BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00033489
         (516 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284545.2| PREDICTED: pentatricopeptide repeat-containi...   264   5e-69
ref|XP_003546945.1| PREDICTED: putative pentatricopeptide repeat...   256   2e-66
ref|XP_004154387.1| PREDICTED: pentatricopeptide repeat-containi...   252   3e-65
emb|CBI36131.3| unnamed protein product [Vitis vinifera]              250   1e-64
ref|XP_002516017.1| pentatricopeptide repeat-containing protein,...   245   3e-63

>ref|XP_002284545.2| PREDICTED: pentatricopeptide repeat-containing protein
           At2g27610-like [Vitis vinifera]
          Length = 648

 Score =  264 bits (675), Expect = 5e-69
 Identities = 120/170 (70%), Positives = 144/170 (84%)
 Frame = +3

Query: 3   KAVDPGKQLHARLLLSGLGFDAILATKLVNVYSVCNHLHDAYNLFDRIPQRNVFLWNVLI 182
           KA+ PGKQLHA++ L+G GFD ++ATKLVN+Y VC+ L  A  LFDRIP+ N+FLWNVLI
Sbjct: 89  KAIKPGKQLHAQVCLAGFGFDTVIATKLVNLYCVCDSLSSARLLFDRIPKHNIFLWNVLI 148

Query: 183 RGFAWEGPHEMALSLYYRMVEAGLQPDNFTFPFVLKACSALSALEVGREIHEHVVRSRWD 362
           RG+AW GP+E A+ LYY+M + GL PDNFTFPFVLKAC+ALSA+E GREIHEHVV++ W+
Sbjct: 149 RGYAWNGPYEAAVQLYYQMFDYGLVPDNFTFPFVLKACAALSAIEHGREIHEHVVQTGWE 208

Query: 363 SDVFVGAGLIDMYAKCGCVDDARQVFDRITKRDVVLWNAMIAAYSQNGHP 512
            DVFVGA LIDMYAKCGCV  AR+VFD+I  RD VLWN+M+AAYSQNGHP
Sbjct: 209 KDVFVGAALIDMYAKCGCVGSAREVFDKILVRDAVLWNSMLAAYSQNGHP 258



 Score =  115 bits (287), Expect = 5e-24
 Identities = 59/168 (35%), Positives = 95/168 (56%)
 Frame = +3

Query: 6   AVDPGKQLHARLLLSGLGFDAILATKLVNVYSVCNHLHDAYNLFDRIPQRNVFLWNVLIR 185
           A++ G+++H  ++ +G   D  +   L+++Y+ C  +  A  +FD+I  R+  LWN ++ 
Sbjct: 191 AIEHGREIHEHVVQTGWEKDVFVGAALIDMYAKCGCVGSAREVFDKILVRDAVLWNSMLA 250

Query: 186 GFAWEGPHEMALSLYYRMVEAGLQPDNFTFPFVLKACSALSALEVGREIHEHVVRSRWDS 365
            ++  G  +  LSL   MV  GL+P   T    + A +  +AL  GRE+H    R  ++S
Sbjct: 251 AYSQNGHPDACLSLCSEMVLTGLRPTEATLVTAISASADNAALPQGRELHGLSWRQEFES 310

Query: 366 DVFVGAGLIDMYAKCGCVDDARQVFDRITKRDVVLWNAMIAAYSQNGH 509
              V   L+DMYAKCG V  AR +F+R+  + VV WNAMI  Y+ +GH
Sbjct: 311 HDKVKTALVDMYAKCGSVRVARNLFERLGVKRVVSWNAMITGYAMHGH 358



 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 48/162 (29%), Positives = 78/162 (48%), Gaps = 2/162 (1%)
 Frame = +3

