BLASTX nr result
ID: Dioscorea21_contig00034177
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dioscorea21_contig00034177
(398 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003519906.1| PREDICTED: probable galacturonosyltransferas... 67 1e-10
ref|XP_004157857.1| PREDICTED: probable galacturonosyltransferas... 62 2e-09
ref|XP_004141952.1| PREDICTED: LOW QUALITY PROTEIN: probable gal... 62 2e-09
ref|XP_004147816.1| PREDICTED: probable galacturonosyltransferas... 67 2e-09
ref|NP_564077.1| putative galacturonosyltransferase-like 1 [Arab... 59 3e-09
>ref|XP_003519906.1| PREDICTED: probable galacturonosyltransferase-like 2-like [Glycine
max]
Length = 350
Score = 67.4 bits (163), Expect(2) = 1e-10
Identities = 48/123 (39%), Positives = 63/123 (51%), Gaps = 4/123 (3%)
Frame = -2
Query: 397 LNMTMVAAFSYLQFNMNVLYDETVSS*ISTSLSRALDRGQSTVPLNRTRSYLAQLLPEYC 218
LN T+ +F YL F + D+ VS ISTS+ ALD PLN RSYL+ LLP C
Sbjct: 107 LNQTLTTSFPYLNFQIYPFDDDAVSRLISTSIRSALD-----CPLNYARSYLSTLLPP-C 160
Query: 217 AIRVIYLA*GVILC**NCQL*REFVKWW----ISDLCETDISCYFTPNFESNHELSPTLA 50
+++YL +IL +L + + C + S YFTP+F SN LS LA
Sbjct: 161 VAKIVYLDSDLILVDDISKLAETPLSGTAVLAAPEYCSANFSAYFTPSFWSNPSLSLVLA 220
Query: 49 GRR 41
RR
Sbjct: 221 NRR 223
Score = 23.1 bits (48), Expect(2) = 1e-10
Identities = 8/10 (80%), Positives = 9/10 (90%)
Frame = -1
Query: 32 CYFNMGVMVL 3
CYFN GVMV+
Sbjct: 227 CYFNTGVMVI 236
>ref|XP_004157857.1| PREDICTED: probable galacturonosyltransferase-like 2-like, partial
[Cucumis sativus]
Length = 363
Score = 62.4 bits (150), Expect(2) = 2e-09
Identities = 46/124 (37%), Positives = 64/124 (51%), Gaps = 4/124 (3%)
Frame = -2
Query: 397 LNMTMVAAFSYLQFNMNVLYDETVSS*ISTSLSRALDRGQSTVPLNRTRSYLAQLLPEYC 218
L T+ +F YL+F++ V+ ISTS+ ALD PLN R+YLA L+P +C
Sbjct: 123 LRFTIANSFPYLKFHVYPFDAAAVAGLISTSIRSALDS-----PLNYARNYLASLIP-HC 176
Query: 217 AIRVIYLA*GVILC**NCQL*R----EFVKWWISDLCETDISCYFTPNFESNHELSPTLA 50
RV+YL +IL +L E + C +++ YFTP F SN LS T A
Sbjct: 177 VKRVVYLDSDLILVDDIAKLAATPLGETAVLAAPEYCNANLTSYFTPTFWSNPSLSFTFA 236
Query: 49 GRRS 38
GR +
Sbjct: 237 GRNA 240
Score = 24.6 bits (52), Expect(2) = 2e-09
Identities = 9/11 (81%), Positives = 10/11 (90%)
Frame = -1
Query: 35 ACYFNMGVMVL 3
ACYFN GVMV+
Sbjct: 240 ACYFNTGVMVI 250
>ref|XP_004141952.1| PREDICTED: LOW QUALITY PROTEIN: probable
galacturonosyltransferase-like 2-like [Cucumis sativus]
Length = 352
Score = 62.4 bits (150), Expect(2) = 2e-09
Identities = 46/124 (37%), Positives = 64/124 (51%), Gaps = 4/124 (3%)
Frame = -2
Query: 397 LNMTMVAAFSYLQFNMNVLYDETVSS*ISTSLSRALDRGQSTVPLNRTRSYLAQLLPEYC 218
