BLASTX nr result
ID: Dioscorea21_contig00034036
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dioscorea21_contig00034036
(254 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI24229.3| unnamed protein product [Vitis vinifera] 116 2e-24
ref|XP_002275537.1| PREDICTED: pentatricopeptide repeat-containi... 116 2e-24
emb|CAN83391.1| hypothetical protein VITISV_041405 [Vitis vinifera] 116 2e-24
ref|XP_003530713.1| PREDICTED: pentatricopeptide repeat-containi... 109 3e-22
ref|XP_003545819.1| PREDICTED: pentatricopeptide repeat-containi... 107 1e-21
>emb|CBI24229.3| unnamed protein product [Vitis vinifera]
Length = 547
Score = 116 bits (291), Expect = 2e-24
Identities = 51/84 (60%), Positives = 70/84 (83%)
Frame = -1
Query: 254 WNTMIGGYSLKGDTQSCLQLFSRMNRERIRPTSTTISNLLIACSRTSDLRHGKIIHGCLI 75
WN+MI GYSLKGD++SC++LF RM+ E IRPT TT+S++L+ACSR+ +L+ GK IHG +I
Sbjct: 180 WNSMIAGYSLKGDSKSCIELFRRMDEEGIRPTLTTLSSILMACSRSVNLQLGKFIHGYII 239
Query: 74 RNCISFDVFIGSSLIDLYFKCASV 3
RN + D+F+ SSLIDLYFKC ++
Sbjct: 240 RNRVEADIFVNSSLIDLYFKCGNI 263
Score = 57.4 bits (137), Expect = 1e-06
Identities = 25/69 (36%), Positives = 42/69 (60%)
Frame = -1
Query: 218 DTQSCLQLFSRMNRERIRPTSTTISNLLIACSRTSDLRHGKIIHGCLIRNCISFDVFIGS 39
+ + L+LF M +P S T++ ++ +C+R DL GK IH L+R+ + D F+ S
Sbjct: 91 EPEKALELFEEMKVSGFKPDSVTLTTVISSCARLLDLERGKEIHMELVRSGFALDGFVSS 150
Query: 38 SLIDLYFKC 12
+L+D+Y KC
Sbjct: 151 ALVDMYGKC 159
>ref|XP_002275537.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g27110-like [Vitis vinifera]
Length = 694
Score = 116 bits (291), Expect = 2e-24
Identities = 51/84 (60%), Positives = 70/84 (83%)
Frame = -1
Query: 254 WNTMIGGYSLKGDTQSCLQLFSRMNRERIRPTSTTISNLLIACSRTSDLRHGKIIHGCLI 75
WN+MI GYSLKGD++SC++LF RM+ E IRPT TT+S++L+ACSR+ +L+ GK IHG +I
Sbjct: 276 WNSMIAGYSLKGDSKSCIELFRRMDEEGIRPTLTTLSSILMACSRSVNLQLGKFIHGYII 335
Query: 74 RNCISFDVFIGSSLIDLYFKCASV 3
RN + D+F+ SSLIDLYFKC ++
Sbjct: 336 RNRVEADIFVNSSLIDLYFKCGNI 359
Score = 67.0 bits (162), Expect = 2e-09
Identities = 30/81 (37%), Positives = 47/81 (58%)
Frame = -1
Query: 254 WNTMIGGYSLKGDTQSCLQLFSRMNRERIRPTSTTISNLLIACSRTSDLRHGKIIHGCLI 75
WN +I Y G + L+LF M +P S T++ ++ +C+R DL GK IH L+
Sbjct: 175 WNNVISCYYQDGQPEKALELFEEMKVSGFKPDSVTLTTVISSCARLLDLERGKEIHMELV 234
Query: 74 RNCISFDVFIGSSLIDLYFKC 12
R+ + D F+ S+L+D+Y KC
Sbjct: 235 RSGFALDGFVSSALVDMYGKC 255
Score = 61.2 bits (147), Expect = 8e-08
