BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00034092
         (294 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI35966.3| unnamed protein product [Vitis vinifera]               94   9e-18
gb|ABD33115.1| SAM (and some other nucleotide) binding motif; Me...    94   1e-17
ref|XP_003605160.1| Pentatricopeptide repeat-containing protein ...    94   1e-17
ref|XP_002519398.1| pentatricopeptide repeat-containing protein,...    93   3e-17
ref|XP_002299231.1| predicted protein [Populus trichocarpa] gi|2...    93   3e-17

>emb|CBI35966.3| unnamed protein product [Vitis vinifera]
          Length = 624

 Score = 94.4 bits (233), Expect = 9e-18
 Identities = 49/95 (51%), Positives = 66/95 (69%)
 Frame = -3

Query: 292 SWNAMICGCSQCGLPEYALELFRGMQALVVRPNGITFIGVLSACSQLGCLPLGLWVHAYV 113
           SWNA+I GC Q GL E A++L+R M+A  V+PN IT + VLSAC+ LG L LG  VH Y+
Sbjct: 296 SWNAIITGCVQGGLLEEAIDLYRHMKAQSVKPNEITLVNVLSACAGLGALELGREVHLYL 355

Query: 112 NRHLDVDESPALYNALVHMYAKCGRLDVALQVFIE 8
            R+  +D +  L  ALV MYAKCG++D A  +F++
Sbjct: 356 GRN-GLDLNVILATALVDMYAKCGKIDDACLIFVK 389



 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 34/89 (38%), Positives = 48/89 (53%)
 Frame = -3

Query: 292 SWNAMICGCSQCGLPEYALELFRGMQALVVRPNGITFIGVLSACSQLGCLPLGLWVHAYV 113
           SWN++I   +  G P+ +L L+  M     +P+  TF  VL ACS LG +  G  +H +V
Sbjct: 60  SWNSLIRAYTVHGSPQNSLFLYLKMLRSSTKPSNFTFPFVLKACSTLGSVLEGEQIHTHV 119

Query: 112 NRHLDVDESPALYNALVHMYAKCGRLDVA 26
            R L       + N+L+ MY KC RLD A
Sbjct: 120 LR-LGFGSDLFVCNSLIDMYCKCFRLDSA 147


>gb|ABD33115.1| SAM (and some other nucleotide) binding motif; Methyltransferase
           small; Tetratricopeptide-like helical [Medicago
           truncatula]
          Length = 971

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 49/95 (51%), Positives = 61/95 (64%), Gaps = 1/95 (1%)
 Frame = -3

Query: 289 WNAMICGCSQCGLPEYALELFRGMQALVVRPNGITFIGVLSACSQLGCLPLGLWVHAYVN 110
           WNA+I GC Q    + AL LF  MQ   + P+ +T +  LSACSQLG L +G+W+H Y+ 
Sbjct: 359 WNAIISGCVQAKQGKEALALFHEMQIRTIEPDKVTMVNCLSACSQLGALDVGIWIHHYIE 418

Query: 109 RH-LDVDESPALYNALVHMYAKCGRLDVALQVFIE 8
           RH L +D   AL  ALV MYAKCG +  ALQVF E
Sbjct: 419 RHKLSID--VALGTALVDMYAKCGNIARALQVFEE 451



 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 41/93 (44%), Positives = 60/93 (64%)
 Frame = -3

Query: 292 SWNAMICGCSQCGLPEYALELFRGMQALVVRPNGITFIGVLSACSQLGCLPLGLWVHAYV 113
           +WN+MI GC + GL   A+++++ M+A  VRPN IT IG++S+CSQ+  L LG   H Y+
Sbjct: 226 TWNSMITGCVKRGLAIEAIKIYKEMEAEKVRPNEITMIGMISSCSQVQDLNLGKEFHCYI 285

Query: 112 NRHLDVDESPALYNALVHMYAKCGRLDVALQVF 14
             H  ++ +  L NAL+ MY KCG L  A  +F
Sbjct: 286 KEH-GLEFTIPLTNALMDMYVKCGELLTARVLF 317


>ref|XP_003605160.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355506215|gb|AES87357.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 1026

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 49/95 (51%), Positives = 61/95 (64%), Gaps = 1/95 (1%)
 Frame = -3

Query: 289 WNAMICGCSQCGLPEYALELFRGMQALVVRPNGITFIGVLSACSQLGCLPLGLWVHAYVN 110
           WNA+I GC Q    + AL LF  MQ   + P+ +T +  LSACSQLG L +G+W+H Y+ 
Sbjct: 359 WNAIISGCVQAKQGKEALALFHEMQIRTIEPDKVTMVNCLSACSQLGALDVGIWIHHYIE 418

