BLASTX nr result

ID: Dioscorea21_contig00033481 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00033481
         (272 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002460367.1| hypothetical protein SORBIDRAFT_02g027040 [S...   137   9e-31
ref|NP_001063419.1| Os09g0466400 [Oryza sativa Japonica Group] g...   135   3e-30
gb|EAZ09420.1| hypothetical protein OsI_31693 [Oryza sativa Indi...   135   3e-30
ref|NP_001151888.1| ZF-HD protein dimerisation region containing...   134   6e-30
ref|XP_003574645.1| PREDICTED: ZF-HD homeobox protein At4g24660-...   130   1e-28

>ref|XP_002460367.1| hypothetical protein SORBIDRAFT_02g027040 [Sorghum bicolor]
           gi|241923744|gb|EER96888.1| hypothetical protein
           SORBIDRAFT_02g027040 [Sorghum bicolor]
          Length = 302

 Score =  137 bits (345), Expect = 9e-31
 Identities = 64/102 (62%), Positives = 71/102 (69%), Gaps = 16/102 (15%)
 Frame = +3

Query: 12  GTSTGKYRECLKNHAVSIGGHAVDGCGEFMPAGDDGSVEALRCAACGCHRNFHRKDSPGA 191
           G   G+YRECLKNHAV IGGHAVDGCGEFMPAG++G+++ALRCAAC CHRNFHRK+SP A
Sbjct: 68  GAGGGRYRECLKNHAVGIGGHAVDGCGEFMPAGEEGTLDALRCAACNCHRNFHRKESPAA 127

Query: 192 TAGDDPSP---------------FSPYYRT-TPAGYLHHHHH 269
             G   S                FSPYYRT   AGY HHHHH
Sbjct: 128 AEGSPISSAALVAYGGTPHQHHHFSPYYRTPAGAGYFHHHHH 169


>ref|NP_001063419.1| Os09g0466400 [Oryza sativa Japonica Group]
           gi|46806323|dbj|BAD17515.1| putative ZF-HD homeobox
           protein [Oryza sativa Japonica Group]
           gi|113631652|dbj|BAF25333.1| Os09g0466400 [Oryza sativa
           Japonica Group] gi|215766113|dbj|BAG98341.1| unnamed
           protein product [Oryza sativa Japonica Group]
          Length = 279

 Score =  135 bits (340), Expect = 3e-30
 Identities = 64/102 (62%), Positives = 71/102 (69%), Gaps = 14/102 (13%)
 Frame = +3

Query: 9   PGTSTGKYRECLKNHAVSIGGHAVDGCGEFMPAGDDGSVEALRCAACGCHRNFHRKDSPG 188
           P    G+YRECLKNHAV IGGHAVDGCGEFM AG++G+++ALRCAAC CHRNFHRK+S  
Sbjct: 50  PSCGGGRYRECLKNHAVGIGGHAVDGCGEFMAAGEEGTIDALRCAACNCHRNFHRKESES 109

Query: 189 ATAGDDP-SP-------------FSPYYRTTPAGYLHHHHHH 272
                 P SP             FSPYYR TPAGYLHHH HH
Sbjct: 110 LAGEGSPFSPAAVVPYGATPHHQFSPYYR-TPAGYLHHHQHH 150


>gb|EAZ09420.1| hypothetical protein OsI_31693 [Oryza sativa Indica Group]
          Length = 279

 Score =  135 bits (340), Expect = 3e-30
 Identities = 64/102 (62%), Positives = 71/102 (69%), Gaps = 14/102 (13%)
 Frame = +3

Query: 9   PGTSTGKYRECLKNHAVSIGGHAVDGCGEFMPAGDDGSVEALRCAACGCHRNFHRKDSPG 188
           P    G+YRECLKNHAV IGGHAVDGCGEFM AG++G+++ALRCAAC CHRNFHRK+S  
Sbjct: 50  PSCGGGRYRECLKNHAVGIGGHAVDGCGEFMAAGEEGTIDALRCAACNCHRNFHRKESES 109

Query: 189 ATAGDDP-SP-------------FSPYYRTTPAGYLHHHHHH 272
                 P SP             FSPYYR TPAGYLHHH HH
Sbjct: 110 LAGEGSPFSPAAVVPYGATPHHQFSPYYR-TPAGYLHHHQHH 150


>ref|NP_001151888.1| ZF-HD protein dimerisation region containing protein [Zea mays]
           gi|195650611|gb|ACG44773.1| ZF-HD protein dimerisation
           region containing protein [Zea mays]
          Length = 273

 Score =  134 bits (338), Expect = 6e-30
 Identities = 60/92 (65%), Positives = 67/92 (72%), Gaps = 11/92 (11%)
 Frame = +3

Query: 24  GKYRECLKNHAVSIGGHAVDGCGEFMPAGDDGSVEALRCAACGCHRNFHRKDSP------ 185
           G+YRECLKNHAV IGGHAVDGCGEFMPAG++G+++ALRCAACGCHRNFHRK+SP      
Sbjct: 51  GRYRECLKNHAVGIGGHAVDGCGEFMPAGEEGTLDALRCAACGCHRNFHRKESPEGSPAA 110

Query: 186 -----GATAGDDPSPFSPYYRTTPAGYLHHHH 266
                G  A      FSPYYRT    Y HHHH
Sbjct: 111 LVAYGGGAATPHHHHFSPYYRTPAGSYFHHHH 142


>ref|XP_003574645.1| PREDICTED: ZF-HD homeobox protein At4g24660-like [Brachypodium
           distachyon]
          Length = 304

 Score =  130 bits (326), Expect = 1e-28
 Identities = 71/121 (58%), Positives = 77/121 (63%), Gaps = 32/121 (26%)
 Frame = +3

Query: 6   RPGTSTG--------KYRECLKNHAVSIGGHAVDGCGEFMPAGDDGSVEALRCAACGCHR 161
           +PG S G        +YRECLKNHAV IGGHAVDGCGEFM AG+DGS++AL CAACGCHR
Sbjct: 45  KPGDSGGGRFRTPSVRYRECLKNHAVGIGGHAVDGCGEFMAAGEDGSIDALSCAACGCHR 104

Query: 162 NFHRK---DSPGATA-------------GDDPSP-----FSPYYRTTPAGYLHH---HHH 269
           NFHRK   +SP A A                P P     FSPYYR TPAGYLHH   HHH
Sbjct: 105 NFHRKESEESPAAAAVAAAAAGAITPYGAMPPLPGHHGQFSPYYR-TPAGYLHHPQQHHH 163

Query: 270 H 272
           H
Sbjct: 164 H 164


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