BLASTX nr result
ID: Dioscorea21_contig00034013
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Dioscorea21_contig00034013 (412 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002265789.1| PREDICTED: DNA polymerase alpha subunit B [V... 207 9e-52 ref|XP_002438164.1| hypothetical protein SORBIDRAFT_10g009040 [S... 202 2e-50 ref|XP_003578733.1| PREDICTED: DNA polymerase alpha subunit B-li... 202 3e-50 dbj|BAK05466.1| predicted protein [Hordeum vulgare subsp. vulgare] 200 1e-49 gb|EEC69071.1| hypothetical protein OsI_37935 [Oryza sativa Indi... 200 1e-49 >ref|XP_002265789.1| PREDICTED: DNA polymerase alpha subunit B [Vitis vinifera] gi|297738371|emb|CBI27572.3| unnamed protein product [Vitis vinifera] Length = 623 Score = 207 bits (526), Expect = 9e-52 Identities = 98/130 (75%), Positives = 115/130 (88%) Frame = -1 Query: 397 LSLVAAAGPFTTTDNLLFEPLTELLSYASRKQSQLLLLMGPFLDSEHPEIKKGTVDQSFD 218 LSL+ AAGPFTTTDNLLFEPLTELL+YA RK QLL+L+GPF+DSEHPEI+KGTVD+SFD Sbjct: 358 LSLMVAAGPFTTTDNLLFEPLTELLAYARRKMPQLLILLGPFVDSEHPEIRKGTVDRSFD 417 Query: 217 EIFHIEVLRKLQDYIEFMGPATRVILVPSIRDANHGFVFPQPAFDIHLPDNIRHQIICLS 38 EIFH+E+LR+LQDY+E+MG A RVILVPSIRDANH FVFPQPAF IH PD ++HQI L+ Sbjct: 418 EIFHLEILRRLQDYVEYMGSAARVILVPSIRDANHDFVFPQPAFSIHPPD-LKHQITSLT 476 Query: 37 NPSLVSANEI 8 NP + ANE+ Sbjct: 477 NPGMFDANEV 486 >ref|XP_002438164.1| hypothetical protein SORBIDRAFT_10g009040 [Sorghum bicolor] gi|241916387|gb|EER89531.1| hypothetical protein SORBIDRAFT_10g009040 [Sorghum bicolor] Length = 626 Score = 202 bits (515), Expect = 2e-50 Identities = 93/133 (69%), Positives = 115/133 (86%) Frame = -1 Query: 406 SKRLSLVAAAGPFTTTDNLLFEPLTELLSYASRKQSQLLLLMGPFLDSEHPEIKKGTVDQ 227 S+ LS V AAGP+TTTDNLLFEPL ELLSYA RKQ QLL+LMGPF+DS+HP+IKKGTVDQ Sbjct: 359 SRALSSVIAAGPYTTTDNLLFEPLQELLSYACRKQPQLLILMGPFIDSDHPDIKKGTVDQ 418 Query: 226 SFDEIFHIEVLRKLQDYIEFMGPATRVILVPSIRDANHGFVFPQPAFDIHLPDNIRHQII 47 SF +IFH E+LRK+QD+ +++G RVIL+PS+RDA+H FVFPQPAFD++ P++I HQI Sbjct: 419 SFHDIFHFEILRKIQDFTQYLGNTVRVILIPSVRDAHHDFVFPQPAFDLNFPEDITHQIT 478 Query: 46 CLSNPSLVSANEI 8 CL+NP L S+NEI Sbjct: 479 CLANPCLFSSNEI 491 >ref|XP_003578733.1| PREDICTED: DNA polymerase alpha subunit B-like [Brachypodium distachyon] Length = 625 Score = 202 bits (513), Expect = 3e-50 Identities = 94/133 (70%), Positives = 117/133 (87%) Frame = -1 Query: 406 SKRLSLVAAAGPFTTTDNLLFEPLTELLSYASRKQSQLLLLMGPFLDSEHPEIKKGTVDQ 227 S+ LS V AAGP+TTTDNLLFEPL ELLSYA RKQ QLL+LMGPF+DS+HP+IK+GTVDQ Sbjct: 358 SRVLSSVIAAGPYTTTDNLLFEPLQELLSYACRKQPQLLILMGPFIDSDHPDIKRGTVDQ 417 Query: 226 SFDEIFHIEVLRKLQDYIEFMGPATRVILVPSIRDANHGFVFPQPAFDIHLPDNIRHQII 47 SF +IFH E+LRKLQD+ +++G + RVILVPS+RDA+H VFPQPAFD++LP++I HQI Sbjct: 418 SFHDIFHFEILRKLQDFTQYLGHSVRVILVPSVRDAHHDTVFPQPAFDLNLPEDITHQIT 477 Query: 46 CLSNPSLVSANEI 8 CL+NPS+ S+NEI Sbjct: 478 CLANPSIFSSNEI 490 >dbj|BAK05466.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 625 Score = 200 bits (508), Expect = 1e-49 Identities = 97/133 (72%), Positives = 113/133 (84%) Frame = -1 Query: 406 SKRLSLVAAAGPFTTTDNLLFEPLTELLSYASRKQSQLLLLMGPFLDSEHPEIKKGTVDQ 227 S+ LS V AAGPFTTTDNLLFEPL ELLSYA RKQ QLL+LMGPF+DS+HPEIKKGT DQ Sbjct: 358 SRVLSSVIAAGPFTTTDNLLFEPLQELLSYACRKQPQLLILMGPFIDSDHPEIKKGTSDQ 417 Query: 226 SFDEIFHIEVLRKLQDYIEFMGPATRVILVPSIRDANHGFVFPQPAFDIHLPDNIRHQII 47 SF +IF E+LRKLQD+ +++G RVILVPS+RDA+H VFPQPAFD+HLP++I QI Sbjct: 418 SFHDIFRFEILRKLQDFTQYLGYNVRVILVPSVRDAHHDTVFPQPAFDLHLPEDITQQIT 477 Query: 46 CLSNPSLVSANEI 8 CLSNPSL S+NEI Sbjct: 478 CLSNPSLFSSNEI 490 >gb|EEC69071.1| hypothetical protein OsI_37935 [Oryza sativa Indica Group] Length = 625 Score = 200 bits (508), Expect = 1e-49 Identities = 94/133 (70%), Positives = 115/133 (86%) Frame = -1 Query: 406 SKRLSLVAAAGPFTTTDNLLFEPLTELLSYASRKQSQLLLLMGPFLDSEHPEIKKGTVDQ 227 S+ LS V AAGP+TT+DNLLFEPL EL+SYASRKQ QLL+LMGPF+DS+HPEIKKG VDQ Sbjct: 358 SRVLSSVIAAGPYTTSDNLLFEPLQELISYASRKQPQLLILMGPFIDSDHPEIKKGAVDQ 417 Query: 226 SFDEIFHIEVLRKLQDYIEFMGPATRVILVPSIRDANHGFVFPQPAFDIHLPDNIRHQII 47 SF +IF E+LRKLQD+ +++G RVIL+PS+RDA+H FVFPQPAFD++LP++I HQI Sbjct: 418 SFQDIFLFEILRKLQDFTQYLGHNVRVILIPSVRDAHHDFVFPQPAFDLNLPEDITHQIT 477 Query: 46 CLSNPSLVSANEI 8 CL+NPSL S NEI Sbjct: 478 CLANPSLFSCNEI 490