Query: 6   AVDPGKQLHARLLLSGLGFDAILATKLVNVYSVCNHLHDAYNLFDRIPQRNVFLWNVLIR 185
           A+  G++LH             + T LV++Y+ C  +  A NLF+R+  + V  WN +I 
Sbjct: 292 ALPQGRELHGLSWRQEFESHDKVKTALVDMYAKCGSVRVARNLFERLGVKRVVSWNAMIT 351

Query: 186 GFAWEGPHEMALSLYYRMVEAGLQPDNFTFPFVLKACSALSALEVGREIHEHVVRS-RWD 362
           G+A  G    AL L+  M     +PD+ TF  VL ACS    LE G    E ++R  + D
Sbjct: 352 GYAMHGHATEALDLFEEMNRVA-KPDHITFVGVLSACSHGGLLEEGWMFFETMIRDYKID 410

Query: 363 SDVFVGAGLIDMYAKCGCVDDARQVFDRI-TKRDVVLWNAMI 485
             V     ++D+    G +D+A  +  ++    D  +W A++
Sbjct: 411 PTVQHYTCMVDLLGHSGRLDEAYNLIMQMKVLPDSGVWGALL 452



 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 27/85 (31%), Positives = 48/85 (56%)
 Frame = +3

Query: 252 LQPDNFTFPFVLKACSALSALEVGREIHEHVVRSRWDSDVFVGAGLIDMYAKCGCVDDAR 431
           L P    +  +L++C A  A++ G+++H  V  + +  D  +   L+++Y  C  +  AR
Sbjct: 71  LTPTYSNYASLLQSCIARKAIKPGKQLHAQVCLAGFGFDTVIATKLVNLYCVCDSLSSAR 130

Query: 432 QVFDRITKRDVVLWNAMIAAYSQNG 506
            +FDRI K ++ LWN +I  Y+ NG
Sbjct: 131 LLFDRIPKHNIFLWNVLIRGYAWNG 155


>ref|XP_003546945.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g23330-like [Glycine max]
          Length = 631

 Score =  256 bits (653), Expect = 2e-66
 Identities = 117/170 (68%), Positives = 142/170 (83%)
 Frame = +3

Query: 3   KAVDPGKQLHARLLLSGLGFDAILATKLVNVYSVCNHLHDAYNLFDRIPQRNVFLWNVLI 182
           KA++PGKQLHARL   G+ ++  LATKLVN YSVCN L +A++LFD+IP+ N+FLWNVLI
Sbjct: 72  KALEPGKQLHARLCQLGIAYNLDLATKLVNFYSVCNSLRNAHHLFDKIPKGNLFLWNVLI 131

Query: 183 RGFAWEGPHEMALSLYYRMVEAGLQPDNFTFPFVLKACSALSALEVGREIHEHVVRSRWD 362
           R +AW GPHE A+SLY++M+E GL+PDNFT PFVLKACSALS +  GR IHE V+RS W+
Sbjct: 132 RAYAWNGPHETAISLYHQMLEYGLKPDNFTLPFVLKACSALSTIGEGRVIHERVIRSGWE 191

Query: 363 SDVFVGAGLIDMYAKCGCVDDARQVFDRITKRDVVLWNAMIAAYSQNGHP 512
            DVFVGA L+DMYAKCGCV DAR VFD+I  RD VLWN+M+AAY+QNGHP
Sbjct: 192 RDVFVGAALVDMYAKCGCVVDARHVFDKIVDRDAVLWNSMLAAYAQNGHP 241



 Score =  109 bits (272), Expect = 3e-22
 Identities = 58/166 (34%), Positives = 94/166 (56%)
 Frame = +3

Query: 9   VDPGKQLHARLLLSGLGFDAILATKLVNVYSVCNHLHDAYNLFDRIPQRNVFLWNVLIRG 188
           +  G+ +H R++ SG   D  +   LV++Y+ C  + DA ++FD+I  R+  LWN ++  
Sbjct: 175 IGEGRVIHERVIRSGWERDVFVGAALVDMYAKCGCVVDARHVFDKIVDRDAVLWNSMLAA 234

