BLASTX nr result

ID: Dioscorea21_contig00034136 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00034136
         (506 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI38177.3| unnamed protein product [Vitis vinifera]               89   4e-16
ref|XP_002263613.1| PREDICTED: zinc finger protein CONSTANS-LIKE...    89   4e-16
ref|XP_002893503.1| zinc finger (B-box type) family protein [Ara...    82   4e-14
ref|XP_002275375.2| PREDICTED: zinc finger protein CONSTANS-LIKE...    82   5e-14
emb|CBI21298.3| unnamed protein product [Vitis vinifera]               82   5e-14

>emb|CBI38177.3| unnamed protein product [Vitis vinifera]
          Length = 362

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 58/135 (42%), Positives = 71/135 (52%), Gaps = 5/135 (3%)
 Frame = +3

Query: 30  ANSGNSNWTAVRPTNVLHDTEPNH--AIKEISFTQHPVI---SSKQFKALNKIDSQQLAQ 194
           A S ++N    RP++     +P      K+I  T+  ++    S +  A  K+D +QLAQ
Sbjct: 253 ATSESNNLPIARPSSGSAFAKPKSFSGSKDIELTEQSILMRGESGRTAATTKVDLEQLAQ 312

Query: 195 NRGNAMQRYKEKRKTRRYDKHIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRYESRKA 374
           NRGNAM RYKEK+KTRRYDKHI                               RYESRKA
Sbjct: 313 NRGNAMLRYKEKKKTRRYDKHI-------------------------------RYESRKA 341

Query: 375 RADTRMRVKGRFVKA 419
           RADTR RVKGRFVKA
Sbjct: 342 RADTRKRVKGRFVKA 356


>ref|XP_002263613.1| PREDICTED: zinc finger protein CONSTANS-LIKE 14-like [Vitis
           vinifera]
          Length = 474

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 58/135 (42%), Positives = 71/135 (52%), Gaps = 5/135 (3%)
 Frame = +3

Query: 30  ANSGNSNWTAVRPTNVLHDTEPNH--AIKEISFTQHPVI---SSKQFKALNKIDSQQLAQ 194
           A S ++N    RP++     +P      K+I  T+  ++    S +  A  K+D +QLAQ
Sbjct: 365 ATSESNNLPIARPSSGSAFAKPKSFSGSKDIELTEQSILMRGESGRTAATTKVDLEQLAQ 424

Query: 195 NRGNAMQRYKEKRKTRRYDKHIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRYESRKA 374
           NRGNAM RYKEK+KTRRYDKHI                               RYESRKA
Sbjct: 425 NRGNAMLRYKEKKKTRRYDKHI-------------------------------RYESRKA 453

Query: 375 RADTRMRVKGRFVKA 419
           RADTR RVKGRFVKA
Sbjct: 454 RADTRKRVKGRFVKA 468


>ref|XP_002893503.1| zinc finger (B-box type) family protein [Arabidopsis lyrata subsp.
           lyrata] gi|297339345|gb|EFH69762.1| zinc finger (B-box
           type) family protein [Arabidopsis lyrata subsp. lyrata]
          Length = 428

 Score = 82.4 bits (202), Expect = 4e-14
 Identities = 51/110 (46%), Positives = 63/110 (57%), Gaps = 2/110 (1%)
 Frame = +3

Query: 96  NHAIKEISFTQHPVISSKQFKAL--NKIDSQQLAQNRGNAMQRYKEKRKTRRYDKHIXXX 269
           +++  ++ FT+H   +S +   L   K D ++LAQNRGNAMQRYKEKRKTRRYDK I   
Sbjct: 344 SNSSSDLHFTEHIAGTSCKTTRLVATKADLERLAQNRGNAMQRYKEKRKTRRYDKTI--- 400

Query: 270 XXXXXXXXXXXXXXXXXXXXXXXXXXXXRYESRKARADTRMRVKGRFVKA 419
                                       RYESRKARADTR+RV+GRFVKA
Sbjct: 401 ----------------------------RYESRKARADTRLRVRGRFVKA 422


>ref|XP_002275375.2| PREDICTED: zinc finger protein CONSTANS-LIKE 14-like [Vitis
           vinifera]
          Length = 521

 Score = 82.0 bits (201), Expect = 5e-14
 Identities = 53/127 (41%), Positives = 66/127 (51%), Gaps = 1/127 (0%)
 Frame = +3

Query: 42  NSNWTAVRPTNVLHDTEPN-HAIKEISFTQHPVISSKQFKALNKIDSQQLAQNRGNAMQR 218
           ++N   V P++     EPN ++IK + F    + S         +D + LAQNRG+AM R
Sbjct: 423 SNNIPIVGPSSESWTAEPNTNSIKSMQFKDLLIGSGTARTETTNVDMELLAQNRGHAMLR 482

Query: 219 YKEKRKTRRYDKHIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRYESRKARADTRMRV 398
           YKEK+KTRRY+KHI                               RYESRKARADTR RV
Sbjct: 483 YKEKKKTRRYEKHI-------------------------------RYESRKARADTRKRV 511

Query: 399 KGRFVKA 419
           KGRFVKA
Sbjct: 512 KGRFVKA 518


>emb|CBI21298.3| unnamed protein product [Vitis vinifera]
          Length = 195

 Score = 82.0 bits (201), Expect = 5e-14
 Identities = 53/127 (41%), Positives = 66/127 (51%), Gaps = 1/127 (0%)
 Frame = +3

Query: 42  NSNWTAVRPTNVLHDTEPN-HAIKEISFTQHPVISSKQFKALNKIDSQQLAQNRGNAMQR 218
           ++N   V P++     EPN ++IK + F    + S         +D + LAQNRG+AM R
Sbjct: 97  SNNIPIVGPSSESWTAEPNTNSIKSMQFKDLLIGSGTARTETTNVDMELLAQNRGHAMLR 156

Query: 219 YKEKRKTRRYDKHIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRYESRKARADTRMRV 398
           YKEK+KTRRY+KHI                               RYESRKARADTR RV
Sbjct: 157 YKEKKKTRRYEKHI-------------------------------RYESRKARADTRKRV 185

Query: 399 KGRFVKA 419
           KGRFVKA
Sbjct: 186 KGRFVKA 192


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