BLASTX nr result

ID: Dioscorea21_contig00034109 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00034109
         (414 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003577757.1| PREDICTED: DNA polymerase delta catalytic su...   218   4e-55
ref|XP_002450450.1| hypothetical protein SORBIDRAFT_05g005680 [S...   217   9e-55
ref|XP_002451581.1| hypothetical protein SORBIDRAFT_04g004200 [S...   217   9e-55
gb|AFW65465.1| hypothetical protein ZEAMMB73_774459 [Zea mays]        215   3e-54
ref|XP_002264385.1| PREDICTED: DNA polymerase delta catalytic su...   213   1e-53

>ref|XP_003577757.1| PREDICTED: DNA polymerase delta catalytic subunit-like [Brachypodium
            distachyon]
          Length = 1106

 Score =  218 bits (555), Expect = 4e-55
 Identities = 100/109 (91%), Positives = 106/109 (97%)
 Frame = -1

Query: 414  ISTPSNSGIMKFAKKQLSCLGCKTVISGEDQTLCSHCKGREAELYCKTVTNVADLEMLFG 235
            ISTPSNSGIMKFAKKQL+CLGCK VISG +QTLCSHCKGREAELYCKTV NV+DLEMLFG
Sbjct: 998  ISTPSNSGIMKFAKKQLTCLGCKAVISGPNQTLCSHCKGREAELYCKTVANVSDLEMLFG 1057

Query: 234  KLWTQCQECQGSLHQDVLCTSRDCPIFYRRKKAQKDMAEARMQLDRWNF 88
            KLWTQCQECQGSLHQDVLCTSRDCPIFYRR+KAQKDMAEAR+QLDRW+F
Sbjct: 1058 KLWTQCQECQGSLHQDVLCTSRDCPIFYRRRKAQKDMAEARVQLDRWDF 1106


>ref|XP_002450450.1| hypothetical protein SORBIDRAFT_05g005680 [Sorghum bicolor]
            gi|241936293|gb|EES09438.1| hypothetical protein
            SORBIDRAFT_05g005680 [Sorghum bicolor]
          Length = 1099

 Score =  217 bits (552), Expect = 9e-55
 Identities = 99/109 (90%), Positives = 105/109 (96%)
 Frame = -1

Query: 414  ISTPSNSGIMKFAKKQLSCLGCKTVISGEDQTLCSHCKGREAELYCKTVTNVADLEMLFG 235
            ISTPSNSGIMKFAKKQL+CLGCK VISG  QTLCSHCKGREAELYCKTV NV+DLEMLFG
Sbjct: 991  ISTPSNSGIMKFAKKQLTCLGCKAVISGASQTLCSHCKGREAELYCKTVANVSDLEMLFG 1050

Query: 234  KLWTQCQECQGSLHQDVLCTSRDCPIFYRRKKAQKDMAEARMQLDRWNF 88
            +LWTQCQECQGSLHQDVLCTSRDCPIFYRR+KAQKDMAEAR+QLDRW+F
Sbjct: 1051 RLWTQCQECQGSLHQDVLCTSRDCPIFYRRRKAQKDMAEARLQLDRWDF 1099


>ref|XP_002451581.1| hypothetical protein SORBIDRAFT_04g004200 [Sorghum bicolor]
            gi|241931412|gb|EES04557.1| hypothetical protein
            SORBIDRAFT_04g004200 [Sorghum bicolor]
          Length = 1101

 Score =  217 bits (552), Expect = 9e-55
 Identities = 99/109 (90%), Positives = 105/109 (96%)
 Frame = -1

Query: 414  ISTPSNSGIMKFAKKQLSCLGCKTVISGEDQTLCSHCKGREAELYCKTVTNVADLEMLFG 235
            ISTPSNSGIMKFAKKQL+CLGCK VISG  QTLCSHCKGREAELYCKTV NV+DLEMLFG
Sbjct: 993  ISTPSNSGIMKFAKKQLTCLGCKAVISGASQTLCSHCKGREAELYCKTVANVSDLEMLFG 1052

Query: 234  KLWTQCQECQGSLHQDVLCTSRDCPIFYRRKKAQKDMAEARMQLDRWNF 88
            +LWTQCQECQGSLHQDVLCTSRDCPIFYRR+KAQKDMAEAR+QLDRW+F
Sbjct: 1053 RLWTQCQECQGSLHQDVLCTSRDCPIFYRRRKAQKDMAEARLQLDRWDF 1101


>gb|AFW65465.1| hypothetical protein ZEAMMB73_774459 [Zea mays]
          Length = 373

 Score =  215 bits (548), Expect = 3e-54
 Identities = 98/109 (89%), Positives = 104/109 (95%)
 Frame = -1

Query: 414 ISTPSNSGIMKFAKKQLSCLGCKTVISGEDQTLCSHCKGREAELYCKTVTNVADLEMLFG 235
           ISTPSNSGIMKFAKKQL+CLGCK VISG  QTLCSHCKGREAELYCKTV NV+DLEMLFG
Sbjct: 265 ISTPSNSGIMKFAKKQLTCLGCKAVISGASQTLCSHCKGREAELYCKTVANVSDLEMLFG 324

Query: 234 KLWTQCQECQGSLHQDVLCTSRDCPIFYRRKKAQKDMAEARMQLDRWNF 88
           +LWTQCQECQGSLHQDVLCTSRDCPIFYRR+KAQKDM EAR+QLDRW+F
Sbjct: 325 RLWTQCQECQGSLHQDVLCTSRDCPIFYRRRKAQKDMTEARLQLDRWDF 373


>ref|XP_002264385.1| PREDICTED: DNA polymerase delta catalytic subunit [Vitis vinifera]
            gi|296088521|emb|CBI37512.3| unnamed protein product
            [Vitis vinifera]
          Length = 1089

 Score =  213 bits (543), Expect = 1e-53
 Identities = 96/109 (88%), Positives = 105/109 (96%)
 Frame = -1

Query: 414  ISTPSNSGIMKFAKKQLSCLGCKTVISGEDQTLCSHCKGREAELYCKTVTNVADLEMLFG 235
            ISTPSNSGIMKFAKKQLSC+GCK +IS  D+TLCSHCKGREAELYCKTV NV++LEMLFG
Sbjct: 981  ISTPSNSGIMKFAKKQLSCIGCKALISNTDRTLCSHCKGREAELYCKTVANVSELEMLFG 1040

Query: 234  KLWTQCQECQGSLHQDVLCTSRDCPIFYRRKKAQKDMAEARMQLDRWNF 88
            +LWTQCQECQGSLHQDVLCTSRDCPIFYRRKKAQKDMAEA++QL+RWNF
Sbjct: 1041 RLWTQCQECQGSLHQDVLCTSRDCPIFYRRKKAQKDMAEAKLQLERWNF 1089


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