Query: 189 FAWEGPHEMALSLYYRMVEAGLQPDNFTFPFVLKACSALSALEVGREIHEHVVRSRWDSD 368
           +A  G  + +LSL   M   G++P   T   V+ + + ++ L  GREIH    R  +  +
Sbjct: 235 YAQNGHPDESLSLCCEMAAKGVRPTEATLVTVISSSADIACLPHGREIHGFGWRHGFQYN 294

Query: 369 VFVGAGLIDMYAKCGCVDDARQVFDRITKRDVVLWNAMIAAYSQNG 506
             V   LIDMYAKCG V  A  +F+R+ ++ VV WNA+I  Y+ +G
Sbjct: 295 DKVKTALIDMYAKCGSVKVACVLFERLREKRVVSWNAIITGYAMHG 340



 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 51/169 (30%), Positives = 91/169 (53%), Gaps = 5/169 (2%)
 Frame = +3

Query: 18  GKQLHARLLLSGLGFDAILATKLVNVYSVCNHLHDAYNLFDRIPQRNVFLWNVLIRGFAW 197
           G+++H      G  ++  + T L+++Y+ C  +  A  LF+R+ ++ V  WN +I G+A 
Sbjct: 279 GREIHGFGWRHGFQYNDKVKTALIDMYAKCGSVKVACVLFERLREKRVVSWNAIITGYAM 338

Query: 198 EGPHEMALSLYYRMVEAGLQPDNFTFPFVLKACSALSALEVGREIHEHVVRS-RWDSDVF 374
            G    AL L+ RM++   QPD+ TF   L ACS    L+ GR ++  +VR  R +  V 
Sbjct: 339 HGLAVEALDLFERMMKEA-QPDHITFVGALAACSRGRLLDEGRALYNLMVRDCRINPTVE 397

Query: 375 VGAGLIDMYAKCGCVDDARQVFDRITKRDVV----LWNAMIAAYSQNGH 509
               ++D+   CG +D+A   +D I + DV+    +W A++ +   +G+
Sbjct: 398 HYTCMVDLLGHCGQLDEA---YDLIRQMDVMPDSGVWGALLNSCKTHGN 443



 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 23/82 (28%), Positives = 50/82 (60%)
 Frame = +3

Query: 261 DNFTFPFVLKACSALSALEVGREIHEHVVRSRWDSDVFVGAGLIDMYAKCGCVDDARQVF 440
           +++ +  +L++C +  ALE G+++H  + +     ++ +   L++ Y+ C  + +A  +F
Sbjct: 57  NHYYYASLLESCISAKALEPGKQLHARLCQLGIAYNLDLATKLVNFYSVCNSLRNAHHLF 116

Query: 441 DRITKRDVVLWNAMIAAYSQNG 506
           D+I K ++ LWN +I AY+ NG
Sbjct: 117 DKIPKGNLFLWNVLIRAYAWNG 138


>ref|XP_004154387.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
           chloroplastic-like [Cucumis sativus]
           gi|449522468|ref|XP_004168248.1| PREDICTED:
           pentatricopeptide repeat-containing protein At3g46790,
           chloroplastic-like [Cucumis sativus]
          Length = 574

 Score =  252 bits (643), Expect = 3e-65
 Identities = 115/170 (67%), Positives = 145/170 (85%)
 Frame = +3

Query: 3   KAVDPGKQLHARLLLSGLGFDAILATKLVNVYSVCNHLHDAYNLFDRIPQRNVFLWNVLI 182
           KA++PGKQLHAR+   G+ F+ +LATKLVN+Y +CN L +A+ LFDRI +RN+FLWNV+I
Sbjct: 15  KAIEPGKQLHARICQVGISFNPLLATKLVNLYCICNSLTNAHLLFDRISKRNLFLWNVMI 74