Identities = 28/84 (33%), Positives = 48/84 (57%)
Frame = -1
Query: 254 WNTMIGGYSLKGDTQSCLQLFSRMNRERIRPTSTTISNLLIACSRTSDLRHGKIIHGCLI 75
WN MI GY G L +F+ M + ++P + T +++L ACS+ + L GK IH +I
Sbjct: 377 WNVMISGYVKVGSYLEALVIFTDMRKAGVKPDAITFTSVLPACSQLAVLEKGKEIHNFII 436
Query: 74 RNCISFDVFIGSSLIDLYFKCASV 3
+ + + + +L+D+Y KC +V
Sbjct: 437 ESKLEINEVVMGALLDMYAKCGAV 460
>emb|CAN83391.1| hypothetical protein VITISV_041405 [Vitis vinifera]
Length = 886
Score = 116 bits (291), Expect = 2e-24
Identities = 51/84 (60%), Positives = 70/84 (83%)
Frame = -1
Query: 254 WNTMIGGYSLKGDTQSCLQLFSRMNRERIRPTSTTISNLLIACSRTSDLRHGKIIHGCLI 75
WN+MI GYSLKGD++SC++LF RM+ E IRPT TT+S++L+ACSR+ +L+ GK IHG +I
Sbjct: 468 WNSMIAGYSLKGDSKSCIELFRRMDEEGIRPTLTTLSSILMACSRSVNLQLGKFIHGYII 527
Query: 74 RNCISFDVFIGSSLIDLYFKCASV 3
RN + D+F+ SSLIDLYFKC ++
Sbjct: 528 RNRVEADIFVNSSLIDLYFKCGNI 551
Score = 67.0 bits (162), Expect = 2e-09
Identities = 30/81 (37%), Positives = 47/81 (58%)
Frame = -1
Query: 254 WNTMIGGYSLKGDTQSCLQLFSRMNRERIRPTSTTISNLLIACSRTSDLRHGKIIHGCLI 75
WN +I Y G + L+LF M +P S T++ ++ +C+R DL GK IH L+
Sbjct: 367 WNNVISCYYQDGQPEKALELFEEMKVSGFKPDSVTLTTVISSCARLLDLERGKEIHMELV 426
Query: 74 RNCISFDVFIGSSLIDLYFKC 12
R+ + D F+ S+L+D+Y KC
Sbjct: 427 RSGFALDGFVSSALVDMYGKC 447
Score = 61.2 bits (147), Expect = 8e-08
Identities = 28/84 (33%), Positives = 48/84 (57%)
Frame = -1
Query: 254 WNTMIGGYSLKGDTQSCLQLFSRMNRERIRPTSTTISNLLIACSRTSDLRHGKIIHGCLI 75
WN MI GY G L +F+ M + ++P + T +++L ACS+ + L GK IH +I
Sbjct: 569 WNVMISGYVKVGSYLEALVIFTDMRKAGVKPDAITFTSVLPACSQLAVLEKGKEIHNFII 628
Query: 74 RNCISFDVFIGSSLIDLYFKCASV 3
+ + + + +L+D+Y KC +V
Sbjct: 629 ESKLEINEVVMGALLDMYAKCGAV 652
>ref|XP_003530713.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g27110-like [Glycine max]
Length = 705
Score = 109 bits (272), Expect = 3e-22
Identities = 50/84 (59%), Positives = 63/84 (75%)
Frame = -1
Query: 254 WNTMIGGYSLKGDTQSCLQLFSRMNRERIRPTSTTISNLLIACSRTSDLRHGKIIHGCLI 75
WN+MI GY LKGD+ SC+QLF RM E ++PT TT+S+L++ CSR++ L GK +HG I
Sbjct: 276 WNSMISGYGLKGDSISCIQLFKRMYNEGVKPTLTTLSSLIMVCSRSARLLEGKFVHGYTI 335
Query: 74 RNCISFDVFIGSSLIDLYFKCASV 3
RN I DVFI SSL+DLYFKC V
Sbjct: 336 RNRIQSDVFINSSLMDLYFKCGKV 359
Score = 63.9 bits (154), Expect = 1e-08
Identities = 32/81 (39%), Positives = 44/81 (54%)
Frame = -1
Query: 254 WNTMIGGYSLKGDTQSCLQLFSRMNRERIRPTSTTISNLLIACSRTSDLRHGKIIHGCLI 75
