BLASTX nr result

ID: Dioscorea21_contig00033454 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00033454
         (743 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002302824.1| predicted protein [Populus trichocarpa] gi|2...   273   3e-71
gb|ABK26521.1| unknown [Picea sitchensis]                             231   9e-59
ref|XP_003631669.1| PREDICTED: pentatricopeptide repeat-containi...   226   3e-57
emb|CBI32403.3| unnamed protein product [Vitis vinifera]              226   3e-57
emb|CAN64990.1| hypothetical protein VITISV_001772 [Vitis vinifera]   226   3e-57

>ref|XP_002302824.1| predicted protein [Populus trichocarpa] gi|222844550|gb|EEE82097.1|
           predicted protein [Populus trichocarpa]
          Length = 581

 Score =  273 bits (698), Expect = 3e-71
 Identities = 131/189 (69%), Positives = 152/189 (80%)
 Frame = +2

Query: 5   NVELAGLAARSLFELDSKNPGRYICLSNIYTSLGKIDEANQIRNLMRRRGVKKTDGYSVI 184
           NV+LA + AR+LF+LD  N GRY+ L NIYT  GK  EA+ IR LM+ RGVKK  GYSVI
Sbjct: 393 NVDLAEMVARALFDLDPHNAGRYVILYNIYTLTGKRKEADSIRTLMKNRGVKKIAGYSVI 452

Query: 185 EVKNKVYKFVVGDQMNPQSKLIYRELAILMDRIREEGYVPNTNFALHDVEEETKETSLYV 364
           E+KNK+Y FV GD+ +PQ+ LIY EL  LMDRIR+EGY P+ NF LHDV+EETKE+ LY+
Sbjct: 453 EIKNKLYAFVAGDRSHPQTDLIYSELERLMDRIRQEGYTPDINFVLHDVDEETKESMLYL 512

Query: 365 HSEKLAIVFGLMNSAPDSDIRIHKNLRVCGDCHTASKFISKVTQRTIVMRDSHRFHHFSN 544
           HSEKLAIVFGL+N  P S IRI KNLRVCGDCHTA+KFISKVT R IV+RD+HRFHHF N
Sbjct: 513 HSEKLAIVFGLLNLGPGSVIRIRKNLRVCGDCHTATKFISKVTGREIVVRDAHRFHHFKN 572

Query: 545 GMCSCGDYW 571
           G CSC DYW
Sbjct: 573 GACSCRDYW 581


>gb|ABK26521.1| unknown [Picea sitchensis]
          Length = 370

 Score =  231 bits (590), Expect = 9e-59
 Identities = 108/189 (57%), Positives = 139/189 (73%)
 Frame = +2

Query: 5   NVELAGLAARSLFELDSKNPGRYICLSNIYTSLGKIDEANQIRNLMRRRGVKKTDGYSVI 184
           N+ELA  A   L EL  +NPG Y+ LSNIY + G+ D+A ++R +M+ R VKK  G S I
Sbjct: 182 NIELAERAVEQLIELTPENPGTYVLLSNIYAAAGRWDDAGKVRKMMKDRSVKKEPGCSWI 241

Query: 185 EVKNKVYKFVVGDQMNPQSKLIYRELAILMDRIREEGYVPNTNFALHDVEEETKETSLYV 364
           EV+NKV+ F+VGD  +PQ + IY  L  L  +++  GY+PNTNF LHDVEEE KE  L  
Sbjct: 242 EVQNKVHPFIVGDSSHPQIEEIYETLETLTLQMKAAGYIPNTNFVLHDVEEEQKEWILGH 301

Query: 365 HSEKLAIVFGLMNSAPDSDIRIHKNLRVCGDCHTASKFISKVTQRTIVMRDSHRFHHFSN 544
           HSEKLAI FG++++ P + IR+ KNLRVCGDCHTA+KFIS++  R IV+RD+HRFHHF +
Sbjct: 302 HSEKLAIAFGIISTPPGTTIRVVKNLRVCGDCHTATKFISRIVSREIVLRDTHRFHHFKD 361

Query: 545 GMCSCGDYW 571
           G CSCGDYW
Sbjct: 362 GQCSCGDYW 370


>ref|XP_003631669.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33990-like
            [Vitis vinifera]
          Length = 891

 Score =  226 bits (577), Expect = 3e-57
 Identities = 106/189 (56%), Positives = 142/189 (75%)
 Frame = +2

Query: 5    NVELAGLAARSLFELDSKNPGRYICLSNIYTSLGKIDEANQIRNLMRRRGVKKTDGYSVI 184
            N+EL   A+  LFE+DSKN G Y+ LSNIY ++GK +  +++R+L R RG+KKT G+S I
Sbjct: 703  NIELGKFASDRLFEVDSKNVGYYVLLSNIYANVGKWEGVDKVRSLARERGLKKTPGWSTI 762