Query: 183 RGFAWEGPHEMALSLYYRMVEAGLQPDNFTFPFVLKACSALSALEVGREIHEHVVRSRWD 362
           RG+AW GP+E+A+SLYY+M + GL PD FTFPFVLKACSALSA+E G++IH+ V+RS  +
Sbjct: 75  RGYAWNGPYELAISLYYQMRDYGLVPDKFTFPFVLKACSALSAMEEGKKIHKDVIRSGLE 134

Query: 363 SDVFVGAGLIDMYAKCGCVDDARQVFDRITKRDVVLWNAMIAAYSQNGHP 512
           SDVFVGA LIDMYAKCGCV+ ARQVFD+I +RDVV WN+M+A YSQNG P
Sbjct: 135 SDVFVGAALIDMYAKCGCVESARQVFDKIDERDVVCWNSMLATYSQNGQP 184



 Score =  111 bits (278), Expect = 5e-23
 Identities = 57/168 (33%), Positives = 98/168 (58%)
 Frame = +3

Query: 6   AVDPGKQLHARLLLSGLGFDAILATKLVNVYSVCNHLHDAYNLFDRIPQRNVFLWNVLIR 185
           A++ GK++H  ++ SGL  D  +   L+++Y+ C  +  A  +FD+I +R+V  WN ++ 
Sbjct: 117 AMEEGKKIHKDVIRSGLESDVFVGAALIDMYAKCGCVESARQVFDKIDERDVVCWNSMLA 176

Query: 186 GFAWEGPHEMALSLYYRMVEAGLQPDNFTFPFVLKACSALSALEVGREIHEHVVRSRWDS 365
            ++  G  + +L+L   M   GL+P   TF   + A +    L  G+E+H +  R  ++S
Sbjct: 177 TYSQNGQPDESLALCRVMAFNGLKPTEGTFVISIAASADNGLLPQGKELHGYSWRHGFES 236

Query: 366 DVFVGAGLIDMYAKCGCVDDARQVFDRITKRDVVLWNAMIAAYSQNGH 509
           +  V   L+DMYAK G V+ AR +F+ + ++ VV WNAMI  Y+ +GH
Sbjct: 237 NDKVKTALMDMYAKSGSVNVARSLFELLEEKRVVSWNAMITGYAMHGH 284



 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 44/167 (26%), Positives = 84/167 (50%), Gaps = 3/167 (1%)
 Frame = +3

Query: 18  GKQLHARLLLSGLGFDAILATKLVNVYSVCNHLHDAYNLFDRIPQRNVFLWNVLIRGFAW 197
           GK+LH      G   +  + T L+++Y+    ++ A +LF+ + ++ V  WN +I G+A 
Sbjct: 222 GKELHGYSWRHGFESNDKVKTALMDMYAKSGSVNVARSLFELLEEKRVVSWNAMITGYAM 281

Query: 198 EGPHEMALSLYYRMVEAGLQPDNFTFPFVLKACSALSALEVGREIHEHVVR--SRWDSDV 371
            G    AL L+  M +  + PD+ TF  VL ACS    L  G+     ++   + W + V
Sbjct: 282 HGHANEALDLFKEM-KGKVLPDHITFVGVLAACSHGGLLNEGKMHFRSMISDFNIWPT-V 339

Query: 372 FVGAGLIDMYAKCGCVDDA-RQVFDRITKRDVVLWNAMIAAYSQNGH 509
                +ID+   CG +++A + + +   + D  +W A++ +   +G+
Sbjct: 340 QHYTCMIDLLGHCGRLEEAYKLIMEMRVEPDAGVWGALLHSCKIHGN 386



 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 24/75 (32%), Positives = 45/75 (60%)
 Frame = +3

Query: 282 VLKACSALSALEVGREIHEHVVRSRWDSDVFVGAGLIDMYAKCGCVDDARQVFDRITKRD 461
           +L++C    A+E G+++H  + +     +  +   L+++Y  C  + +A  +FDRI+KR+
Sbjct: 7   LLQSCVVRKAIEPGKQLHARICQVGISFNPLLATKLVNLYCICNSLTNAHLLFDRISKRN 66