Query: 109 RH-LDVDESPALYNALVHMYAKCGRLDVALQVFIE 8
           RH L +D   AL  ALV MYAKCG +  ALQVF E
Sbjct: 419 RHKLSID--VALGTALVDMYAKCGNIARALQVFEE 451



 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 41/93 (44%), Positives = 60/93 (64%)
 Frame = -3

Query: 292 SWNAMICGCSQCGLPEYALELFRGMQALVVRPNGITFIGVLSACSQLGCLPLGLWVHAYV 113
           +WN+MI GC + GL   A+++++ M+A  VRPN IT IG++S+CSQ+  L LG   H Y+
Sbjct: 226 TWNSMITGCVKRGLAIEAIKIYKEMEAEKVRPNEITMIGMISSCSQVQDLNLGKEFHCYI 285

Query: 112 NRHLDVDESPALYNALVHMYAKCGRLDVALQVF 14
             H  ++ +  L NAL+ MY KCG L  A  +F
Sbjct: 286 KEH-GLEFTIPLTNALMDMYVKCGELLTARVLF 317


>ref|XP_002519398.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223541465|gb|EEF43015.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 615

 Score = 92.8 bits (229), Expect = 3e-17
 Identities = 46/94 (48%), Positives = 65/94 (69%), Gaps = 1/94 (1%)
 Frame = -3

Query: 292 SWNAMICGCSQCGLPEYALELFRGMQALVVRPNGITFIGVLSACSQLGCLPLGLWVHAYV 113
           SWN+MI G +  GL + AL +FR MQ + ++P+ +T +GVL++C+ LG L LG WVH+Y+
Sbjct: 306 SWNSMISGLAHQGLFKEALHMFRRMQTMGLKPDSVTLVGVLNSCANLGDLELGKWVHSYI 365

Query: 112 NR-HLDVDESPALYNALVHMYAKCGRLDVALQVF 14
           ++ H+  D   A  NALV MYAKCG +D A  VF
Sbjct: 366 DKNHMKADGYVA--NALVDMYAKCGSIDQAFMVF 397



 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 40/94 (42%), Positives = 52/94 (55%), Gaps = 1/94 (1%)
 Frame = -3

Query: 292 SWNAMICGCSQCGLPEYALELFRGMQALVVRPNGITFIGVLSACSQLGCLPLGLWVHAYV 113
           SW  +I   S+ G P  A+  F  M     R   +T + VLSACSQLG   LG  + AY+
Sbjct: 206 SWTTLIQAYSKMGYPSEAIAAFFRMNCTADR---MTLVVVLSACSQLGDFTLGKKILAYM 262

Query: 112 NRHL-DVDESPALYNALVHMYAKCGRLDVALQVF 14
           + HL DV     L NAL+ MY KCG+  +A Q+F
Sbjct: 263 DHHLFDVHSDVFLGNALLDMYLKCGQPHLARQLF 296


>ref|XP_002299231.1| predicted protein [Populus trichocarpa] gi|222846489|gb|EEE84036.1|
           predicted protein [Populus trichocarpa]
          Length = 668

 Score = 92.8 bits (229), Expect = 3e-17
 Identities = 48/95 (50%), Positives = 61/95 (64%)
 Frame = -3

Query: 292 SWNAMICGCSQCGLPEYALELFRGMQALVVRPNGITFIGVLSACSQLGCLPLGLWVHAYV 113
           +WNAMI  C Q  L   ALELFR MQ   ++P+ +T +  LSACSQLG L  G+W H Y+
Sbjct: 354 AWNAMIGSCVQANLSFEALELFREMQWSNMKPDKVTMLHCLSACSQLGALDTGMWTHNYI 413

Query: 112 NRHLDVDESPALYNALVHMYAKCGRLDVALQVFIE 8
            +H ++    AL  AL+ MYAKCG +  ALQVF E
Sbjct: 414 KKH-NLSLDVALGTALIDMYAKCGNMTKALQVFNE 447



 Score = 64.7 bits (156), Expect = 8e-09
 Identities = 35/93 (37%), Positives = 55/93 (59%)
 Frame = -3

Query: 292 SWNAMICGCSQCGLPEYALELFRGMQALVVRPNGITFIGVLSACSQLGCLPLGLWVHAYV 113
           SWN++I G  +   P  A+ +++ M    V+P+ +T IGV+SAC+QL  L LG  +H Y+
Sbjct: 222 SWNSLINGYVRRRQPREAMGIYQQMITEHVKPDEVTMIGVVSACAQLESLKLGREIHRYI 281

Query: 112 NRHLDVDESPALYNALVHMYAKCGRLDVALQVF 14
                ++   +L NAL+ MY KCG L+    +F
Sbjct: 282 EES-GLNLKISLVNALMDMYVKCGDLEAGKVLF 313