Query: 185  EVKNKVYKFVVGDQMNPQSKLIYRELAILMDRIREEGYVPNTNFALHDVEEETKETSLYV 364
            EV  KV  F  G+Q +P+ K IY EL +L  +++  GY+P+ +F L DVEE+ KE  L  
Sbjct: 763  EVNRKVDVFYTGNQSHPKCKEIYEELRVLTAKMKSLGYIPDYSFVLQDVEEDEKEHILTS 822

Query: 365  HSEKLAIVFGLMNSAPDSDIRIHKNLRVCGDCHTASKFISKVTQRTIVMRDSHRFHHFSN 544
            HSE+LAI FG++++ P S IRI KNLRVCGDCH A+KFIS++TQR IV+RDS+RFHHF +
Sbjct: 823  HSERLAIAFGIISTPPKSPIRIFKNLRVCGDCHNATKFISRITQREIVVRDSNRFHHFKD 882

Query: 545  GMCSCGDYW 571
            G+CSCGDYW
Sbjct: 883  GICSCGDYW 891


>emb|CBI32403.3| unnamed protein product [Vitis vinifera]
          Length = 658

 Score =  226 bits (577), Expect = 3e-57
 Identities = 106/189 (56%), Positives = 142/189 (75%)
 Frame = +2

Query: 5    NVELAGLAARSLFELDSKNPGRYICLSNIYTSLGKIDEANQIRNLMRRRGVKKTDGYSVI 184
            N+EL   A+  LFE+DSKN G Y+ LSNIY ++GK +  +++R+L R RG+KKT G+S I
Sbjct: 470  NIELGKFASDRLFEVDSKNVGYYVLLSNIYANVGKWEGVDKVRSLARERGLKKTPGWSTI 529

Query: 185  EVKNKVYKFVVGDQMNPQSKLIYRELAILMDRIREEGYVPNTNFALHDVEEETKETSLYV 364
            EV  KV  F  G+Q +P+ K IY EL +L  +++  GY+P+ +F L DVEE+ KE  L  
Sbjct: 530  EVNRKVDVFYTGNQSHPKCKEIYEELRVLTAKMKSLGYIPDYSFVLQDVEEDEKEHILTS 589

Query: 365  HSEKLAIVFGLMNSAPDSDIRIHKNLRVCGDCHTASKFISKVTQRTIVMRDSHRFHHFSN 544
            HSE+LAI FG++++ P S IRI KNLRVCGDCH A+KFIS++TQR IV+RDS+RFHHF +
Sbjct: 590  HSERLAIAFGIISTPPKSPIRIFKNLRVCGDCHNATKFISRITQREIVVRDSNRFHHFKD 649

Query: 545  GMCSCGDYW 571
            G+CSCGDYW
Sbjct: 650  GICSCGDYW 658


>emb|CAN64990.1| hypothetical protein VITISV_001772 [Vitis vinifera]
          Length = 891

 Score =  226 bits (577), Expect = 3e-57
 Identities = 106/189 (56%), Positives = 142/189 (75%)
 Frame = +2

Query: 5    NVELAGLAARSLFELDSKNPGRYICLSNIYTSLGKIDEANQIRNLMRRRGVKKTDGYSVI 184
            N+EL   A+  LFE+DSKN G Y+ LSNIY ++GK +  +++R+L R RG+KKT G+S I
Sbjct: 703  NIELGKFASDRLFEVDSKNVGYYVLLSNIYANVGKWEGVDKVRSLARERGLKKTPGWSTI 762

Query: 185  EVKNKVYKFVVGDQMNPQSKLIYRELAILMDRIREEGYVPNTNFALHDVEEETKETSLYV 364
            EV  KV  F  G+Q +P+ K IY EL +L  +++  GY+P+ +F L DVEE+ KE  L  
Sbjct: 763  EVNRKVDVFYTGNQSHPKCKEIYEELRVLTAKMKSLGYIPDYSFVLQDVEEDEKEHILTS 822

Query: 365  HSEKLAIVFGLMNSAPDSDIRIHKNLRVCGDCHTASKFISKVTQRTIVMRDSHRFHHFSN 544
            HSE+LAI FG++++ P S IRI KNLRVCGDCH A+KFIS++TQR IV+RDS+RFHHF +
Sbjct: 823  HSERLAIAFGIISTPPKSPIRIFKNLRVCGDCHNATKFISRITQREIVVRDSNRFHHFKD 882

Query: 545  GMCSCGDYW 571
            G+CSCGDYW
Sbjct: 883  GICSCGDYW 891


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