BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00034054
         (262 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI29513.3| unnamed protein product [Vitis vinifera]               74   1e-11
ref|XP_002510803.1| DNA mismatch repair protein MSH3, putative [...    74   1e-11
ref|XP_002322465.1| predicted protein [Populus trichocarpa] gi|2...    74   1e-11
ref|XP_003556101.1| PREDICTED: DNA mismatch repair protein Msh3-...    74   1e-11
ref|XP_002263286.2| PREDICTED: DNA mismatch repair protein Msh3-...    73   2e-11

>emb|CBI29513.3| unnamed protein product [Vitis vinifera]
          Length = 470

 Score = 74.3 bits (181), Expect = 1e-11
 Identities = 39/73 (53%), Positives = 47/73 (64%)
 Frame = +2

Query: 44  TLAPKRPRLIPNSNPSLHQRFLNKLFXXXXXXXXXXXXXXGTTKYTPLELQVLDLKSKHP 223
           T  PK P++    +PSLHQ+FL KL                TTKYTPLE QV+DLK K+P
Sbjct: 73  TKPPKAPKISHPIDPSLHQKFLQKLLEPSSSTPTKLPLP--TTKYTPLEQQVVDLKQKYP 130

Query: 224 DVILMVEVGYKYR 262
           DV+LMVEVGY+YR
Sbjct: 131 DVLLMVEVGYRYR 143


>ref|XP_002510803.1| DNA mismatch repair protein MSH3, putative [Ricinus communis]
           gi|223549918|gb|EEF51405.1| DNA mismatch repair protein
           MSH3, putative [Ricinus communis]
          Length = 1100

 Score = 74.3 bits (181), Expect = 1e-11
 Identities = 41/77 (53%), Positives = 49/77 (63%), Gaps = 4/77 (5%)
 Frame = +2

Query: 44  TLAPKRPRL----IPNSNPSLHQRFLNKLFXXXXXXXXXXXXXXGTTKYTPLELQVLDLK 211
           T  PK+P+L    IP  + SLHQ+FLNK F                 KYTPLE QVLDLK
Sbjct: 63  TSTPKKPKLSDNDIPTPSSSLHQKFLNK-FLEPSSPEIPQPPSSYPRKYTPLEKQVLDLK 121

Query: 212 SKHPDVILMVEVGYKYR 262
           +K+PDV+LM+EVGYKYR
Sbjct: 122 TKYPDVLLMIEVGYKYR 138


>ref|XP_002322465.1| predicted protein [Populus trichocarpa] gi|222869461|gb|EEF06592.1|
           predicted protein [Populus trichocarpa]
          Length = 1092

 Score = 74.3 bits (181), Expect = 1e-11
 Identities = 36/76 (47%), Positives = 50/76 (65%), Gaps = 3/76 (3%)
 Frame = +2

Query: 44  TLAPKRPRLIPNSN---PSLHQRFLNKLFXXXXXXXXXXXXXXGTTKYTPLELQVLDLKS 214
           T  PKRP+L P++    PSLH++F++KL                T K+TPLE QV+DLK 
Sbjct: 63  TSTPKRPKLSPHTQNPLPSLHKKFVDKLLEPQTPQTPQPQNTQNTQKFTPLEQQVVDLKQ 122

Query: 215 KHPDVILMVEVGYKYR 262
           ++PDV+LM+EVGYK+R
Sbjct: 123 RYPDVLLMIEVGYKFR 138


>ref|XP_003556101.1| PREDICTED: DNA mismatch repair protein Msh3-like [Glycine max]
          Length = 1070

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 42/77 (54%), Positives = 48/77 (62%), Gaps = 4/77 (5%)
 Frame = +2

Query: 44  TLAPKRPRLIPNSN----PSLHQRFLNKLFXXXXXXXXXXXXXXGTTKYTPLELQVLDLK 211
           T + K P+L P++     PSLHQRFL KL                 T YTPLE QVLDLK
Sbjct: 48  TTSRKHPKLSPHTQNPVPPSLHQRFLQKLLEPSTPQQHPASSSKPPT-YTPLEQQVLDLK 106

Query: 212 SKHPDVILMVEVGYKYR 262
           +KHPDV+LMVEVGYKYR
Sbjct: 107 AKHPDVLLMVEVGYKYR 123


>ref|XP_002263286.2| PREDICTED: DNA mismatch repair protein Msh3-like [Vitis vinifera]
          Length = 1137

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 38/73 (52%), Positives = 47/73 (64%)
 Frame = +2

Query: 44  TLAPKRPRLIPNSNPSLHQRFLNKLFXXXXXXXXXXXXXXGTTKYTPLELQVLDLKSKHP 223
           T  PK P++    +PSLHQ+F+ KL                TTKYTPLE QV+DLK K+P
Sbjct: 71  TKPPKAPKISHPIDPSLHQKFVQKLLEPSSSTPTKLPLP--TTKYTPLEQQVVDLKQKYP 128

Query: 224 DVILMVEVGYKYR 262
           DV+LMVEVGY+YR
Sbjct: 129 DVLLMVEVGYRYR 141