BLASTX nr result
ID: Dioscorea21_contig00034183
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Dioscorea21_contig00034183 (338 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_004156879.1| PREDICTED: pentatricopeptide repeat-containi... 89 4e-16 ref|XP_004152353.1| PREDICTED: pentatricopeptide repeat-containi... 89 4e-16 ref|XP_002305285.1| predicted protein [Populus trichocarpa] gi|2... 87 1e-15 ref|XP_003538658.1| PREDICTED: pentatricopeptide repeat-containi... 86 2e-15 ref|XP_003516732.1| PREDICTED: pentatricopeptide repeat-containi... 84 9e-15 >ref|XP_004156879.1| PREDICTED: pentatricopeptide repeat-containing protein At1g52640, mitochondrial-like [Cucumis sativus] Length = 529 Score = 89.0 bits (219), Expect = 4e-16 Identities = 42/85 (49%), Positives = 59/85 (69%) Frame = -1 Query: 263 TMASLAPSPSLTDVVNDLCRILSDRRAAHHELEPALLPFSPHLSSDLVDHVLRRCRNLSL 84 T A P+L +V+++ RILSDRR HH+LE L FS ++S+DLV+ VL+RC+N++ Sbjct: 37 TEARAGSDPTLPFLVSEISRILSDRRNPHHDLEVGLSSFSSNVSTDLVEQVLKRCKNIAF 96 Query: 83 SSHRFYLWALRHPSFRPSPHSLSIL 9 S+HRF+LWA R P F PS S I+ Sbjct: 97 SAHRFFLWAKRIPGFEPSDDSYHIV 121 >ref|XP_004152353.1| PREDICTED: pentatricopeptide repeat-containing protein At1g52640, mitochondrial-like [Cucumis sativus] Length = 529 Score = 89.0 bits (219), Expect = 4e-16 Identities = 42/85 (49%), Positives = 59/85 (69%) Frame = -1 Query: 263 TMASLAPSPSLTDVVNDLCRILSDRRAAHHELEPALLPFSPHLSSDLVDHVLRRCRNLSL 84 T A P+L +V+++ RILSDRR HH+LE L FS ++S+DLV+ VL+RC+N++ Sbjct: 37 TEARAGSDPTLPFLVSEISRILSDRRNPHHDLEVGLSSFSSNVSTDLVEQVLKRCKNIAF 96 Query: 83 SSHRFYLWALRHPSFRPSPHSLSIL 9 S+HRF+LWA R P F PS S I+ Sbjct: 97 SAHRFFLWAKRIPGFEPSDDSYHIV 121 >ref|XP_002305285.1| predicted protein [Populus trichocarpa] gi|222848249|gb|EEE85796.1| predicted protein [Populus trichocarpa] Length = 523 Score = 87.0 bits (214), Expect = 1e-15 Identities = 42/87 (48%), Positives = 58/87 (66%) Frame = -1 Query: 263 TMASLAPSPSLTDVVNDLCRILSDRRAAHHELEPALLPFSPHLSSDLVDHVLRRCRNLSL 84 T+ L P L +VN++ RILSD+R HH+LE +L FS +S++LV+ VL+RC+NL Sbjct: 34 TLTPLNQIPPLPGLVNEISRILSDQRNPHHDLETSLNAFSSEISTNLVEQVLKRCKNLGF 93 Query: 83 SSHRFYLWALRHPSFRPSPHSLSILAS 3 S+HRF+LWA R P F S S IL + Sbjct: 94 SAHRFFLWAKRIPGFEHSEESYHILVN 120 >ref|XP_003538658.1| PREDICTED: pentatricopeptide repeat-containing protein At1g52640, mitochondrial-like [Glycine max] Length = 523 Score = 86.3 bits (212), Expect = 2e-15 Identities = 41/77 (53%), Positives = 54/77 (70%) Frame = -1 Query: 239 PSLTDVVNDLCRILSDRRAAHHELEPALLPFSPHLSSDLVDHVLRRCRNLSLSSHRFYLW 60 P L D+VN++ R+LSD R HH+LE +L PFS +S++LVD VL+RC NL S+HRF+LW Sbjct: 41 PLLPDLVNEISRLLSDHRYPHHDLELSLNPFSAQISTNLVDQVLKRCNNLGFSAHRFFLW 100 Query: 59 ALRHPSFRPSPHSLSIL 9 A P F+ S S IL Sbjct: 101 AKSIPGFQHSVMSFHIL 117 >ref|XP_003516732.1| PREDICTED: pentatricopeptide repeat-containing protein At1g52640, mitochondrial-like [Glycine max] Length = 523 Score = 84.3 bits (207), Expect = 9e-15 Identities = 40/75 (53%), Positives = 54/75 (72%) Frame = -1 Query: 233 LTDVVNDLCRILSDRRAAHHELEPALLPFSPHLSSDLVDHVLRRCRNLSLSSHRFYLWAL 54 L D+VN++ R+LSD R HH+LE +L PFS LS++LV+ VL+RC+NL S+HRF+LWA Sbjct: 43 LPDLVNEISRLLSDHRYPHHDLELSLNPFSAQLSTNLVEQVLKRCKNLGFSAHRFFLWAK 102 Query: 53 RHPSFRPSPHSLSIL 9 P F+ S S IL Sbjct: 103 SIPGFQHSVMSFHIL 117