BLASTX nr result

ID: Dioscorea21_contig00034202 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00034202
         (557 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002526570.1| brca1 associated ring domain, putative [Rici...    97   1e-18
ref|XP_004163582.1| PREDICTED: protein BREAST CANCER SUSCEPTIBIL...    94   1e-17
ref|XP_004151994.1| PREDICTED: protein BREAST CANCER SUSCEPTIBIL...    94   1e-17
ref|NP_001053298.1| Os04g0512400 [Oryza sativa Japonica Group] g...    91   2e-16
emb|CAH68012.1| OSIGBa0157K09-H0214G12.23 [Oryza sativa Indica G...    88   1e-15

>ref|XP_002526570.1| brca1 associated ring domain, putative [Ricinus communis]
           gi|223534131|gb|EEF35848.1| brca1 associated ring
           domain, putative [Ricinus communis]
          Length = 744

 Score = 97.4 bits (241), Expect = 1e-18
 Identities = 70/193 (36%), Positives = 108/193 (55%), Gaps = 20/193 (10%)
 Frame = -2

Query: 520 SPPSFGDLKDSDHESNDQGSDRKS--QAVPEKRLIRKDLNDVGANE--------SEQDEF 371
           SPPSFGD+K  +++S DQG D  +  QA+   RL+++  +D+ + E        +E    
Sbjct: 229 SPPSFGDVKSPENDSCDQGDDSPTNYQAI---RLVKRSPDDMTSQERHDGFASGTEGGNL 285

Query: 370 RESKK-QKLDK-ELGRGDDRAG-INVKAMPALIAGSEHEHESLPR---SQP---LSDSTF 218
           R+ K+ +KLD  +L R  +R+  I+ +        S+  H+ +P     QP   L DS+ 
Sbjct: 286 RDPKRHKKLDYGQLNRDTNRSSPISSQTENPGACCSQLGHKFVPPHIDGQPPALLEDSSV 345

Query: 217 VSTEASVECVFCHSFRVTEASGEMLHYLNGTPVNENHPS-PDVLHVHQQCIEWAPQIYFA 41
               A + C FC S R ++ +G M HY+NG  V  +  S P+ LHVH+ CIEWAPQ+YF 
Sbjct: 346 ----AKIMCGFCQSSRTSKDTGPMFHYVNGKLVEGDEASGPNALHVHRICIEWAPQVYFV 401

Query: 40  GDIAMNVEAELSR 2
            +   N++AEL+R
Sbjct: 402 DETVKNLKAELAR 414


>ref|XP_004163582.1| PREDICTED: protein BREAST CANCER SUSCEPTIBILITY 1 homolog [Cucumis
           sativus]
          Length = 679

 Score = 94.4 bits (233), Expect = 1e-17
 Identities = 69/194 (35%), Positives = 106/194 (54%), Gaps = 21/194 (10%)
 Frame = -2

Query: 520 SPPSFGDLKDSDHESND---QGSDRKSQ------AVPEKRLIRKDLNDVGANESEQD-EF 371
           SPPSFGD K SD  S++    GS   S       +  +K+L    L+   ++ SE++   
Sbjct: 175 SPPSFGDGKVSDDSSDEYRGHGSKNTSDWISVITSADDKKL---QLSKCTSSASEEEGHL 231

Query: 370 RESKKQKLDKELGRGDDRAGINVKAMPALI---------AGSEHEHE-SLPRSQPLSDST 221
           R+ K+QKL+   G+   R     +  P +          +G EH+ + +   S PL+D+ 
Sbjct: 232 RDLKRQKLN--YGQLKFRISSADQTHPPVSEPGNSETSNSGMEHKSQVTNASSMPLADAD 289

Query: 220 FVSTEASVECVFCHSFRVTEASGEMLHYLNGTPVNE-NHPSPDVLHVHQQCIEWAPQIYF 44
                 +V+C FC S +VTE +G +LHY+NG  V+     SP+V+HVH+ C+EWAPQ YF
Sbjct: 290 DTIVR-NVKCAFCQSSKVTEDTGAVLHYMNGRLVDGVEAASPNVIHVHKLCVEWAPQAYF 348

Query: 43  AGDIAMNVEAELSR 2
            GD   N++AE++R
Sbjct: 349 QGDDVHNLKAEVAR 362


>ref|XP_004151994.1| PREDICTED: protein BREAST CANCER SUSCEPTIBILITY 1 homolog [Cucumis
           sativus]
          Length = 679

