbjct: 171 KSLDLQHVTLSQD 183


>ref|XP_003589307.1| F-box/FBD/LRR-repeat protein [Medicago truncatula]
           gi|355478355|gb|AES59558.1| F-box/FBD/LRR-repeat protein
           [Medicago truncatula]
          Length = 660

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 32/73 (43%), Positives = 47/73 (64%)
 Frame = -2

Query: 317 IHKWILMVSRKKIQEFRLELFQQPRYKVHSSLFSCHELRHLHLFDCTIILPRNFKDFDKL 138
           I +W L ++R+ ++EF LE+++  RYK+ S LFSC  L HL LF+C +I P  F+ F  L
Sbjct: 343 IDRWTLHLTRRPVKEFVLEIWKGQRYKIPSCLFSCQGLHHLELFNCWLIPPSTFQGFRNL 402

Query: 137 KTLQLFFATIFDD 99
           K+L L   T+  D
Sbjct: 403 KSLDLQHVTLSQD 415


>ref|XP_003589313.1| F-box/FBD/LRR-repeat protein [Medicago truncatula]
           gi|355478361|gb|AES59564.1| F-box/FBD/LRR-repeat protein
           [Medicago truncatula]
          Length = 293

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 32/75 (42%), Positives = 48/75 (64%), Gaps = 2/75 (2%)
 Frame = -2

Query: 317 IHKWILMVSRKKIQEFRLELFQQP--RYKVHSSLFSCHELRHLHLFDCTIILPRNFKDFD 144
           I +W L ++R +++EF LE+++ P  RYK+ S LFSC  L HL L +C +I P  F+ F 
Sbjct: 121 IDRWTLYLTRWQVKEFVLEIWKNPDQRYKIPSWLFSCQSLHHLELLECWLIPPSTFQGFK 180

Query: 143 KLKTLQLFFATIFDD 99
            LK+L L + T+  D
Sbjct: 181 NLKSLDLQYVTLTKD 195


>ref|XP_002510330.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223551031|gb|EEF52517.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 426

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 35/70 (50%), Positives = 45/70 (64%)
 Frame = -2

Query: 317 IHKWILMVSRKKIQEFRLELFQQPRYKVHSSLFSCHELRHLHLFDCTIILPRNFKDFDKL 138
           I +WIL +SR  I+EF LE+++  RYKV SSLFS   L HL LF+C +  P  FK F  L
Sbjct: 110 IDRWILHLSRSSIKEFILEIWKGQRYKVPSSLFSFEHLIHLELFNCLLQPPLTFKGFRSL 169

Query: 137 KTLQLFFATI 108
           K+L L   T+
Sbjct: 170 KSLDLQHITL 179


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