BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00034123
         (266 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADB85091.1| ribulose 1,5-bisphosphate carboxylase small subun...   168   5e-40
gb|AFK48034.1| unknown [Lotus japonicus]                              159   3e-37
ref|XP_002532149.1| Ribulose bisphosphate carboxylase small chai...   159   3e-37
sp|Q96542.1|RBS_BETVE RecName: Full=Ribulose bisphosphate carbox...   158   5e-37
dbj|BAI53119.1| ribulose-1,5-bisphosphate carboxylase/oxygenase ...   158   5e-37

>gb|ADB85091.1| ribulose 1,5-bisphosphate carboxylase small subunit [Jatropha
           curcas]
          Length = 181

 Score =  168 bits (425), Expect = 5e-40
 Identities = 76/88 (86%), Positives = 81/88 (92%)
 Frame = -3

Query: 264 YLPPLTREQLIKEVEYLLRSNLIPCLEFELKDGFVYRENNRSPGYYDGRYWTMWKLPMFG 85
           YLPPLTREQL KEVEYLLRS  +PCLEFEL+ GFVYRENNRSPGYYDGRYWTMWKLPMFG
Sbjct: 75  YLPPLTREQLAKEVEYLLRSGWVPCLEFELEHGFVYRENNRSPGYYDGRYWTMWKLPMFG 134

Query: 84  CTDAVQVVNELDEAAKAYPTAFIRIIGF 1
           CTDAVQV+NELDEA KA+P  F+RIIGF
Sbjct: 135 CTDAVQVLNELDEAIKAHPNGFVRIIGF 162


>gb|AFK48034.1| unknown [Lotus japonicus]
          Length = 181

 Score =  159 bits (401), Expect = 3e-37
 Identities = 70/88 (79%), Positives = 78/88 (88%)
 Frame = -3

Query: 264 YLPPLTREQLIKEVEYLLRSNLIPCLEFELKDGFVYRENNRSPGYYDGRYWTMWKLPMFG 85
           YLPPLT EQL+KEVEYLLR   +PCLEFE + GFVYREN++SPGYYDGRYWTMWKLPMFG
Sbjct: 75  YLPPLTTEQLLKEVEYLLRKGWVPCLEFETEKGFVYRENHKSPGYYDGRYWTMWKLPMFG 134

Query: 84  CTDAVQVVNELDEAAKAYPTAFIRIIGF 1
           C+DA QV+ ELDEA KAYP AF+RIIGF
Sbjct: 135 CSDATQVLKELDEAVKAYPNAFVRIIGF 162


>ref|XP_002532149.1| Ribulose bisphosphate carboxylase small chain, chloroplast
           precursor, putative [Ricinus communis]
           gi|223528159|gb|EEF30223.1| Ribulose bisphosphate
           carboxylase small chain, chloroplast precursor, putative
           [Ricinus communis]
          Length = 185

 Score =  159 bits (401), Expect = 3e-37
 Identities = 72/88 (81%), Positives = 78/88 (88%)
 Frame = -3

Query: 264 YLPPLTREQLIKEVEYLLRSNLIPCLEFELKDGFVYRENNRSPGYYDGRYWTMWKLPMFG 85
           YLP LTREQL KEVEYLLR   +PCLEFEL+ GFVYREN RSPGYYDGRYWTMWKLPMFG
Sbjct: 76  YLPDLTREQLAKEVEYLLRKGWVPCLEFELEHGFVYRENARSPGYYDGRYWTMWKLPMFG 135

Query: 84  CTDAVQVVNELDEAAKAYPTAFIRIIGF 1
           C+DAVQV+ ELDEA KAYP +F+RIIGF
Sbjct: 136 CSDAVQVLKELDEAIKAYPNSFVRIIGF 163


>sp|Q96542.1|RBS_BETVE RecName: Full=Ribulose bisphosphate carboxylase small chain,
           chloroplastic; Short=RuBisCO small subunit; Flags:
           Precursor gi|1536889|emb|CAA69102.1|
           ribulose-bisphosphate carboxylase [Betula pendula]
          Length = 182

 Score =  158 bits (399), Expect = 5e-37
 Identities = 71/88 (80%), Positives = 79/88 (89%)
 Frame = -3

Query: 264 YLPPLTREQLIKEVEYLLRSNLIPCLEFELKDGFVYRENNRSPGYYDGRYWTMWKLPMFG 85
           YLPPL+ EQL KEV+YLLR NLIPCLEFEL+ GFVYRE+NRSPGYYDGRYWTMWKLPMFG
Sbjct: 76  YLPPLSSEQLAKEVDYLLRKNLIPCLEFELEHGFVYREHNRSPGYYDGRYWTMWKLPMFG 135

Query: 84  CTDAVQVVNELDEAAKAYPTAFIRIIGF 1
           C D+ QV+ EL+E  KAYP+AFIRIIGF
Sbjct: 136 CNDSSQVLKELEECKKAYPSAFIRIIGF 163


>dbj|BAI53119.1| ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit
           [Eucalyptus globulus]
          Length = 181

 Score =  158 bits (399), Expect = 5e-37
 Identities = 68/88 (77%), Positives = 79/88 (89%)
 Frame = -3

Query: 264 YLPPLTREQLIKEVEYLLRSNLIPCLEFELKDGFVYRENNRSPGYYDGRYWTMWKLPMFG 85
           YLPPL+RE+L+KE+EYLLR N +PCLEFEL+ GFVYR+N++SPGYYDGRYWTMWKLPMFG
Sbjct: 75  YLPPLSREELLKEIEYLLRMNWVPCLEFELEKGFVYRDNHKSPGYYDGRYWTMWKLPMFG 134

Query: 84  CTDAVQVVNELDEAAKAYPTAFIRIIGF 1
           CTD +QV  ELDEA K YP AF+RIIGF
Sbjct: 135 CTDPLQVFKELDEAIKTYPNAFVRIIGF 162