BLASTX nr result

ID: Dioscorea21_contig00034219 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00034219
         (880 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAE79384.1| unnamed protein product [Ipomoea batatas]             135   9e-30
dbj|BAE79385.1| unnamed protein product [Ipomoea batatas]             134   4e-29
dbj|BAE79382.1| unnamed protein product [Ipomoea batatas]             134   4e-29
ref|XP_002440822.1| hypothetical protein SORBIDRAFT_09g007400 [S...   115   1e-23
gb|ABA91475.1| retrotransposon protein, putative, unclassified [...   115   1e-23

>dbj|BAE79384.1| unnamed protein product [Ipomoea batatas]
          Length = 1898

 Score =  135 bits (341), Expect = 9e-30
 Identities = 79/269 (29%), Positives = 137/269 (50%), Gaps = 1/269 (0%)
 Frame = +3

Query: 3    LILVTSASRKVACNVKLCLSIYGDLTGQKVNSSKSELVFPSRMNKRLSNSISRILGYKNG 182
            L+L   AS   A  +  CL  + D +G KVN SKS L   S +N  L  +I  IL     
Sbjct: 1221 LMLFGEASEHQAQIMFDCLDSFSDASGLKVNFSKSLLFCSSNVNAGLKRAIGSILQVPVA 1280

Query: 183  SFPFTYLGILISPKRLALSYFTSMVNRIEKTINFWKKSKISAAGKTILINSNIMSIPTYY 362
                TYLGI +  +R++ + F ++++++   ++ WK S ++ AG+ +L+ +++ ++PTY 
Sbjct: 1281 ESLGTYLGIPMLKERVSRNTFNAVIDKMRTKLSSWKASSLNMAGRRVLVQASLATVPTYT 1340

Query: 363  LSAYPVPDTILYRIEKAARELFWSKDCNRKGICSVGWSEMILDHSEGGLSIRDLGVAKIS 542
            +    +P +    I+K  R   W  D N + + SV W+E+    +EGGL +R       +
Sbjct: 1341 MQVMALPVSTCNEIDKTCRNFLWGHDTNTRKLHSVNWAEICKPRNEGGLGLRMARDFNRA 1400

Query: 543  LMSKNVLFLLNNRDAWWVTIMKEKY-GSFNIWNEHAPPNCSWFYRGLYRTARVIRPHLWI 719
             ++K    + +N D  WV +++EKY  + +  +  +  NCSW +R + +   V+   +  
Sbjct: 1401 FLTKMAWQIFSNIDKLWVKVLREKYVKNADFLHLQSQSNCSWGWRSIMKGKDVLAGAIKW 1460

Query: 720  QCINPEKTSFLNDPWYFDLPLACKPTYLN 806
               N  K +F ND W  D PLA     +N
Sbjct: 1461 NVGNGRKINFWNDWWVGDGPLASNTDCIN 1489


>dbj|BAE79385.1| unnamed protein product [Ipomoea batatas]
          Length = 1366

 Score =  134 bits (336), Expect = 4e-29
 Identities = 78/269 (28%), Positives = 137/269 (50%), Gaps = 1/269 (0%)
 Frame = +3

Query: 3    LILVTSASRKVACNVKLCLSIYGDLTGQKVNSSKSELVFPSRMNKRLSNSISRILGYKNG 182
            L+L   AS   A  +  CL  + + +G KVN SKS L   S +N  L  +I  IL     
Sbjct: 689  LMLFGEASEHQAQIMFDCLDSFSNASGLKVNFSKSLLFCSSNVNAGLKRAIGSILQVPVA 748

Query: 183  SFPFTYLGILISPKRLALSYFTSMVNRIEKTINFWKKSKISAAGKTILINSNIMSIPTYY 362
                TYLGI +  +R++ + F ++++++   ++ WK S ++ AG+ +L+ +++ ++PTY 
Sbjct: 749  ESLGTYLGIPMLKERVSRNTFNAVIDKMRTKLSSWKASSLNMAGRRVLVQASLATVPTYT 808

