BLASTX nr result

ID: Dioscorea21_contig00034108 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00034108
         (316 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004133708.1| PREDICTED: 3-deoxy-manno-octulosonate cytidy...    87   1e-15
gb|ACF06611.1| 3-deoxy-manno-octulosonate cytidylyltransferase/n...    87   2e-15
ref|XP_002894417.1| cytidylyltransferase family [Arabidopsis lyr...    86   2e-15
ref|XP_002517281.1| cmp-2-keto-3-deoctulosonate (cmp-kdo) cytidy...    86   2e-15
ref|XP_002329094.1| predicted protein [Populus trichocarpa] gi|2...    85   7e-15

>ref|XP_004133708.1| PREDICTED: 3-deoxy-manno-octulosonate cytidylyltransferase-like
           [Cucumis sativus]
          Length = 297

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 47/83 (56%), Positives = 55/83 (66%), Gaps = 5/83 (6%)
 Frame = -3

Query: 236 CSPSSDSLGG-----KAKLTHXXXXXXXXXXXXXXXAYYGRLRRWRTRVVGIIPARFAST 72
           CS SS S  G     KA + H               +Y GR +++R+RVVGIIPARFAS+
Sbjct: 4   CSSSSSSSSGYLGSAKAWIVHGIVAGIAIGAAFGARSYLGRSKKFRSRVVGIIPARFASS 63

Query: 71  RFEGKPLVQILGKPMIQRTWERA 3
           RFEGKPLV+ILGKPMIQRTWERA
Sbjct: 64  RFEGKPLVEILGKPMIQRTWERA 86


>gb|ACF06611.1| 3-deoxy-manno-octulosonate
           cytidylyltransferase/nucleotidyltransferase [Elaeis
           guineensis]
          Length = 295

 Score = 86.7 bits (213), Expect = 2e-15
 Identities = 47/81 (58%), Positives = 54/81 (66%), Gaps = 3/81 (3%)
 Frame = -3

Query: 236 CSPSSDS---LGGKAKLTHXXXXXXXXXXXXXXXAYYGRLRRWRTRVVGIIPARFASTRF 66
           CSPSS+S     G+A + H               AY+   R+ R+RVVGIIPARFAS+RF
Sbjct: 4   CSPSSESSSATSGRAWIVHALVAGAAVAVGAHAAAYFKWFRKGRSRVVGIIPARFASSRF 63

Query: 65  EGKPLVQILGKPMIQRTWERA 3
           EGKPLV ILGKPMIQRTWERA
Sbjct: 64  EGKPLVHILGKPMIQRTWERA 84


>ref|XP_002894417.1| cytidylyltransferase family [Arabidopsis lyrata subsp. lyrata]
           gi|297340259|gb|EFH70676.1| cytidylyltransferase family
           [Arabidopsis lyrata subsp. lyrata]
          Length = 293

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 46/82 (56%), Positives = 54/82 (65%)
 Frame = -3

Query: 248 MAFFCSPSSDSLGGKAKLTHXXXXXXXXXXXXXXXAYYGRLRRWRTRVVGIIPARFASTR 69
           M+   S SS S   K  + H               AY GR R++R+RVVGIIPAR+AS+R
Sbjct: 1   MSVCSSSSSSSSSQKTWIVHGILAGAAIAAAIGASAYLGRSRKFRSRVVGIIPARYASSR 60

Query: 68  FEGKPLVQILGKPMIQRTWERA 3
           FEGKPLVQILGKPMIQRTWER+
Sbjct: 61  FEGKPLVQILGKPMIQRTWERS 82


>ref|XP_002517281.1| cmp-2-keto-3-deoctulosonate (cmp-kdo) cytidyltransferase, putative
           [Ricinus communis] gi|223543544|gb|EEF45074.1|
           cmp-2-keto-3-deoctulosonate (cmp-kdo)
           cytidyltransferase, putative [Ricinus communis]
          Length = 294

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 44/75 (58%), Positives = 52/75 (69%)
 Frame = -3

Query: 227 SSDSLGGKAKLTHXXXXXXXXXXXXXXXAYYGRLRRWRTRVVGIIPARFASTRFEGKPLV 48
           SS S G K+ + H               AY  R R++R+RV+GIIPARFAS+RF+GKPLV
Sbjct: 9   SSSSSGSKSWIVHSIVAGAAIAVGIGARAYLSRSRKFRSRVIGIIPARFASSRFQGKPLV 68

Query: 47  QILGKPMIQRTWERA 3
           QILGKPMIQRTWERA
Sbjct: 69  QILGKPMIQRTWERA 83


>ref|XP_002329094.1| predicted protein [Populus trichocarpa] gi|222869763|gb|EEF06894.1|
           predicted protein [Populus trichocarpa]
          Length = 288

 Score = 84.7 bits (208), Expect = 7e-15
 Identities = 44/75 (58%), Positives = 51/75 (68%)
 Frame = -3

Query: 227 SSDSLGGKAKLTHXXXXXXXXXXXXXXXAYYGRLRRWRTRVVGIIPARFASTRFEGKPLV 48
           SS+S   K  + H               AY GR R++R+RVVGIIPAR+AS+RFEGKPLV
Sbjct: 3   SSESSSSKFWIVHSIVAGAAIAAAIGAGAYLGRYRKFRSRVVGIIPARYASSRFEGKPLV 62

Query: 47  QILGKPMIQRTWERA 3
            ILGKPMIQRTWERA
Sbjct: 63  NILGKPMIQRTWERA 77


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