Query: 462 VVLWNAMIAAYSQNG 506
           + LWN MI  Y+ NG
Sbjct: 67  LFLWNVMIRGYAWNG 81


>emb|CBI36131.3| unnamed protein product [Vitis vinifera]
          Length = 550

 Score =  250 bits (638), Expect = 1e-64
 Identities = 116/172 (67%), Positives = 140/172 (81%), Gaps = 3/172 (1%)
 Frame = +3

Query: 3   KAVDPGKQLHARLLLSGLGFDAILATKLVNVYSVCNHLHDAYNLFDRIPQRNVFLWNVLI 182
           KA+ PGKQLHA++ L+G GFD ++ATKLVN+Y VC+ L  A  LFDRIP+ N+FLWNVLI
Sbjct: 89  KAIKPGKQLHAQVCLAGFGFDTVIATKLVNLYCVCDSLSSARLLFDRIPKHNIFLWNVLI 148

Query: 183 RGFAWEGPHEMALSLYYRMVEAGLQPDNFTFPFVLKACSALSALEVGREIHEHVVRSRWD 362
           RG+AW GP+E A+ LYY+M + GL PDNFTFPFVLKAC+ALSA+E GREIHEHVV++ W+
Sbjct: 149 RGYAWNGPYEAAVQLYYQMFDYGLVPDNFTFPFVLKACAALSAIEHGREIHEHVVQTGWE 208

Query: 363 SDVFVGAGLIDMYAKCGCVDDARQVFDRITKRDVVL---WNAMIAAYSQNGH 509
            DVFVGA LIDMYAKCGCV  AR+VFD+I  RD VL   WNAMI  Y+ +GH
Sbjct: 209 KDVFVGAALIDMYAKCGCVGSAREVFDKILVRDAVLVVSWNAMITGYAMHGH 260



 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 47/165 (28%), Positives = 83/165 (50%), Gaps = 5/165 (3%)
 Frame = +3

Query: 6   AVDPGKQLHARLLLSGLGFDAILATKLVNVYSVCNHLHDAYNLFDRIPQRNVFL---WNV 176
           A++ G+++H  ++ +G   D  +   L+++Y+ C  +  A  +FD+I  R+  L   WN 
Sbjct: 191 AIEHGREIHEHVVQTGWEKDVFVGAALIDMYAKCGCVGSAREVFDKILVRDAVLVVSWNA 250

Query: 177 LIRGFAWEGPHEMALSLYYRMVEAGLQPDNFTFPFVLKACSALSALEVGREIHEHVVRS- 353
           +I G+A  G    AL L+  M     +PD+ TF  VL ACS    LE G    E ++R  
Sbjct: 251 MITGYAMHGHATEALDLFEEMNRVA-KPDHITFVGVLSACSHGGLLEEGWMFFETMIRDY 309

Query: 354 RWDSDVFVGAGLIDMYAKCGCVDDARQVFDRI-TKRDVVLWNAMI 485
           + D  V     ++D+    G +D+A  +  ++    D  +W A++
Sbjct: 310 KIDPTVQHYTCMVDLLGHSGRLDEAYNLIMQMKVLPDSGVWGALL 354



 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 27/85 (31%), Positives = 48/85 (56%)
 Frame = +3

Query: 252 LQPDNFTFPFVLKACSALSALEVGREIHEHVVRSRWDSDVFVGAGLIDMYAKCGCVDDAR 431
           L P    +  +L++C A  A++ G+++H  V  + +  D  +   L+++Y  C  +  AR
Sbjct: 71  LTPTYSNYASLLQSCIARKAIKPGKQLHAQVCLAGFGFDTVIATKLVNLYCVCDSLSSAR 130

