BLASTX nr result

ID: Dioscorea21_contig00034100 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00034100
         (323 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267766.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   137   7e-31
emb|CBI32069.3| unnamed protein product [Vitis vinifera]              137   7e-31
ref|NP_001048065.1| Os02g0739000 [Oryza sativa Japonica Group] g...   134   8e-30
gb|EEE57776.1| hypothetical protein OsJ_08317 [Oryza sativa Japo...   134   8e-30
ref|XP_003570680.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   132   4e-29

>ref|XP_002267766.1| PREDICTED: DEAD-box ATP-dependent RNA helicase ISE2,
           chloroplastic-like [Vitis vinifera]
          Length = 1174

 Score =  137 bits (346), Expect = 7e-31
 Identities = 71/98 (72%), Positives = 79/98 (80%)
 Frame = -1

Query: 296 SRFEEHKWQRVQRLLSDVREFGEDIIDFAELASIYDFSIDKFQRLAIQAFLRGSSVVVSA 117
           SR +E KWQRV++L ++VREFGE++ID  ELASIYDF IDKFQRLAIQAFLRGSSVVVSA
Sbjct: 119 SRSDEFKWQRVEKLCNEVREFGEELIDVEELASIYDFRIDKFQRLAIQAFLRGSSVVVSA 178

Query: 116 PTSSGKXXXXXXXXXXXXARGRRLLYTTPLKALSNQKF 3
           PTSSGK            +RGRRL YTTPLKALSNQKF
Sbjct: 179 PTSSGKTLIAEAAAVATVSRGRRLFYTTPLKALSNQKF 216


>emb|CBI32069.3| unnamed protein product [Vitis vinifera]
          Length = 1064

 Score =  137 bits (346), Expect = 7e-31
 Identities = 71/98 (72%), Positives = 79/98 (80%)
 Frame = -1

Query: 296 SRFEEHKWQRVQRLLSDVREFGEDIIDFAELASIYDFSIDKFQRLAIQAFLRGSSVVVSA 117
           SR +E KWQRV++L ++VREFGE++ID  ELASIYDF IDKFQRLAIQAFLRGSSVVVSA
Sbjct: 9   SRSDEFKWQRVEKLCNEVREFGEELIDVEELASIYDFRIDKFQRLAIQAFLRGSSVVVSA 68

Query: 116 PTSSGKXXXXXXXXXXXXARGRRLLYTTPLKALSNQKF 3
           PTSSGK            +RGRRL YTTPLKALSNQKF
Sbjct: 69  PTSSGKTLIAEAAAVATVSRGRRLFYTTPLKALSNQKF 106


>ref|NP_001048065.1| Os02g0739000 [Oryza sativa Japonica Group]
           gi|46390556|dbj|BAD16042.1| putative helicase [Oryza
           sativa Japonica Group] gi|113537596|dbj|BAF09979.1|
           Os02g0739000 [Oryza sativa Japonica Group]
           gi|215704690|dbj|BAG94318.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 1179

 Score =  134 bits (337), Expect = 8e-30
 Identities = 72/97 (74%), Positives = 78/97 (80%)
 Frame = -1

Query: 293 RFEEHKWQRVQRLLSDVREFGEDIIDFAELASIYDFSIDKFQRLAIQAFLRGSSVVVSAP 114
           R EE+K QRV +L+++VREFGEDIID+ ELA IYDF IDKFQRLAIQAFLRGSSVVVSAP
Sbjct: 133 RSEEYKSQRVGKLVAEVREFGEDIIDYNELAGIYDFPIDKFQRLAIQAFLRGSSVVVSAP 192

Query: 113 TSSGKXXXXXXXXXXXXARGRRLLYTTPLKALSNQKF 3
           TSSGK            ARGRRL YTTPLKALSNQKF
Sbjct: 193 TSSGKTLIAEAAAVATVARGRRLFYTTPLKALSNQKF 229


>gb|EEE57776.1| hypothetical protein OsJ_08317 [Oryza sativa Japonica Group]
          Length = 1140

 Score =  134 bits (337), Expect = 8e-30
 Identities = 72/97 (74%), Positives = 78/97 (80%)
 Frame = -1

Query: 293 RFEEHKWQRVQRLLSDVREFGEDIIDFAELASIYDFSIDKFQRLAIQAFLRGSSVVVSAP 114
           R EE+K QRV +L+++VREFGEDIID+ ELA IYDF IDKFQRLAIQAFLRGSSVVVSAP
Sbjct: 133 RSEEYKSQRVGKLVAEVREFGEDIIDYNELAGIYDFPIDKFQRLAIQAFLRGSSVVVSAP 192

Query: 113 TSSGKXXXXXXXXXXXXARGRRLLYTTPLKALSNQKF 3
           TSSGK            ARGRRL YTTPLKALSNQKF
Sbjct: 193 TSSGKTLIAEAAAVATVARGRRLFYTTPLKALSNQKF 229


>ref|XP_003570680.1| PREDICTED: DEAD-box ATP-dependent RNA helicase ISE2,
           chloroplastic-like [Brachypodium distachyon]
          Length = 1168

 Score =  132 bits (331), Expect = 4e-29
 Identities = 70/95 (73%), Positives = 77/95 (81%)
 Frame = -1

Query: 287 EEHKWQRVQRLLSDVREFGEDIIDFAELASIYDFSIDKFQRLAIQAFLRGSSVVVSAPTS 108
           EE+K Q+V +L+++VREFGEDIID+ ELA IYDF IDKFQRLAIQAFLRGSSVVVSAPTS
Sbjct: 123 EEYKSQQVAKLVAEVREFGEDIIDYNELAGIYDFPIDKFQRLAIQAFLRGSSVVVSAPTS 182

Query: 107 SGKXXXXXXXXXXXXARGRRLLYTTPLKALSNQKF 3
           SGK            ARGRRL YTTPLKALSNQKF
Sbjct: 183 SGKTLIAEAAAVATVARGRRLFYTTPLKALSNQKF 217


Top