BLASTX nr result
ID: Dioscorea21_contig00033458
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dioscorea21_contig00033458
(274 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002453356.1| hypothetical protein SORBIDRAFT_04g004500 [S... 140 1e-31
ref|XP_003569969.1| PREDICTED: pentatricopeptide repeat-containi... 138 5e-31
dbj|BAD26238.1| putative pentatricopeptide (PPR) repeat-containi... 137 9e-31
gb|EEE56380.1| hypothetical protein OsJ_05522 [Oryza sativa Japo... 137 9e-31
ref|NP_001046005.1| Os02g0167200 [Oryza sativa Japonica Group] g... 137 9e-31
>ref|XP_002453356.1| hypothetical protein SORBIDRAFT_04g004500 [Sorghum bicolor]
gi|241933187|gb|EES06332.1| hypothetical protein
SORBIDRAFT_04g004500 [Sorghum bicolor]
Length = 807
Score = 140 bits (352), Expect = 1e-31
Identities = 63/89 (70%), Positives = 75/89 (84%)
Frame = +1
Query: 1 IDMYAKCGNVDQARIFFDSMPVKNVVSWNEMIHGYAQNGCGEKAVELFEYMLRSEEKPDD 180
IDMYAKCGN+D AR+FF+ M VKN+V+WNEMIHGYAQNG GEKAVELFEYML +++KPD
Sbjct: 561 IDMYAKCGNMDDARLFFNCMIVKNIVAWNEMIHGYAQNGFGEKAVELFEYMLTTKQKPDS 620
Query: 181 VTFISVFTACSHVGLIDEGIKYLNLIEKH 267
VTFI+V T CSH GL+DE I Y N +E +
Sbjct: 621 VTFIAVLTGCSHSGLVDEAIAYFNSMESN 649
Score = 64.3 bits (155), Expect = 1e-08
Identities = 29/70 (41%), Positives = 47/70 (67%)
Frame = +1
Query: 1 IDMYAKCGNVDQARIFFDSMPVKNVVSWNEMIHGYAQNGCGEKAVELFEYMLRSEEKPDD 180
IDMYAK +D+A F+SM ++VSWN ++ GY Q GC E+A+E+ + M S +P++
Sbjct: 293 IDMYAKGMKMDEAMKVFESMSSVSIVSWNILVTGYGQLGCYERALEVLDLMQESGFEPNE 352
Query: 181 VTFISVFTAC 210
VT+ ++ +C
Sbjct: 353 VTYSNMLASC 362
Score = 62.4 bits (150), Expect = 4e-08
Identities = 29/79 (36%), Positives = 47/79 (59%)
Frame = +1
Query: 1 IDMYAKCGNVDQARIFFDSMPVKNVVSWNEMIHGYAQNGCGEKAVELFEYMLRSEEKPDD 180
IDMY+KCG V A+I F+ M ++VV WN MI G A + E+A + F+ M + P +
Sbjct: 460 IDMYSKCGQVGIAQIIFNMMTERDVVCWNSMISGLAIHSLNEEAFDFFKQMRENGMFPTE 519
Query: 181 VTFISVFTACSHVGLIDEG 237
++ S+ +C+ + I +G
Sbjct: 520 SSYASMINSCARLSSIPQG 538
>ref|XP_003569969.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g20770-like [Brachypodium distachyon]
Length = 805
Score = 138 bits (347), Expect = 5e-31
Identities = 61/87 (70%), Positives = 73/87 (83%)
Frame = +1
Query: 1 IDMYAKCGNVDQARIFFDSMPVKNVVSWNEMIHGYAQNGCGEKAVELFEYMLRSEEKPDD 180
IDMYAKCGN+D AR+FFD M KN+V+WNEMIHGYAQNG GEKAV+LFEYML +E++PD
Sbjct: 559 IDMYAKCGNMDDARVFFDCMVTKNIVAWNEMIHGYAQNGFGEKAVDLFEYMLTTEQRPDG 618
Query: 181 VTFISVFTACSHVGLIDEGIKYLNLIE 261
VTFI+V T CSH GL+DE I + N +E
Sbjct: 619 VTFIAVLTGCSHSGLVDEAIAFFNSME 645
Score = 63.9 bits (154), Expect = 1e-08
Identities = 34/86 (39%), Positives = 49/86 (56%)