Query: 432 QVFDRITKRDVVLWNAMIAAYSQNG 506
            +FDRI K ++ LWN +I  Y+ NG
Sbjct: 131 LLFDRIPKHNIFLWNVLIRGYAWNG 155


>ref|XP_002516017.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223544922|gb|EEF46437.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 472

 Score =  245 bits (625), Expect = 3e-63
 Identities = 115/170 (67%), Positives = 139/170 (81%)
 Frame = +3

Query: 3   KAVDPGKQLHARLLLSGLGFDAILATKLVNVYSVCNHLHDAYNLFDRIPQRNVFLWNVLI 182
           KA+ PGKQLHA L   GL FD +LA KLVN+Y +CN L +A  LFD+IP+RN+FLWNVLI
Sbjct: 101 KALIPGKQLHASLCHVGLQFDRVLAPKLVNLYCICNSLCEARLLFDKIPKRNLFLWNVLI 160

Query: 183 RGFAWEGPHEMALSLYYRMVEAGLQPDNFTFPFVLKACSALSALEVGREIHEHVVRSRWD 362
           RG+AW GP+E ++ LYY++ + GL PDNFTFPFVLKACSALSA+E GR IHE V+RS W+
Sbjct: 161 RGYAWYGPYEASIQLYYKIFDYGLVPDNFTFPFVLKACSALSAIEDGRLIHEQVMRSGWE 220

Query: 363 SDVFVGAGLIDMYAKCGCVDDARQVFDRITKRDVVLWNAMIAAYSQNGHP 512
            DVFVGA LIDMY+KCGCVD+AR+VF +   RD VLWN+M+AAYSQNG P
Sbjct: 221 RDVFVGAALIDMYSKCGCVDNAREVFHKFPVRDAVLWNSMLAAYSQNGKP 270



 Score =  118 bits (296), Expect = 4e-25
 Identities = 57/168 (33%), Positives = 102/168 (60%)
 Frame = +3

Query: 6   AVDPGKQLHARLLLSGLGFDAILATKLVNVYSVCNHLHDAYNLFDRIPQRNVFLWNVLIR 185
           A++ G+ +H +++ SG   D  +   L+++YS C  + +A  +F + P R+  LWN ++ 
Sbjct: 203 AIEDGRLIHEQVMRSGWERDVFVGAALIDMYSKCGCVDNAREVFHKFPVRDAVLWNSMLA 262

Query: 186 GFAWEGPHEMALSLYYRMVEAGLQPDNFTFPFVLKACSALSALEVGREIHEHVVRSRWDS 365
            ++  G  + +L+L   MV AG++P   T   V+ A + ++AL  GRE+H    R R++S
Sbjct: 263 AYSQNGKPDKSLALCSEMVLAGVRPTEATLVTVISASADIAALPQGRELHGFAWRRRFES 322

Query: 366 DVFVGAGLIDMYAKCGCVDDARQVFDRITKRDVVLWNAMIAAYSQNGH 509
           +  V   LIDMYAKCG +  A+ +F+++  ++VV WNA+I  Y+ +G+
Sbjct: 323 NDKVKTTLIDMYAKCGTMKVAQNLFEQLRDKNVVSWNAIITGYAMHGY 370



 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 34/98 (34%), Positives = 53/98 (54%)
 Frame = +3

Query: 6   AVDPGKQLHARLLLSGLGFDAILATKLVNVYSVCNHLHDAYNLFDRIPQRNVFLWNVLIR 185
           A+  G++LH          +  + T L+++Y+ C  +  A NLF+++  +NV  WN +I 
Sbjct: 304 ALPQGRELHGFAWRRRFESNDKVKTTLIDMYAKCGTMKVAQNLFEQLRDKNVVSWNAIIT 363

Query: 186 GFAWEGPHEMALSLYYRMVEAGLQPDNFTFPFVLKACS 299
           G+A  G     L L+ RM E   +PD+ TF  VL ACS
Sbjct: 364 GYAMHGYSNEVLILFDRMREEA-KPDHITFVGVLLACS 400