BLASTX nr result

ID: Dioscorea21_contig00034168 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00034168
         (298 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK47791.1| unknown [Lotus japonicus]                              100   2e-19
gb|AFK48583.1| unknown [Lotus japonicus]                               97   1e-18
ref|XP_003550182.1| PREDICTED: uncharacterized protein LOC100820...    94   9e-18
gb|AFK38763.1| unknown [Medicago truncatula]                           93   3e-17
ref|XP_003588776.1| U11/U12 small nuclear ribonucleoprotein 25 k...    93   3e-17

>gb|AFK47791.1| unknown [Lotus japonicus]
          Length = 269

 Score =  100 bits (248), Expect = 2e-19
 Identities = 45/81 (55%), Positives = 58/81 (71%)
 Frame = +3

Query: 3   AAVWELKIAVEDVFDRPDEEGGVVISWPHVWGLFCLCYGDQKLIDDKAILRNFGIKDGDQ 182
           A++ ELK AVE VF    E+G   ISWPHVWG FCLCY  QKL+ ++  LRN+GIKDGD+
Sbjct: 68  ASIAELKDAVEAVFSHMPEKGPAKISWPHVWGQFCLCYDGQKLVTEEDYLRNYGIKDGDE 127

Query: 183 LRFMRHHSGDINIVQNRPRRR 245
           L FMRH S +  + + RP++R
Sbjct: 128 LHFMRHVSNNCTVRRKRPKKR 148


>gb|AFK48583.1| unknown [Lotus japonicus]
          Length = 220

 Score = 97.1 bits (240), Expect = 1e-18
 Identities = 44/81 (54%), Positives = 57/81 (70%)
 Frame = +3

Query: 3   AAVWELKIAVEDVFDRPDEEGGVVISWPHVWGLFCLCYGDQKLIDDKAILRNFGIKDGDQ 182
           A++ ELK AVE VF    E+G   ISWPHVWG FCLCY  QKL+ ++  LRN+GIKDGD+
Sbjct: 68  ASIAELKDAVEAVFSHMPEKGPAKISWPHVWGQFCLCYDGQKLVTEEDYLRNYGIKDGDE 127

Query: 183 LRFMRHHSGDINIVQNRPRRR 245
           L FM H S +  + + RP++R
Sbjct: 128 LHFMCHVSNNCTVRRKRPKKR 148


>ref|XP_003550182.1| PREDICTED: uncharacterized protein LOC100820296 [Glycine max]
          Length = 275

 Score = 94.4 bits (233), Expect = 9e-18
 Identities = 46/88 (52%), Positives = 58/88 (65%)
 Frame = +3

Query: 3   AAVWELKIAVEDVFDRPDEEGGVVISWPHVWGLFCLCYGDQKLIDDKAILRNFGIKDGDQ 182
           A V ELK AVE VF     +G   ISW HVWG FCLCY  QKL+ +K  LRN+GIKDGDQ
Sbjct: 72  ATVAELKDAVEAVFSHVPHKGPAKISWAHVWGQFCLCYDGQKLVTEKDNLRNYGIKDGDQ 131

Query: 183 LRFMRHHSGDINIVQNRPRRREKVPRQH 266
           LRF+RH + +  + + R ++R    +QH
Sbjct: 132 LRFIRHVTNNCCVQRKRLKKRVVYLKQH 159


>gb|AFK38763.1| unknown [Medicago truncatula]
          Length = 226

 Score = 92.8 bits (229), Expect = 3e-17
 Identities = 44/92 (47%), Positives = 58/92 (63%)
 Frame = +3

Query: 3   AAVWELKIAVEDVFDRPDEEGGVVISWPHVWGLFCLCYGDQKLIDDKAILRNFGIKDGDQ 182
           A + ELK AVE VF    + G   ISWPHVWG FCLCY  QKL+ +K  L+N+G+KD DQ
Sbjct: 68  ATIAELKDAVEGVFSYMPQHGPAKISWPHVWGQFCLCYDGQKLVTEKDYLKNYGVKDSDQ 127

Query: 183 LRFMRHHSGDINIVQNRPRRREKVPRQHLLLT 278
           L F+RH S +    + R ++R    +QH  L+
Sbjct: 128 LHFIRHASNNCGARRKRSKKRVFHLKQHRRLS 159


>ref|XP_003588776.1| U11/U12 small nuclear ribonucleoprotein 25 kDa protein [Medicago
           truncatula] gi|355477824|gb|AES59027.1| U11/U12 small
           nuclear ribonucleoprotein 25 kDa protein [Medicago
           truncatula]
          Length = 266

 Score = 92.8 bits (229), Expect = 3e-17
 Identities = 44/92 (47%), Positives = 58/92 (63%)
 Frame = +3

Query: 3   AAVWELKIAVEDVFDRPDEEGGVVISWPHVWGLFCLCYGDQKLIDDKAILRNFGIKDGDQ 182
           A + ELK AVE VF    + G   ISWPHVWG FCLCY  QKL+ +K  L+N+G+KD DQ
Sbjct: 68  ATIAELKDAVEGVFSYMPQHGPAKISWPHVWGQFCLCYDGQKLVTEKDYLKNYGVKDSDQ 127

Query: 183 LRFMRHHSGDINIVQNRPRRREKVPRQHLLLT 278
           L F+RH S +    + R ++R    +QH  L+
Sbjct: 128 LHFIRHASNNCGARRKRSKKRVFHLKQHRRLS 159


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