BLASTX nr result

ID: Dioscorea21_contig00034066 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00034066
         (384 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAL79340.1|AC099402_4 Putative 22 kDa kafirin cluster; Ty3-Gy...    97   2e-18
ref|NP_001176105.1| Os10g0357350 [Oryza sativa Japonica Group] g...    97   2e-18
gb|ADN33767.1| gag protease polyprotein [Cucumis melo subsp. melo]     92   4e-17
gb|AAO45751.1| gag-protease polyprotein [Cucumis melo subsp. melo]     92   4e-17
emb|CAN62233.1| hypothetical protein VITISV_010121 [Vitis vinifera]    89   5e-16

>gb|AAL79340.1|AC099402_4 Putative 22 kDa kafirin cluster; Ty3-Gypsy type [Oryza sativa]
           gi|21327374|gb|AAM48279.1|AC122148_32 Putative 22 kDa
           kafirin cluster; Ty3-Gypsy type [Oryza sativa Japonica
           Group] gi|31431495|gb|AAP53268.1| retrotransposon
           protein, putative, Ty3-gypsy subclass [Oryza sativa
           Japonica Group]
          Length = 1230

 Score = 96.7 bits (239), Expect = 2e-18
 Identities = 47/119 (39%), Positives = 71/119 (59%)
 Frame = -2

Query: 362 MRSQRRQPTSAGGRDLLSEFERHAPPPFTGTTDPTVAGYWISQIERTFRVMQSPEEDKVR 183
           M    R   S   R+ L EF++  PP F+GT +P  A  WI  +E++F  M   +++K+ 
Sbjct: 55  MEILERITKSDANRNGLGEFQKLKPPTFSGTANPLEAEEWIVAMEKSFEAMGCTDKEKII 114

Query: 182 LASFMLRDSATQWFENELRLKGESSFRTWKQFKEAFHAKYFPRSRRAQMERQFLSLKQG 6
            A++ML+ SA +W++   +   E  F TW+ FKEAF+ KYFP S +   E++FL LKQG
Sbjct: 115 YATYMLQSSAFEWWDAHKKSYSERIFITWELFKEAFYKKYFPESVKRMKEKEFLELKQG 173


>ref|NP_001176105.1| Os10g0357350 [Oryza sativa Japonica Group]
           gi|255679330|dbj|BAH94833.1| Os10g0357350 [Oryza sativa
           Japonica Group]
          Length = 443

 Score = 96.7 bits (239), Expect = 2e-18
 Identities = 47/119 (39%), Positives = 71/119 (59%)
 Frame = -2

Query: 362 MRSQRRQPTSAGGRDLLSEFERHAPPPFTGTTDPTVAGYWISQIERTFRVMQSPEEDKVR 183
           M    R   S   R+ L EF++  PP F+GT +P  A  WI  +E++F  M   +++K+ 
Sbjct: 143 MEILERITKSDANRNGLGEFQKLKPPTFSGTANPLEAEEWIVAMEKSFEAMGCTDKEKII 202

Query: 182 LASFMLRDSATQWFENELRLKGESSFRTWKQFKEAFHAKYFPRSRRAQMERQFLSLKQG 6
            A++ML+ SA +W++   +   E  F TW+ FKEAF+ KYFP S +   E++FL LKQG
Sbjct: 203 YATYMLQSSAFEWWDAHKKSYSERIFITWELFKEAFYKKYFPESVKRMKEKEFLELKQG 261


>gb|ADN33767.1| gag protease polyprotein [Cucumis melo subsp. melo]
          Length = 871

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 48/105 (45%), Positives = 67/105 (63%), Gaps = 2/105 (1%)
 Frame = -2

Query: 314 LSEFERHAPPPFTGTT-DPTVAGYWISQIERTFRVMQSPEEDKVRLASFMLRDSATQWFE 138
           L +F ++ P  F G+  DPT A  W+S +E  FR M+ PE+ KV+ A FML D  T W+E
Sbjct: 332 LRDFRKYNPTTFDGSLEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWE 391

Query: 137 -NELRLKGESSFRTWKQFKEAFHAKYFPRSRRAQMERQFLSLKQG 6
             E  L G+ S  TW+QFKE+F+AK+F  S R    ++FL+L+QG
Sbjct: 392 TTERMLGGDVSQITWQQFKESFYAKFFSASLRDAKRQEFLNLEQG 436


>gb|AAO45751.1| gag-protease polyprotein [Cucumis melo subsp. melo]
          Length = 429

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 48/105 (45%), Positives = 67/105 (63%), Gaps = 2/105 (1%)
 Frame = -2

Query: 314 LSEFERHAPPPFTGTT-DPTVAGYWISQIERTFRVMQSPEEDKVRLASFMLRDSATQWFE 138
           L +F ++ P  F G+  DPT A  W+S +E  FR M+ PE+ KV+ A FML D  T W+E
Sbjct: 60  LRDFRKYNPTTFDGSLEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWE 119

Query: 137 -NELRLKGESSFRTWKQFKEAFHAKYFPRSRRAQMERQFLSLKQG 6
             E  L G+ S  TW+QFKE+F+AK+F  S R    ++FL+L+QG
Sbjct: 120 TTERMLGGDVSQITWQQFKESFYAKFFSASLRDAKRQEFLNLEQG 164


>emb|CAN62233.1| hypothetical protein VITISV_010121 [Vitis vinifera]
          Length = 1797

 Score = 88.6 bits (218), Expect = 5e-16
 Identities = 47/113 (41%), Positives = 66/113 (58%)
 Frame = -2

Query: 344 QPTSAGGRDLLSEFERHAPPPFTGTTDPTVAGYWISQIERTFRVMQSPEEDKVRLASFML 165
           Q +S+ G     +F++  PP F+G TDPT A  WI ++E+ F V+   EE K   A+FML
Sbjct: 544 QSSSSRGSSF-DDFKKLGPPYFSGATDPTEAEAWILKMEKFFGVIDCSEEQKASYAAFML 602

Query: 164 RDSATQWFENELRLKGESSFRTWKQFKEAFHAKYFPRSRRAQMERQFLSLKQG 6
              A  W+    RL  +    TW+QF+EAF+ KYFP S R Q   +F+ L+QG
Sbjct: 603 DKEAYHWWRMTRRLLEDQGPITWRQFREAFYKKYFPDSVRWQKVGEFIRLEQG 655


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