BLASTX nr result

ID: Dioscorea21_contig00034222 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00034222
         (277 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002532941.1| conserved hypothetical protein [Ricinus comm...    77   1e-12
ref|XP_002274782.1| PREDICTED: uncharacterized protein LOC100251...    76   2e-12
emb|CAN62350.1| hypothetical protein VITISV_004944 [Vitis vinifera]    76   2e-12
ref|XP_002299072.1| predicted protein [Populus trichocarpa] gi|2...    75   5e-12
ref|XP_002864435.1| hypothetical protein ARALYDRAFT_495698 [Arab...    73   2e-11

>ref|XP_002532941.1| conserved hypothetical protein [Ricinus communis]
           gi|223527292|gb|EEF29445.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 220

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 39/72 (54%), Positives = 50/72 (69%)
 Frame = +1

Query: 55  KDTHIVVVDVPAASEEDQLALIPSPGTAMHHHPLTEISGSPGHLLLLKLWQREEDLISRR 234
           KD HIV + V    +E QL ++ +   A+ +HPLTEIS SPGHLLLLKLWQREEDL +R+
Sbjct: 5   KDAHIVEIPVNEEHQEKQLCVMTA---ALQNHPLTEISSSPGHLLLLKLWQREEDLFNRK 61

Query: 235 TTAIESRLDDSK 270
               E+R+D  K
Sbjct: 62  IGVKETRMDSIK 73


>ref|XP_002274782.1| PREDICTED: uncharacterized protein LOC100251512 [Vitis vinifera]
          Length = 221

 Score = 76.3 bits (186), Expect = 2e-12
 Identities = 39/77 (50%), Positives = 50/77 (64%)
 Frame = +1

Query: 40  MSNTSKDTHIVVVDVPAASEEDQLALIPSPGTAMHHHPLTEISGSPGHLLLLKLWQREED 219
           M++  KD H+V + V     + ++    +  TA+HHHPL EIS SPGHLLLLKLWQREED
Sbjct: 1   MASDLKDAHVVEIAVDG-EHQHKIITAMNAITAIHHHPLMEISQSPGHLLLLKLWQREED 59

Query: 220 LISRRTTAIESRLDDSK 270
           L  RR    E+R+D  K
Sbjct: 60  LSGRRIALRETRMDSIK 76


>emb|CAN62350.1| hypothetical protein VITISV_004944 [Vitis vinifera]
          Length = 218

 Score = 76.3 bits (186), Expect = 2e-12
 Identities = 39/77 (50%), Positives = 50/77 (64%)
 Frame = +1

Query: 40  MSNTSKDTHIVVVDVPAASEEDQLALIPSPGTAMHHHPLTEISGSPGHLLLLKLWQREED 219
           M++  KD H+V + V     + ++    +  TA+HHHPL EIS SPGHLLLLKLWQREED
Sbjct: 1   MASDLKDAHVVEIAVDG-EHQHKIITAMNAITAIHHHPLMEISQSPGHLLLLKLWQREED 59

Query: 220 LISRRTTAIESRLDDSK 270
           L  RR    E+R+D  K
Sbjct: 60  LSGRRIALRETRMDSIK 76


>ref|XP_002299072.1| predicted protein [Populus trichocarpa] gi|222846330|gb|EEE83877.1|
           predicted protein [Populus trichocarpa]
          Length = 219

 Score = 75.1 bits (183), Expect = 5e-12
 Identities = 43/74 (58%), Positives = 48/74 (64%), Gaps = 2/74 (2%)
 Frame = +1

Query: 55  KDTHIVVVDVPAASEEDQLALIPSPGT--AMHHHPLTEISGSPGHLLLLKLWQREEDLIS 228
           KD HIV + V    EE Q  LI +  T  A+ +HPL EIS SPGHLLLLKLWQREEDL  
Sbjct: 5   KDAHIVEIPV---DEEHQQKLICAMNTIKAIQNHPLAEISNSPGHLLLLKLWQREEDLFG 61

Query: 229 RRTTAIESRLDDSK 270
           RR    ESR+D  K
Sbjct: 62  RRIALKESRMDSIK 75


>ref|XP_002864435.1| hypothetical protein ARALYDRAFT_495698 [Arabidopsis lyrata subsp.
           lyrata] gi|297310270|gb|EFH40694.1| hypothetical protein
           ARALYDRAFT_495698 [Arabidopsis lyrata subsp. lyrata]
          Length = 235

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 40/80 (50%), Positives = 50/80 (62%), Gaps = 7/80 (8%)
 Frame = +1

Query: 52  SKDTHIVVVDVPAASEE---DQLALIPSPGTAM----HHHPLTEISGSPGHLLLLKLWQR 210
           +KD+H+V + V    +E    QL  + +PG  +      HPL+EIS SPGHLLLLKLWQR
Sbjct: 4   TKDSHVVEIPVDEEHKERQQQQLVAVSNPGMGILKVIQQHPLSEISESPGHLLLLKLWQR 63

Query: 211 EEDLISRRTTAIESRLDDSK 270
           EEDL  RR    ESRL+  K
Sbjct: 64  EEDLFCRRVLLKESRLESIK 83


Top