BLASTX nr result

ID: Dioscorea21_contig00034197 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00034197
         (260 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFW75542.1| hypothetical protein ZEAMMB73_420601 [Zea mays]         75   4e-12
tpg|DAA56964.1| TPA: hypothetical protein ZEAMMB73_934848, parti...    72   5e-11
gb|AFW82264.1| hypothetical protein ZEAMMB73_128218 [Zea mays]         72   5e-11
gb|AFW67172.1| PHD finger protein [Zea mays]                           72   5e-11
gb|EEE60183.1| hypothetical protein OsJ_13124 [Oryza sativa Japo...    72   5e-11

>gb|AFW75542.1| hypothetical protein ZEAMMB73_420601 [Zea mays]
          Length = 110

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 38/69 (55%), Positives = 46/69 (66%)
 Frame = -1

Query: 209 YSLFLDFSIFDMLNAVSNLDFANAYWQFDDRKTLMGAARKLKTHRRNQRWGDRAYK*SHL 30
           Y+ F+  ++F  L  V  + F +    F  +   MGA RKLKTHRRNQRW D+AYK SHL
Sbjct: 14  YNSFMVLALFSTL--VDLMCFKDESSCFSSKTRGMGAGRKLKTHRRNQRWADKAYKKSHL 71

Query: 29  GNEWKKPFA 3
           GNEWKKPFA
Sbjct: 72  GNEWKKPFA 80


>tpg|DAA56964.1| TPA: hypothetical protein ZEAMMB73_934848, partial [Zea mays]
          Length = 109

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 31/35 (88%), Positives = 32/35 (91%)
 Frame = -1

Query: 107 MGAARKLKTHRRNQRWGDRAYK*SHLGNEWKKPFA 3
           MGA RKLKTHRRNQRW D+AYK SHLGNEWKKPFA
Sbjct: 62  MGAGRKLKTHRRNQRWADKAYKKSHLGNEWKKPFA 96


>gb|AFW82264.1| hypothetical protein ZEAMMB73_128218 [Zea mays]
          Length = 97

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 31/35 (88%), Positives = 32/35 (91%)
 Frame = -1

Query: 107 MGAARKLKTHRRNQRWGDRAYK*SHLGNEWKKPFA 3
           MGA RKLKTHRRNQRW D+AYK SHLGNEWKKPFA
Sbjct: 7   MGAGRKLKTHRRNQRWADKAYKKSHLGNEWKKPFA 41


>gb|AFW67172.1| PHD finger protein [Zea mays]
          Length = 1166

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 31/35 (88%), Positives = 32/35 (91%)
 Frame = -1

Query: 107 MGAARKLKTHRRNQRWGDRAYK*SHLGNEWKKPFA 3
           MGA RKLKTHRRNQRW D+AYK SHLGNEWKKPFA
Sbjct: 7   MGAGRKLKTHRRNQRWADKAYKKSHLGNEWKKPFA 41


>gb|EEE60183.1| hypothetical protein OsJ_13124 [Oryza sativa Japonica Group]
           gi|335999260|gb|AEH76889.1| 40S ribosomal protein S23
           [Aegilops tauschii] gi|335999265|gb|AEH76892.1| 40S
           ribosomal protein S23 [Triticum aestivum]
           gi|335999272|gb|AEH76896.1| 40S ribosomal protein S23
           [Triticum aestivum] gi|335999277|gb|AEH76899.1| 40S
           ribosomal protein S23 [Triticum durum]
          Length = 136

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 31/35 (88%), Positives = 32/35 (91%)
 Frame = -1

Query: 107 MGAARKLKTHRRNQRWGDRAYK*SHLGNEWKKPFA 3
           MGA RKLKTHRRNQRW D+AYK SHLGNEWKKPFA
Sbjct: 1   MGAGRKLKTHRRNQRWADKAYKKSHLGNEWKKPFA 35


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