BLASTX nr result

ID: Dioscorea21_contig00034117 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00034117
         (464 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EAZ07996.1| hypothetical protein OsI_30258 [Oryza sativa Indi...   103   1e-20
gb|EEE69144.1| hypothetical protein OsJ_28268 [Oryza sativa Japo...   103   1e-20
emb|CCA66020.1| hypothetical protein [Beta vulgaris subsp. vulga...   103   2e-20
gb|AAD12028.1| putative non-LTR retroelement reverse transcripta...   103   2e-20
dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like ...   103   2e-20

>gb|EAZ07996.1| hypothetical protein OsI_30258 [Oryza sativa Indica Group]
          Length = 633

 Score =  103 bits (258), Expect = 1e-20
 Identities = 59/150 (39%), Positives = 86/150 (57%)
 Frame = -3

Query: 453 DNDGISHTEKFQIDSILLGHFSSLWNFSEDRSVEDYLVIIPDDIPVLDSSQIAFLNRTVT 274
           D+DG  H+   +++S+   +F  L  F+ D S+ D+  +     P +  +    L +TV+
Sbjct: 452 DSDGTVHSTTKELESMATEYFQRL--FTADPSI-DHSRVTSLIKPKVTDAMNEELCKTVS 508

Query: 273 KEEVYNIILSFPEGKSPGPDGLNVEFFKFFWEDLSDIFMKAVNHFFSNAVMPKAWGKTFI 94
           +EE+ N +      K+PGPDG    F++  W  L D  ++AV  FFS+  MP    +T I
Sbjct: 509 EEEIANALFQIGPLKAPGPDGFPGRFYQRNWAILKDDIVRAVQEFFSSGTMPSGVNETAI 568

Query: 93  VLIPKKEHPKAAADFRPISLCNVAYKIVTK 4
           VLIPK E P+   DFRPISLCNV YKIV+K
Sbjct: 569 VLIPKTEQPQELKDFRPISLCNVVYKIVSK 598


>gb|EEE69144.1| hypothetical protein OsJ_28268 [Oryza sativa Japonica Group]
          Length = 1256

 Score =  103 bits (257), Expect = 1e-20
 Identities = 59/150 (39%), Positives = 85/150 (56%)
 Frame = -3

Query: 453 DNDGISHTEKFQIDSILLGHFSSLWNFSEDRSVEDYLVIIPDDIPVLDSSQIAFLNRTVT 274
           D+DG  H    +++S+   +F  L  F+ D S+ D+  +     P +  +    L +TV+
Sbjct: 452 DSDGTVHNTTKELESMATEYFQRL--FTADPSI-DHSRVTSLIKPKVTDAMNEELCKTVS 508

Query: 273 KEEVYNIILSFPEGKSPGPDGLNVEFFKFFWEDLSDIFMKAVNHFFSNAVMPKAWGKTFI 94
           +EE+ N +      K+PGPDG    F++  W  L D  ++AV  FFS+  MP    +T I
Sbjct: 509 EEEIANALFQIGPLKAPGPDGFPGRFYQRNWAILKDDIVRAVQEFFSSGTMPSGVNETAI 568

Query: 93  VLIPKKEHPKAAADFRPISLCNVAYKIVTK 4
           VLIPK E P+   DFRPISLCNV YKIV+K
Sbjct: 569 VLIPKTEQPQELKDFRPISLCNVVYKIVSK 598


>emb|CCA66020.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1365

 Score =  103 bits (256), Expect = 2e-20
 Identities = 56/145 (38%), Positives = 84/145 (57%), Gaps = 1/145 (0%)
 Frame = -3

Query: 432 TEKFQIDSILLGHFSSLWNFSE-DRSVEDYLVIIPDDIPVLDSSQIAFLNRTVTKEEVYN 256
           + K  I    LG+F+ ++  S+  +   + L  I   IP +D  Q   L + VT+EEV N
Sbjct: 389 SSKQDIQGEFLGYFADIFQGSQHSQEYWEELDGIRHLIPQIDLMQREDLIKPVTREEVRN 448

Query: 255 IILSFPEGKSPGPDGLNVEFFKFFWEDLSDIFMKAVNHFFSNAVMPKAWGKTFIVLIPKK 76
           ++      K+PGPDG+   F++  W  + +   +AV+HFF+   + + W +T I LIPK 
Sbjct: 449 VVFQMGSLKAPGPDGIPAIFYQKHWSIVGEDIWRAVSHFFTTGYILQEWNQTNICLIPKV 508

Query: 75  EHPKAAADFRPISLCNVAYKIVTKI 1
           E P+ A  FRPISLCNV YKI++KI
Sbjct: 509 ERPEQACQFRPISLCNVIYKIISKI 533


>gb|AAD12028.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1447

 Score =  103 bits (256), Expect = 2e-20
 Identities = 47/97 (48%), Positives = 61/97 (62%)
 Frame = -3

Query: 291  LNRTVTKEEVYNIILSFPEGKSPGPDGLNVEFFKFFWEDLSDIFMKAVNHFFSNAVMPKA 112
            L R VT EE+  ++ S P  KSPGPDG   EFFK  WE L + F+ A+  FF+   +PK 
Sbjct: 857  LTRVVTAEEIKKVLFSMPNDKSPGPDGFTSEFFKATWEILGNEFILAIQSFFAKGFLPKG 916

Query: 111  WGKTFIVLIPKKEHPKAAADFRPISLCNVAYKIVTKI 1
               T + LIPKK+  K   D+RPIS CNV YK+++KI
Sbjct: 917  INTTILALIPKKKEAKEMKDYRPISCCNVIYKVISKI 953


>dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like protein
           [Arabidopsis thaliana]
          Length = 1223

 Score =  103 bits (256), Expect = 2e-20
 Identities = 61/167 (36%), Positives = 86/167 (51%), Gaps = 14/167 (8%)
 Frame = -3

Query: 459 IVDNDGISHTEKFQIDSILLGHFSSLWNFSEDRSVEDYLVIIPDD------------IPV 316
           I+ NDGI  T+  +I +              +R   ++L +IP+D            +PV
Sbjct: 392 ILSNDGIVKTKGDEIKA------------EAERFFREFLQLIPNDFEGVTITELQQLLPV 439

Query: 315 L--DSSQIAFLNRTVTKEEVYNIILSFPEGKSPGPDGLNVEFFKFFWEDLSDIFMKAVNH 142
              D+ Q + + R VT EE+  ++   P  KSPGPDG   EFFK  WE + D F  AV  
Sbjct: 440 RCSDADQQSLI-RPVTAEEIRKVLFRMPSDKSPGPDGYTSEFFKATWEIIGDEFTLAVQS 498

Query: 141 FFSNAVMPKAWGKTFIVLIPKKEHPKAAADFRPISLCNVAYKIVTKI 1
           FF+   +PK    T + LIPKK   +   D+RPIS CNV YK+++KI
Sbjct: 499 FFTKGFLPKGINSTILALIPKKTEAREMKDYRPISCCNVLYKVISKI 545


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