BLASTX nr result

ID: Dioscorea21_contig00034206 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00034206
         (366 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003635184.1| PREDICTED: transcription factor bHLH123-like...   101   7e-20
ref|XP_002319791.1| predicted protein [Populus trichocarpa] gi|2...    92   6e-17
ref|XP_002280367.2| PREDICTED: transcription factor bHLH123-like...    91   1e-16
emb|CBI20463.3| unnamed protein product [Vitis vinifera]               91   1e-16
gb|ABK95256.1| unknown [Populus trichocarpa]                           90   2e-16

>ref|XP_003635184.1| PREDICTED: transcription factor bHLH123-like [Vitis vinifera]
           gi|297735889|emb|CBI18658.3| unnamed protein product
           [Vitis vinifera]
          Length = 464

 Score =  101 bits (251), Expect = 7e-20
 Identities = 53/103 (51%), Positives = 70/103 (67%), Gaps = 3/103 (2%)
 Frame = +2

Query: 65  FLKSSSPKHHALSNQLHFSNNTPYWNASGGTAGVDVRPSFYASLPSHFVQQAFEQKPNCN 244
           ++K S PK    S+ LHF+NNTP+WNAS      D+R SF+ S  S F+   FE+KPNC+
Sbjct: 255 YMKPSLPKQQPNSH-LHFTNNTPFWNASAAALN-DIRASFFPSPQSQFLTPTFEEKPNCS 312

Query: 245 NNLSIKNSEAVT---SGTRKSNSEPAFKKPRMETPSPLPTFKV 364
              +  N+E V    S  +KS++EPAFK+PR+ETPSPLPTFKV
Sbjct: 313 KLTTKLNTEEVRDSGSVLKKSSAEPAFKRPRIETPSPLPTFKV 355


>ref|XP_002319791.1| predicted protein [Populus trichocarpa] gi|222858167|gb|EEE95714.1|
           predicted protein [Populus trichocarpa]
          Length = 444

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 51/102 (50%), Positives = 64/102 (62%)
 Frame = +2

Query: 59  PQFLKSSSPKHHALSNQLHFSNNTPYWNASGGTAGVDVRPSFYASLPSHFVQQAFEQKPN 238
           PQFL++S PK  + SNQLHFSNNTP+WNAS  +A  DVRPS++ S+   F    F++KP 
Sbjct: 246 PQFLRNSPPKQTS-SNQLHFSNNTPFWNAS-ASAMNDVRPSYFPSMQPQFATSNFDEKPK 303

Query: 239 CNNNLSIKNSEAVTSGTRKSNSEPAFKKPRMETPSPLPTFKV 364
            N    I          +KS SE A K+PR E PS LP+FKV
Sbjct: 304 QN----ISEVRDSNIAVKKSGSEAATKRPRNEIPSSLPSFKV 341


>ref|XP_002280367.2| PREDICTED: transcription factor bHLH123-like [Vitis vinifera]
          Length = 361

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 48/103 (46%), Positives = 63/103 (61%)
 Frame = +2

Query: 56  LPQFLKSSSPKHHALSNQLHFSNNTPYWNASGGTAGVDVRPSFYASLPSHFVQQAFEQKP 235
           +PQFL++S PK  +   QLHFSNN P+WNAS      D RPSF  +L   F    F +KP
Sbjct: 156 VPQFLRTSPPKQPS-HTQLHFSNNAPFWNASAAAMAADSRPSFSPTLQPQFSTPTFNEKP 214

Query: 236 NCNNNLSIKNSEAVTSGTRKSNSEPAFKKPRMETPSPLPTFKV 364
              N+  I++   ++S  +KS+ E   K+PR ETPSPLP FKV
Sbjct: 215 --KNSSEIRD---ISSVAKKSSGETGTKRPRSETPSPLPAFKV 252


>emb|CBI20463.3| unnamed protein product [Vitis vinifera]
          Length = 384

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 48/103 (46%), Positives = 63/103 (61%)
 Frame = +2

Query: 56  LPQFLKSSSPKHHALSNQLHFSNNTPYWNASGGTAGVDVRPSFYASLPSHFVQQAFEQKP 235
           +PQFL++S PK  +   QLHFSNN P+WNAS      D RPSF  +L   F    F +KP
Sbjct: 179 VPQFLRTSPPKQPS-HTQLHFSNNAPFWNASAAAMAADSRPSFSPTLQPQFSTPTFNEKP 237

Query: 236 NCNNNLSIKNSEAVTSGTRKSNSEPAFKKPRMETPSPLPTFKV 364
              N+  I++   ++S  +KS+ E   K+PR ETPSPLP FKV
Sbjct: 238 --KNSSEIRD---ISSVAKKSSGETGTKRPRSETPSPLPAFKV 275


>gb|ABK95256.1| unknown [Populus trichocarpa]
          Length = 467

 Score = 89.7 bits (221), Expect = 2e-16
 Identities = 52/107 (48%), Positives = 62/107 (57%), Gaps = 2/107 (1%)
 Frame = +2

Query: 50  TDLPQFLKSSSPKHHALSNQLHFSNNTPYWNASGGTAGVDVRPSFYASLPSHFVQQAFEQ 229
           T +   +KS   K  A S  LHF+NNT YWNAS  T   D+R SF  S PS F+   F++
Sbjct: 254 TKVSPLIKSCLQKQQASS--LHFTNNTTYWNASP-TGINDIRASFLPSSPSQFLLPTFQE 310

Query: 230 KPNCNNNLSIKNSEAVTSGTR--KSNSEPAFKKPRMETPSPLPTFKV 364
           KPNC +     N E V       K   EPAFK+PR+E PSPLPTFKV
Sbjct: 311 KPNCPSLTIQPNREEVRDSVSVVKKGCEPAFKRPRIEAPSPLPTFKV 357


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