 Score = 94.4 bits (233), Expect = 1e-17
 Identities = 69/194 (35%), Positives = 106/194 (54%), Gaps = 21/194 (10%)
 Frame = -2

Query: 520 SPPSFGDLKDSDHESND---QGSDRKSQ------AVPEKRLIRKDLNDVGANESEQD-EF 371
           SPPSFGD K SD  S++    GS   S       +  +K+L    L+   ++ SE++   
Sbjct: 175 SPPSFGDGKVSDDSSDEYRGHGSKNTSDWISVITSADDKKL---QLSKCTSSASEEEGHL 231

Query: 370 RESKKQKLDKELGRGDDRAGINVKAMPALI---------AGSEHEHE-SLPRSQPLSDST 221
           R+ K+QKL+   G+   R     +  P +          +G EH+ + +   S PL+D+ 
Sbjct: 232 RDLKRQKLN--YGQLKFRISSADQTHPPVSEPGNSETSNSGMEHKSQVTNASSMPLADAD 289

Query: 220 FVSTEASVECVFCHSFRVTEASGEMLHYLNGTPVNE-NHPSPDVLHVHQQCIEWAPQIYF 44
                 +V+C FC S +VTE +G +LHY+NG  V+     SP+V+HVH+ C+EWAPQ YF
Sbjct: 290 DTIVR-NVKCAFCQSSKVTEDTGAVLHYMNGRLVDGVEAASPNVIHVHKLCVEWAPQAYF 348

Query: 43  AGDIAMNVEAELSR 2
            GD   N++AE++R
Sbjct: 349 QGDDVHNLKAEVAR 362


>ref|NP_001053298.1| Os04g0512400 [Oryza sativa Japonica Group]
           gi|38345319|emb|CAE03392.2| OSJNBa0004N05.16 [Oryza
           sativa Japonica Group] gi|113564869|dbj|BAF15212.1|
           Os04g0512400 [Oryza sativa Japonica Group]
           gi|215737022|dbj|BAG95951.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|218195201|gb|EEC77628.1| hypothetical protein
           OsI_16617 [Oryza sativa Indica Group]
           gi|222629197|gb|EEE61329.1| hypothetical protein
           OsJ_15441 [Oryza sativa Japonica Group]
          Length = 629

 Score = 90.5 bits (223), Expect = 2e-16
 Identities = 63/180 (35%), Positives = 92/180 (51%), Gaps = 2/180 (1%)
 Frame = -2

Query: 535 KEGPYSPPSFGDLKDSDHESND-QGSDRKSQAVPEKRLIRKDLNDVGANESEQDEFRESK 359
           ++GP    S    +D D +SND +G    S++ P+  L R+         +  D+ RE K
Sbjct: 178 QKGPCRSQSSDGPRDLDCDSNDLEGELITSRSSPQSVLKREP-------NTANDDNRELK 230

Query: 358 KQKLDKELGRGDDRAGINVKAMPALIAGSEHEHESLPRSQPLSDSTFVSTEASVECVFCH 179
           +QK   +    DDR        PA +AG+                         +C FCH
Sbjct: 231 RQKSTDQ----DDR-------QPA-VAGAW------------------------KCEFCH 254

Query: 178 SFRVTEASGEMLHYLNGTPVNENHP-SPDVLHVHQQCIEWAPQIYFAGDIAMNVEAELSR 2
           S + TE++G + HYL+G P+ +N    P+VLHVH++CIEWAPQ +F GDIA N+E EL+R
Sbjct: 255 SSKTTESTGPLSHYLHGEPLEDNQAWKPNVLHVHEKCIEWAPQAFFTGDIANNLEPELAR 314


>emb|CAH68012.1| OSIGBa0157K09-H0214G12.23 [Oryza sativa Indica Group]
          Length = 629

 Score = 87.8 bits (216), Expect = 1e-15
 Identities = 37/66 (56%), Positives = 51/66 (77%), Gaps = 1/66 (1%)
 Frame = -2

Query: 196 ECVFCHSFRVTEASGEMLHYLNGTPVNENHP-SPDVLHVHQQCIEWAPQIYFAGDIAMNV 20
           +C FCHS + TE++G + HYL+G P+ +N    P+VLHVH++CIEWAPQ +F GDIA N+
Sbjct: 249 KCEFCHSSKTTESTGPLSHYLHGEPLEDNQAWKPNVLHVHEKCIEWAPQAFFTGDIANNL 308

Query: 19  EAELSR 2
           E EL+R
Sbjct: 309 EPELAR 314


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