WNT+I Y G+ + L+ F M R P S TI+ + +C+R DL G IH LI
Sbjct: 175 WNTVISCYYQSGNFKEALEYFGLMRRFGFEPNSVTITTAISSCARLLDLNRGMEIHEELI 234
Query: 74 RNCISFDVFIGSSLIDLYFKC 12
+ D FI S+L+D+Y KC
Sbjct: 235 NSGFLLDSFISSALVDMYGKC 255
Score = 63.2 bits (152), Expect = 2e-08
Identities = 29/84 (34%), Positives = 47/84 (55%)
Frame = -1
Query: 254 WNTMIGGYSLKGDTQSCLQLFSRMNRERIRPTSTTISNLLIACSRTSDLRHGKIIHGCLI 75
WN MI GY +G L LFS M + + P + T +++L ACS+ + L G+ IH +I
Sbjct: 377 WNVMISGYVAEGKLFEALGLFSEMRKSYVEPDAITFTSVLTACSQLAALEKGEEIHNLII 436
Query: 74 RNCISFDVFIGSSLIDLYFKCASV 3
+ + + +L+D+Y KC +V
Sbjct: 437 EKKLDNNEVVMGALLDMYAKCGAV 460
Score = 55.5 bits (132), Expect = 5e-06
Identities = 27/82 (32%), Positives = 46/82 (56%), Gaps = 1/82 (1%)
Frame = -1
Query: 254 WNTMIGGYSLKGDTQSCLQLFSRM-NRERIRPTSTTISNLLIACSRTSDLRHGKIIHGCL 78
WN ++ GY+ L+LF ++ + ++P S T ++L AC GK+IH CL
Sbjct: 73 WNGLMAGYTKNYMYVEALELFEKLLHYPYLKPDSYTYPSVLKACGGLYKYVLGKMIHTCL 132
Query: 77 IRNCISFDVFIGSSLIDLYFKC 12
++ + D+ +GSSL+ +Y KC
Sbjct: 133 VKTGLMMDIVVGSSLVGMYAKC 154
>ref|XP_003545819.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g27110-like [Glycine max]
Length = 705
Score = 107 bits (267), Expect = 1e-21
Identities = 49/84 (58%), Positives = 62/84 (73%)
Frame = -1
Query: 254 WNTMIGGYSLKGDTQSCLQLFSRMNRERIRPTSTTISNLLIACSRTSDLRHGKIIHGCLI 75
WN+MI GY LKGD SC+QLF RM E ++PT TT+S+L++ CSR++ L GK +HG I
Sbjct: 276 WNSMISGYGLKGDIISCIQLFKRMYNEGVKPTLTTLSSLIMVCSRSARLLEGKFVHGYTI 335
Query: 74 RNCISFDVFIGSSLIDLYFKCASV 3
RN I DVF+ SSL+DLYFKC V
Sbjct: 336 RNRIQPDVFVNSSLMDLYFKCGKV 359
Score = 63.9 bits (154), Expect = 1e-08
Identities = 32/81 (39%), Positives = 44/81 (54%)
Frame = -1
Query: 254 WNTMIGGYSLKGDTQSCLQLFSRMNRERIRPTSTTISNLLIACSRTSDLRHGKIIHGCLI 75
WNT+I Y G+ + L+ F M R P S TI+ + +C+R DL G IH LI
Sbjct: 175 WNTVISCYYQSGNFKDALEYFGLMRRFGFEPNSVTITTAISSCARLLDLNRGMEIHEELI 234
Query: 74 RNCISFDVFIGSSLIDLYFKC 12
+ D FI S+L+D+Y KC
Sbjct: 235 NSGFLLDSFISSALVDMYGKC 255
Score = 61.6 bits (148), Expect = 6e-08
Identities = 29/84 (34%), Positives = 46/84 (54%)
Frame = -1
Query: 254 WNTMIGGYSLKGDTQSCLQLFSRMNRERIRPTSTTISNLLIACSRTSDLRHGKIIHGCLI 75
WN MI GY +G L LFS M + + + T +++L ACS+ + L GK IH +I
Sbjct: 377 WNVMISGYVAEGKLFEALGLFSEMRKSYVESDAITFTSVLTACSQLAALEKGKEIHNLII 436
Query: 74 RNCISFDVFIGSSLIDLYFKCASV 3
+ + + +L+D+Y KC +V
Sbjct: 437 EKKLDNNEVVMGALLDMYAKCGAV 460