Query: 363  LSAYPVPDTILYRIEKAARELFWSKDCNRKGICSVGWSEMILDHSEGGLSIRDLGVAKIS 542
            +    +P +    I+K  R   W  D N + + SV W+E+    +EGGL +R       +
Sbjct: 809  MQVMALPVSTCNEIDKTCRNFLWGHDTNTRKLHSVNWAEICKPRNEGGLGLRMARDFNRA 868

Query: 543  LMSKNVLFLLNNRDAWWVTIMKEKY-GSFNIWNEHAPPNCSWFYRGLYRTARVIRPHLWI 719
             ++K    + +N D  WV +++EKY  + +  +  +  NCSW +R + +   V+   +  
Sbjct: 869  FLTKMAWQIFSNIDKLWVKVLREKYVKNADFLHLQSQSNCSWGWRSIMKGKDVLAGAIKW 928

Query: 720  QCINPEKTSFLNDPWYFDLPLACKPTYLN 806
               N  K +F ND W  D PLA     +N
Sbjct: 929  NVGNGRKINFWNDWWVGDGPLASNTDCIN 957


>dbj|BAE79382.1| unnamed protein product [Ipomoea batatas]
          Length = 1366

 Score =  134 bits (336), Expect = 4e-29
 Identities = 78/269 (28%), Positives = 137/269 (50%), Gaps = 1/269 (0%)
 Frame = +3

Query: 3    LILVTSASRKVACNVKLCLSIYGDLTGQKVNSSKSELVFPSRMNKRLSNSISRILGYKNG 182
            L+L   AS   A  +  CL  + + +G KVN SKS L   S +N  L  +I  IL     
Sbjct: 689  LMLFGEASEHQAQIMFDCLDSFSNASGLKVNFSKSLLFCSSNVNAGLKRAIGSILQVPVA 748

Query: 183  SFPFTYLGILISPKRLALSYFTSMVNRIEKTINFWKKSKISAAGKTILINSNIMSIPTYY 362
                TYLGI +  +R++ + F ++++++   ++ WK S ++ AG+ +L+ +++ ++PTY 
Sbjct: 749  ESLGTYLGIPMLKERVSRNTFNAVIDKMRTKLSSWKASSLNMAGRRVLVQASLATVPTYT 808

Query: 363  LSAYPVPDTILYRIEKAARELFWSKDCNRKGICSVGWSEMILDHSEGGLSIRDLGVAKIS 542
            +    +P +    I+K  R   W  D N + + SV W+E+    +EGGL +R       +
Sbjct: 809  MQVMALPVSTCNEIDKTCRNFLWGHDTNTRKLHSVNWAEICKPRNEGGLGLRMARDFNRA 868

Query: 543  LMSKNVLFLLNNRDAWWVTIMKEKY-GSFNIWNEHAPPNCSWFYRGLYRTARVIRPHLWI 719
             ++K    + +N D  WV +++EKY  + +  +  +  NCSW +R + +   V+   +  
Sbjct: 869  FLTKMAWQIFSNIDKLWVKVLREKYVKNADFLHLQSQSNCSWGWRSIMKGKDVLAGAIKW 928

Query: 720  QCINPEKTSFLNDPWYFDLPLACKPTYLN 806
               N  K +F ND W  D PLA     +N
Sbjct: 929  NVGNGRKINFWNDWWVGDGPLASNTDCIN 957


>ref|XP_002440822.1| hypothetical protein SORBIDRAFT_09g007400 [Sorghum bicolor]
            gi|241946107|gb|EES19252.1| hypothetical protein
            SORBIDRAFT_09g007400 [Sorghum bicolor]
          Length = 835

 Score =  115 bits (289), Expect = 1e-23
 Identities = 71/250 (28%), Positives = 132/250 (52%), Gaps = 1/250 (0%)
 Frame = +3

