BLASTX nr result

ID: Dioscorea21_contig00034077 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00034077
         (307 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACY01936.1| hypothetical protein [Beta vulgaris]                    90   2e-16
gb|AAG60117.1|AC073555_1 copia-type polyprotein, putative [Arabi...    87   1e-15
gb|AAF16534.1|AC013482_8 T26F17.17 [Arabidopsis thaliana]              87   1e-15
gb|AAG50698.1|AC079604_5 copia-type polyprotein, putative [Arabi...    87   1e-15
emb|CAA69271.1| lectin receptor kinase [Arabidopsis thaliana]          87   1e-15

>gb|ACY01936.1| hypothetical protein [Beta vulgaris]
          Length = 252

 Score = 89.7 bits (221), Expect = 2e-16
 Identities = 40/93 (43%), Positives = 67/93 (72%)
 Frame = +2

Query: 20  RDNRKQNARALCLIQQSLDSPNLDRVTDAASVHEAWDTLRKQCQGTSKVLSVRIQALRQT 199
           R+NRK++A+ALC IQ ++D     R++ A +  +AW+ ++ + +G  KV+SV++Q LR  
Sbjct: 61  RENRKKDAKALCFIQSAVDDDIFPRISTAKTSKDAWEIIKHEYRGDKKVISVKLQFLRSE 120

Query: 200 FETLQMGDEEGIQEYISRVLVILNQIKALGHKV 298
           FE+LQM D+E IQ Y+S+V  I+NQ+K+ G ++
Sbjct: 121 FESLQMKDKEPIQGYLSKVSAIINQMKSYGEEI 153


>gb|AAG60117.1|AC073555_1 copia-type polyprotein, putative [Arabidopsis thaliana]
          Length = 1352

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 42/93 (45%), Positives = 59/93 (63%)
 Frame = +2

Query: 20  RDNRKQNARALCLIQQSLDSPNLDRVTDAASVHEAWDTLRKQCQGTSKVLSVRIQALRQT 199
           RD+RK++ +ALCLI Q LD    ++V +A S  EAW+ LR   +G  +V  VR+Q LR  
Sbjct: 60  RDSRKRDKKALCLIYQGLDEDTFEKVVEATSAKEAWEKLRTSYKGADQVKKVRLQTLRGE 119

Query: 200 FETLQMGDEEGIQEYISRVLVILNQIKALGHKV 298
           FE LQM + E + +Y SRVL + N +K  G K+
Sbjct: 120 FEALQMKEGELVSDYFSRVLTVTNNLKRNGEKL 152


>gb|AAF16534.1|AC013482_8 T26F17.17 [Arabidopsis thaliana]
          Length = 1291

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 42/93 (45%), Positives = 59/93 (63%)
 Frame = +2

Query: 20  RDNRKQNARALCLIQQSLDSPNLDRVTDAASVHEAWDTLRKQCQGTSKVLSVRIQALRQT 199
           RD+RK++ +ALCLI Q LD    ++V +A S  EAW+ LR   +G  +V  VR+Q LR  
Sbjct: 60  RDSRKRDKKALCLIYQGLDEDTFEKVVEATSAKEAWEKLRTSYKGVDQVKKVRLQTLRGE 119

Query: 200 FETLQMGDEEGIQEYISRVLVILNQIKALGHKV 298
           FE LQM + E + +Y SRVL + N +K  G K+
Sbjct: 120 FEALQMKEGELVSDYFSRVLTVTNNLKRNGEKL 152


>gb|AAG50698.1|AC079604_5 copia-type polyprotein, putative [Arabidopsis thaliana]
           gi|12321387|gb|AAG50765.1|AC079131_10 copia-type
           polyprotein, putative [Arabidopsis thaliana]
          Length = 1320

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 42/93 (45%), Positives = 59/93 (63%)
 Frame = +2

Query: 20  RDNRKQNARALCLIQQSLDSPNLDRVTDAASVHEAWDTLRKQCQGTSKVLSVRIQALRQT 199
           RD+RK++ +ALCLI Q LD    ++V +A S  EAW+ LR   +G  +V  VR+Q LR  
Sbjct: 60  RDSRKRDKKALCLIYQGLDEDTFEKVVEATSAKEAWEKLRTSYKGADQVKKVRLQTLRGE 119

Query: 200 FETLQMGDEEGIQEYISRVLVILNQIKALGHKV 298
           FE LQM + E + +Y SRVL + N +K  G K+
Sbjct: 120 FEALQMKEGELVSDYFSRVLTVTNNLKRNGEKL 152


>emb|CAA69271.1| lectin receptor kinase [Arabidopsis thaliana]
          Length = 544

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 42/93 (45%), Positives = 59/93 (63%)
 Frame = +2

Query: 20  RDNRKQNARALCLIQQSLDSPNLDRVTDAASVHEAWDTLRKQCQGTSKVLSVRIQALRQT 199
           RD+RK++ +ALCLI Q LD    ++V +A S  EAW+ LR   +G  +V  VR+Q LR  
Sbjct: 76  RDSRKRDKKALCLIYQGLDEDTFEKVVEATSAKEAWEKLRTSYKGADQVKKVRLQTLRGE 135

Query: 200 FETLQMGDEEGIQEYISRVLVILNQIKALGHKV 298
           FE LQM + E + +Y SRVL + N +K  G K+
Sbjct: 136 FEALQMKEGELVSDYFSRVLTVTNNLKRNGEKL 168


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