Frame = +1
Query: 16 KCGNVDQARIFFDSMPVKNVVSWNEMIHGYAQNGCGEKAVELFEYMLRSEEKPDDVTFIS 195
+ G++D AR D MP +NVVSWN +I A++ +A+EL+E MLR P T S
Sbjct: 86 RAGDLDAARALLDEMPDRNVVSWNTVIAALARSERAGEALELYEGMLREGLVPTHFTLAS 145
Query: 196 VFTACSHVGLIDEGIKYLNLIEKHGI 273
V +AC V +D+G + L K G+
Sbjct: 146 VLSACGAVAALDDGRRCHGLAVKVGL 171
Score = 63.5 bits (153), Expect = 2e-08
Identities = 30/90 (33%), Positives = 51/90 (56%)
Frame = +1
Query: 1 IDMYAKCGNVDQARIFFDSMPVKNVVSWNEMIHGYAQNGCGEKAVELFEYMLRSEEKPDD 180
+DMY+KCG + ARI F+ M ++VV WN MI G A + E+A + F+ M + P +
Sbjct: 458 VDMYSKCGQIGIARIIFNRMTERDVVCWNSMISGLAIHSLNEEAFDFFKQMRGNGMMPTE 517
Query: 181 VTFISVFTACSHVGLIDEGIKYLNLIEKHG 270
++ S+ +C+ + + +G + I K G
Sbjct: 518 SSYASMINSCARLSSVPQGRQIHAQIVKDG 547
Score = 62.4 bits (150), Expect = 4e-08
Identities = 29/70 (41%), Positives = 44/70 (62%)
Frame = +1
Query: 1 IDMYAKCGNVDQARIFFDSMPVKNVVSWNEMIHGYAQNGCGEKAVELFEYMLRSEEKPDD 180
IDMY KC +D+A FDS+P + VSWN +I G+ Q G KA+E+ M S +P++
Sbjct: 291 IDMYTKCMQMDEAVKVFDSLPNISTVSWNILITGFGQAGSYAKALEVLNLMEESGSEPNE 350
Query: 181 VTFISVFTAC 210
VT+ ++ +C
Sbjct: 351 VTYSNMLASC 360
>dbj|BAD26238.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group] gi|218190136|gb|EEC72563.1|
hypothetical protein OsI_05996 [Oryza sativa Indica
Group]
Length = 803
Score = 137 bits (345), Expect = 9e-31
Identities = 60/87 (68%), Positives = 75/87 (86%)
Frame = +1
Query: 1 IDMYAKCGNVDQARIFFDSMPVKNVVSWNEMIHGYAQNGCGEKAVELFEYMLRSEEKPDD 180
IDMYAKCGN+D AR+FFD+M +KN+V+WNEMIHGYAQNG G+KAVELFEYML +E+KPD
Sbjct: 560 IDMYAKCGNMDDARLFFDTMMMKNIVAWNEMIHGYAQNGLGDKAVELFEYMLTTEQKPDA 619
Query: 181 VTFISVFTACSHVGLIDEGIKYLNLIE 261
VTFI+V T CSH GL+D+ + + N +E
Sbjct: 620 VTFIAVLTGCSHSGLVDKAMAFFNSME 646
Score = 62.4 bits (150), Expect = 4e-08
Identities = 28/70 (40%), Positives = 44/70 (62%)
Frame = +1
Query: 1 IDMYAKCGNVDQARIFFDSMPVKNVVSWNEMIHGYAQNGCGEKAVELFEYMLRSEEKPDD 180
IDMY KC +D+A F+S+P +VSWN +I G+ Q G KAVE+ M + +P++
Sbjct: 292 IDMYTKCVEMDEAVKVFESLPSVTIVSWNILITGFGQEGSCAKAVEVLSLMQEAGFEPNE 351
Query: 181 VTFISVFTAC 210
VT+ ++ +C
Sbjct: 352 VTYSNLLASC 361
Score = 57.8 bits (138), Expect = 9e-07
Identities = 27/90 (30%), Positives = 48/90 (53%)
Frame = +1
Query: 1 IDMYAKCGNVDQARIFFDSMPVKNVVSWNEMIHGYAQNGCGEKAVELFEYMLRSEEKPDD 180
+DMY+KCG + AR F+ M ++VV WN +I G + ++A + F+ M + P +
Sbjct: 459 VDMYSKCGQIGIARSIFNKMTERDVVCWNSIISGLTIHSLNKEAFDFFKQMRENGIMPTE 518
Query: 181 VTFISVFTACSHVGLIDEGIKYLNLIEKHG 270
++ S+ +CS + I G + + K G
Sbjct: 519 SSYASMINSCSRLSSIPHGRQIHAQVMKDG 548
>gb|EEE56380.1| hypothetical protein OsJ_05522 [Oryza sativa Japonica Group]
