BLASTX nr result

ID: Dioscorea21_contig00034037 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00034037
         (403 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002525071.1| Ribulose-1,5 bisphosphate carboxylase/oxygen...    99   3e-19
ref|XP_002878015.1| SET domain-containing protein [Arabidopsis l...    97   1e-18
ref|XP_003592778.1| Ribulose-1,5 bisphosphate carboxylase/oxygen...    93   3e-17
ref|XP_003592777.1| Ribulose-1,5 bisphosphate carboxylase/oxygen...    93   3e-17
emb|CBI25318.3| unnamed protein product [Vitis vinifera]               91   1e-16

>ref|XP_002525071.1| Ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit
           N-methyltransferase, chloroplast precursor, putative
           [Ricinus communis] gi|223535652|gb|EEF37318.1|
           Ribulose-1,5 bisphosphate carboxylase/oxygenase large
           subunit N-methyltransferase, chloroplast precursor,
           putative [Ricinus communis]
          Length = 456

 Score = 99.4 bits (246), Expect = 3e-19
 Identities = 51/109 (46%), Positives = 73/109 (66%)
 Frame = -1

Query: 403 RLLSATSNDELKAMETEAAENDGRLGRRTLKDMSKEILAHHILLAQLERAVHSHVAAITA 224
           R+L  TS+ +L  +  EAA+ DGRL RR L++ S+EI AH ILL+++ + +  + A+I  
Sbjct: 331 RVLCCTSHQDLNDLVLEAAQTDGRLARRALENSSREIQAHEILLSRINQVIEEYSASIKL 390

Query: 223 LSSAQTYNDHSRFTYRRQMARDVLEGELCVLRSACDWIKNYCLRLLE*T 77
           L S+ + +   RF  RRQMA D+L GEL VL+SA  W+KNYC  LL+ T
Sbjct: 391 LESSTSLSICKRFALRRQMALDLLTGELRVLKSASAWLKNYCTSLLQQT 439


>ref|XP_002878015.1| SET domain-containing protein [Arabidopsis lyrata subsp. lyrata]
           gi|297323853|gb|EFH54274.1| SET domain-containing
           protein [Arabidopsis lyrata subsp. lyrata]
          Length = 473

 Score = 97.4 bits (241), Expect = 1e-18
 Identities = 50/110 (45%), Positives = 67/110 (60%)
 Frame = -1

Query: 403 RLLSATSNDELKAMETEAAENDGRLGRRTLKDMSKEILAHHILLAQLERAVHSHVAAITA 224
           R+L  T   EL  +  EAA+NDGRL R   KD S+E+ AH ILL+ + R +  H A I  
Sbjct: 356 RVLCCTIPQELNDLSKEAAKNDGRLARLPFKDRSRELEAHKILLSHINRLIEDHSACIKE 415

Query: 223 LSSAQTYNDHSRFTYRRQMARDVLEGELCVLRSACDWIKNYCLRLLE*TN 74
           L  ++ Y    RF  RR+MA+D+L GEL VLRSA +W+ +YC  L   T+
Sbjct: 416 LEESKCYFVSQRFAVRRKMAKDLLYGELRVLRSAAEWLNHYCTTLFSVTS 465


>ref|XP_003592778.1| Ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit
           N-methyltransferase [Medicago truncatula]
           gi|355481826|gb|AES63029.1| Ribulose-1,5 bisphosphate
           carboxylase/oxygenase large subunit N-methyltransferase
           [Medicago truncatula]
          Length = 243

 Score = 92.8 bits (229), Expect = 3e-17
 Identities = 48/105 (45%), Positives = 65/105 (61%)
 Frame = -1

Query: 403 RLLSATSNDELKAMETEAAENDGRLGRRTLKDMSKEILAHHILLAQLERAVHSHVAAITA 224
           R+LS T+  EL  +  EAA+ DGRL R  L+D  KEI AH +L +   + +  H A IT+
Sbjct: 138 RVLSCTTLQELNHLVMEAAQTDGRLARHPLQDRIKEIQAHKMLSSLFIQLIGEHNATITS 197

Query: 223 LSSAQTYNDHSRFTYRRQMARDVLEGELCVLRSACDWIKNYCLRL 89
           L S  + +   R   RRQMARD+L GEL +L+SA  W++NYC  L
Sbjct: 198 LDSCDSSSSSERLPVRRQMARDLLHGELHILKSASTWLENYCFSL 242


>ref|XP_003592777.1| Ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit
           N-methyltransferase [Medicago truncatula]
           gi|355481825|gb|AES63028.1| Ribulose-1,5 bisphosphate
           carboxylase/oxygenase large subunit N-methyltransferase
           [Medicago truncatula]
          Length = 451

 Score = 92.8 bits (229), Expect = 3e-17
 Identities = 48/105 (45%), Positives = 65/105 (61%)
 Frame = -1

Query: 403 RLLSATSNDELKAMETEAAENDGRLGRRTLKDMSKEILAHHILLAQLERAVHSHVAAITA 224
           R+LS T+  EL  +  EAA+ DGRL R  L+D  KEI AH +L +   + +  H A IT+
Sbjct: 346 RVLSCTTLQELNHLVMEAAQTDGRLARHPLQDRIKEIQAHKMLSSLFIQLIGEHNATITS 405

Query: 223 LSSAQTYNDHSRFTYRRQMARDVLEGELCVLRSACDWIKNYCLRL 89
           L S  + +   R   RRQMARD+L GEL +L+SA  W++NYC  L
Sbjct: 406 LDSCDSSSSSERLPVRRQMARDLLHGELHILKSASTWLENYCFSL 450


>emb|CBI25318.3| unnamed protein product [Vitis vinifera]
          Length = 487

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 50/119 (42%), Positives = 72/119 (60%)
 Frame = -1

Query: 403 RLLSATSNDELKAMETEAAENDGRLGRRTLKDMSKEILAHHILLAQLERAVHSHVAAITA 224
           R+   TS  EL  +  EAA+NDGRL RR LK  ++EI AH +LL+ + R ++ +  +I +
Sbjct: 362 RIFCCTSPQELSDLAVEAAQNDGRLARRPLKSWNREIQAHQVLLSWITRLINEYNTSIKS 421

Query: 223 LSSAQTYNDHSRFTYRRQMARDVLEGELCVLRSACDWIKNYCLRLLE*TNISCRVDGAE 47
           L  A     +  F  R+QMARD+L GEL VL+SA  W++NYC  L   + +S    G+E
Sbjct: 422 LPLASPL--YETFALRKQMARDLLTGELRVLKSAGAWLENYCATLTTKSYLSDENGGSE 478


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