L T+ +F YL+F++ V+ ISTS+ ALD PLN R+YLA L+P +C
Sbjct: 112 LRFTIANSFPYLKFHVYPFDAAAVAGLISTSIRSALDS-----PLNYARNYLASLIP-HC 165
Query: 217 AIRVIYLA*GVILC**NCQL*R----EFVKWWISDLCETDISCYFTPNFESNHELSPTLA 50
RV+YL +IL +L E + C +++ YFTP F SN LS T A
Sbjct: 166 VKRVVYLDSDLILVDDIAKLAATPLGETAVLAAPEYCNANLTSYFTPTFWSNPSLSFTFA 225
Query: 49 GRRS 38
GR +
Sbjct: 226 GRNA 229
Score = 24.6 bits (52), Expect(2) = 2e-09
Identities = 9/11 (81%), Positives = 10/11 (90%)
Frame = -1
Query: 35 ACYFNMGVMVL 3
ACYFN GVMV+
Sbjct: 229 ACYFNTGVMVI 239
>ref|XP_004147816.1| PREDICTED: probable galacturonosyltransferase-like 1-like [Cucumis
sativus] gi|449477010|ref|XP_004154902.1| PREDICTED:
probable galacturonosyltransferase-like 1-like [Cucumis
sativus]
Length = 342
Score = 66.6 bits (161), Expect = 2e-09
Identities = 49/124 (39%), Positives = 64/124 (51%), Gaps = 4/124 (3%)
Frame = -2
Query: 397 LNMTMVAAFSYLQFNMNVLYDETVSS*ISTSLSRALDRGQSTVPLNRTRSYLAQLLPEYC 218
L T+ +F YL+F + DE VS ISTS+ ALD PLN RSYLA LLP C
Sbjct: 102 LRATLSHSFPYLKFQLYPFDDEAVSRLISTSIRSALD-----CPLNYARSYLANLLPT-C 155
Query: 217 AIRVIYLA*GVILC**NCQL*REFVK----WWISDLCETDISCYFTPNFESNHELSPTLA 50
RV+YL +IL +L + + C + + YFTP+F SN LS T A
Sbjct: 156 VARVVYLDSDLILVDDIAKLAAHSLGADSVLAAPEYCNANFTAYFTPSFWSNPSLSLTFA 215
Query: 49 GRRS 38
R++
Sbjct: 216 NRKA 219
>ref|NP_564077.1| putative galacturonosyltransferase-like 1 [Arabidopsis thaliana]
gi|75174914|sp|Q9LN68.1|GATL1_ARATH RecName:
Full=Probable galacturonosyltransferase-like 1; AltName:
Full=Protein GAOLAOZHUANGREN 1; AltName: Full=Protein
PARVUS gi|8778448|gb|AAF79456.1|AC025808_38 F18O14.2
[Arabidopsis thaliana]
gi|15983452|gb|AAL11594.1|AF424600_1 At1g19300/F18O14_13
[Arabidopsis thaliana] gi|94442445|gb|ABF19010.1|
At1g19300 [Arabidopsis thaliana]
gi|332191706|gb|AEE29827.1| putative
galacturonosyltransferase-like 1 [Arabidopsis thaliana]
Length = 351
Score = 59.3 bits (142), Expect(2) = 3e-09
Identities = 48/131 (36%), Positives = 63/131 (48%), Gaps = 11/131 (8%)
Frame = -2
Query: 397 LNMTMVAAFSYLQFNMNVLYDETVSS*ISTSLSRALDRGQSTVPLNRTRSYLAQLLPEYC 218
L T+ ++F YL F + V +VS IS+S+ ALD PLN RSYLA LLP C
Sbjct: 111 LRATISSSFPYLDFTVYVFNVSSVSRLISSSIRSALD-----CPLNYARSYLADLLPP-C 164
Query: 217 AIRVIYLA*GVILC**NCQL*REFVKWWISDL-----------CETDISCYFTPNFESNH 71
RV+YL +IL + K +DL C + + YFT F SN
Sbjct: 165 VRRVVYLDSDLILV-------DDIAKLAATDLGRDSVLAAPEYCNANFTSYFTSTFWSNP 217
Query: 70 ELSPTLAGRRS 38
LS T A R++
Sbjct: 218 TLSLTFADRKA 228
Score = 26.6 bits (57), Expect(2) = 3e-09
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = -1
Query: 38 KACYFNMGVMVL 3
KACYFN GVMV+
Sbjct: 227 KACYFNTGVMVI 238