Length = 518
Score = 137 bits (345), Expect = 9e-31
Identities = 60/87 (68%), Positives = 75/87 (86%)
Frame = +1
Query: 1 IDMYAKCGNVDQARIFFDSMPVKNVVSWNEMIHGYAQNGCGEKAVELFEYMLRSEEKPDD 180
IDMYAKCGN+D AR+FFD+M +KN+V+WNEMIHGYAQNG G+KAVELFEYML +E+KPD
Sbjct: 267 IDMYAKCGNMDDARLFFDTMMMKNIVAWNEMIHGYAQNGLGDKAVELFEYMLTTEQKPDA 326
Query: 181 VTFISVFTACSHVGLIDEGIKYLNLIE 261
VTFI+V T CSH GL+D+ + + N +E
Sbjct: 327 VTFIAVLTGCSHSGLVDKAMAFFNSME 353
Score = 58.5 bits (140), Expect = 5e-07
Identities = 26/68 (38%), Positives = 42/68 (61%)
Frame = +1
Query: 7 MYAKCGNVDQARIFFDSMPVKNVVSWNEMIHGYAQNGCGEKAVELFEYMLRSEEKPDDVT 186
MY KC +D+A F+S+P +VSWN +I G+ Q G KAVE+ M + +P++VT
Sbjct: 1 MYTKCVEMDEAVKVFESLPSVTIVSWNILITGFGQEGSCAKAVEVLSLMQEAGFEPNEVT 60
Query: 187 FISVFTAC 210
+ ++ +C
Sbjct: 61 YSNLLASC 68
Score = 57.8 bits (138), Expect = 9e-07
Identities = 27/90 (30%), Positives = 48/90 (53%)
Frame = +1
Query: 1 IDMYAKCGNVDQARIFFDSMPVKNVVSWNEMIHGYAQNGCGEKAVELFEYMLRSEEKPDD 180
+DMY+KCG + AR F+ M ++VV WN +I G + ++A + F+ M + P +
Sbjct: 166 VDMYSKCGQIGIARSIFNKMTERDVVCWNSIISGLTIHSLNKEAFDFFKQMRENGIMPTE 225
Query: 181 VTFISVFTACSHVGLIDEGIKYLNLIEKHG 270
++ S+ +CS + I G + + K G
Sbjct: 226 SSYASMINSCSRLSSIPHGRQIHAQVMKDG 255
>ref|NP_001046005.1| Os02g0167200 [Oryza sativa Japonica Group]
gi|113535536|dbj|BAF07919.1| Os02g0167200, partial
[Oryza sativa Japonica Group]
Length = 526
Score = 137 bits (345), Expect = 9e-31
Identities = 60/87 (68%), Positives = 75/87 (86%)
Frame = +1
Query: 1 IDMYAKCGNVDQARIFFDSMPVKNVVSWNEMIHGYAQNGCGEKAVELFEYMLRSEEKPDD 180
IDMYAKCGN+D AR+FFD+M +KN+V+WNEMIHGYAQNG G+KAVELFEYML +E+KPD
Sbjct: 283 IDMYAKCGNMDDARLFFDTMMMKNIVAWNEMIHGYAQNGLGDKAVELFEYMLTTEQKPDA 342
Query: 181 VTFISVFTACSHVGLIDEGIKYLNLIE 261
VTFI+V T CSH GL+D+ + + N +E
Sbjct: 343 VTFIAVLTGCSHSGLVDKAMAFFNSME 369
Score = 62.4 bits (150), Expect = 4e-08
Identities = 28/70 (40%), Positives = 44/70 (62%)
Frame = +1
Query: 1 IDMYAKCGNVDQARIFFDSMPVKNVVSWNEMIHGYAQNGCGEKAVELFEYMLRSEEKPDD 180
IDMY KC +D+A F+S+P +VSWN +I G+ Q G KAVE+ M + +P++
Sbjct: 15 IDMYTKCVEMDEAVKVFESLPSVTIVSWNILITGFGQEGSCAKAVEVLSLMQEAGFEPNE 74
Query: 181 VTFISVFTAC 210
VT+ ++ +C
Sbjct: 75 VTYSNLLASC 84
Score = 57.8 bits (138), Expect = 9e-07
Identities = 27/90 (30%), Positives = 48/90 (53%)
Frame = +1
Query: 1 IDMYAKCGNVDQARIFFDSMPVKNVVSWNEMIHGYAQNGCGEKAVELFEYMLRSEEKPDD 180
+DMY+KCG + AR F+ M ++VV WN +I G + ++A + F+ M + P +
Sbjct: 182 VDMYSKCGQIGIARSIFNKMTERDVVCWNSIISGLTIHSLNKEAFDFFKQMRENGIMPTE 241
Query: 181 VTFISVFTACSHVGLIDEGIKYLNLIEKHG 270
++ S+ +CS + I G + + K G
Sbjct: 242 SSYASMINSCSRLSSIPHGRQIHAQVMKDG 271