Query: 36   ACNVKLCLSIYGDLTGQKVNSSKSELVFPSRMNKRLSNSISRILGYKNGSFPFTYLGILI 215
            A N+KL L IY  + G K+N SKSE++  +  +      +  I   + G+FP  YLG+ +
Sbjct: 318  ARNMKLLLYIYELMAGLKINFSKSEVITINDEDNWDRKYVD-IFNCQVGTFPIKYLGVPV 376

Query: 216  SPKRLALSYFTSMVNRIEKTINFWKKSKISAAGKTILINSNIMSIPTYYLSAYPVPDTIL 395
            SP RL +S ++ ++++  K ++ WK   +S AG++ LI+S++ + P Y++S Y +P +++
Sbjct: 377  SPSRLHVSDWSPLIDKSMKKLDIWKGGNMSIAGRSTLISSSLNNAPIYHMSIYLLPKSVI 436

Query: 396  YRIEKAARELFWSKDCNRKGICSVGWSEMILDHSEGGLSIRDLGVAKISLMSKNVLFLLN 575
             R++K  R  FW     ++    + W+++     +GG+ I+D+    +SL+ K   + L+
Sbjct: 437  GRLDKIRRNFFWQGGSTKQKYHLIKWTKICRSKKKGGIGIKDIRKMNVSLLIK-WWWKLD 495

Query: 576  NRDAWWVTIMKEKY-GSFNIWNEHAPPNCSWFYRGLYRTARVIRPHLWIQCINPEKTSFL 752
            N D  W  I+K KY  S +I +     + S  +  L +   +          + + T F 
Sbjct: 496  NEDDVWQKIIKHKYLKSNSILDVSHKQSDSAIWADLLKVKDIYLQGRKKVVRDGKTTFFW 555

Query: 753  NDPWYFDLPL 782
             D W ++ PL
Sbjct: 556  KDTWLYEKPL 565


>gb|ABA91475.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 994

 Score =  115 bits (288), Expect = 1e-23
 Identities = 79/256 (30%), Positives = 124/256 (48%), Gaps = 7/256 (2%)
 Frame = +3

Query: 36   ACNVKLCLSIYGDLTGQKVNSSKSELVFPSRMNKRLSNSISRILGYKNGSFPFTYLGILI 215
            A N+KL L+ +  L+G K+N  KSE+    R  K      S++ G K GSFPF YLG+ +
Sbjct: 645  AINMKLILTTFEQLSGLKINFHKSEIFCFGRA-KENEAFYSQLFGCKIGSFPFRYLGLPM 703

Query: 216  SPKRLALSYFTSMVNRIEKTINFWKKSKISAAGKTILINSNIMSIPTYYLSAYPVPDTIL 395
              ++L    +  + NRIEK +  WK   ++A G+ +LINS + S+P + LS + +P  +L
Sbjct: 704  HTRKLNNKDWQEIKNRIEKKLGGWKGKLLTAGGRLVLINSVLSSLPMFMLSFFEIPKGVL 763

Query: 396  YRIEKAARELFWSKDCNRKGICSVGWSEMILDHSEGGLSIRDLGVAKISLMSKNVLFLLN 575
             +I+      +W  D ++K      W+ M     +GGL I +L +    L+SK  LF L 
Sbjct: 764  EKIDCYRSRFYWQNDQHKKKYRLAKWTVMCQPKIQGGLGIPNLEIQNKCLLSK-WLFKLL 822

Query: 576  NRDAWWVTIMKEKYGSFNIWNEHAPPNC-------SWFYRGLYRTARVIRPHLWIQCINP 734
            N D  W  +++ KY       +  P  C       S F++GL             +  + 
Sbjct: 823  NEDGLWQELIRNKY------LKEKPLGCCQKRATDSHFWKGLMSIKDTFLGLGSFKIKDG 876

Query: 735  EKTSFLNDPWYFDLPL 782
             +T F  D W  + PL
Sbjct: 877  SQTRFWCDTWLGNKPL 892


Top