BLASTX nr result

ID: Dioscorea21_contig00033444 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00033444
         (410 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002313526.1| predicted protein [Populus trichocarpa] gi|2...   131   5e-29
ref|XP_002328162.1| predicted protein [Populus trichocarpa] gi|2...   125   5e-27
ref|NP_001145638.1| hypothetical protein [Zea mays] gi|223942147...   119   2e-25
ref|XP_002534208.1| conserved hypothetical protein [Ricinus comm...   119   2e-25
ref|XP_003560284.1| PREDICTED: uncharacterized protein DDB_G0273...   119   3e-25

>ref|XP_002313526.1| predicted protein [Populus trichocarpa] gi|222849934|gb|EEE87481.1|
           predicted protein [Populus trichocarpa]
          Length = 729

 Score =  131 bits (330), Expect = 5e-29
 Identities = 73/136 (53%), Positives = 93/136 (68%)
 Frame = +3

Query: 3   EAGKLLYIVVVDEDEIRGDDCERKGGSFSYTRPVLQSTLQLMGCKPRHSFKASRRVFDVM 182
           E GK+LYIVVVDE+E RG   + K  SF YTRPVLQSTLQLMGCK RH+FK S+RVF+VM
Sbjct: 4   EVGKVLYIVVVDEEEKRGKG-KGKEESFRYTRPVLQSTLQLMGCKARHAFKISKRVFEVM 62

Query: 183 RSVYSAEHVSPKSMNSDQSAAWSEGGNKDGGYLRRDFAQIDSTMPFELYKRQTTVMVSRE 362
           R+ +S E    K +      A  E   ++ G L       + ++PFELYKR+TTV+V RE
Sbjct: 63  RNEFSNEVSLSKEVEIRVVDASKENSEREDG-LSSGEEDRNKSIPFELYKRRTTVVVRRE 121

Query: 363 KFLDIVCHVLSQYKYV 410
            FL++VC  L++YKYV
Sbjct: 122 SFLNVVCDALTEYKYV 137


>ref|XP_002328162.1| predicted protein [Populus trichocarpa] gi|222837677|gb|EEE76042.1|
           predicted protein [Populus trichocarpa]
          Length = 738

 Score =  125 bits (313), Expect = 5e-27
 Identities = 73/147 (49%), Positives = 97/147 (65%), Gaps = 11/147 (7%)
 Frame = +3

Query: 3   EAGKLLYIVVVDEDEIRGDDCERKG---GSFSYTRPVLQSTLQLMGCKPRHSFKASRRVF 173
           E GK+LYIVVVDE+E R D  + KG    SF YTRPVLQSTLQLMGCK RH+FK S+RVF
Sbjct: 2   EVGKVLYIVVVDEEEKR-DKGKGKGKGKDSFRYTRPVLQSTLQLMGCKARHAFKISQRVF 60

Query: 174 DVMRSVYSAEHVSPKSMNSDQSAAWSEGGNKDGGYLRRD------FAQID--STMPFELY 329
           ++MRSV  ++ +    +++       E G   G +L +        ++ D   ++PFELY
Sbjct: 61  ELMRSVSHSKEIEITGVDASNGNNEKEDGLSSGVFLGKTEVGNSLVSEEDRYKSIPFELY 120

Query: 330 KRQTTVMVSREKFLDIVCHVLSQYKYV 410
           KR+TTV+V RE FL+ VC  L++YKYV
Sbjct: 121 KRRTTVVVRREAFLNFVCDALTEYKYV 147


>ref|NP_001145638.1| hypothetical protein [Zea mays] gi|223942147|gb|ACN25157.1| unknown
           [Zea mays] gi|413924045|gb|AFW63977.1| hypothetical
           protein ZEAMMB73_515953 [Zea mays]
          Length = 691

 Score =  119 bits (299), Expect = 2e-25
 Identities = 67/133 (50%), Positives = 86/133 (64%)
 Frame = +3

Query: 12  KLLYIVVVDEDEIRGDDCERKGGSFSYTRPVLQSTLQLMGCKPRHSFKASRRVFDVMRSV 191
           KLLYI V D    R         +F YTRPVLQSTL LMGCKPRH+FK S+RVFDVM+S 
Sbjct: 13  KLLYIAVADGGGRR---------AFRYTRPVLQSTLHLMGCKPRHAFKISKRVFDVMKSE 63

Query: 192 YSAEHVSPKSMNSDQSAAWSEGGNKDGGYLRRDFAQIDSTMPFELYKRQTTVMVSREKFL 371
           + A+    KS  + +   +   G  DG   ++   + DS++PFELYK QTTV++SRE+F+
Sbjct: 64  FLAQ---SKSDGAGKQENYPALGLGDGTDTQKMLERSDSSIPFELYKNQTTVVISREEFV 120

Query: 372 DIVCHVLSQYKYV 410
            +VC  LS YKYV
Sbjct: 121 SVVCDALSLYKYV 133


>ref|XP_002534208.1| conserved hypothetical protein [Ricinus communis]
           gi|223525703|gb|EEF28172.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 716

 Score =  119 bits (299), Expect = 2e-25
 Identities = 69/140 (49%), Positives = 90/140 (64%), Gaps = 4/140 (2%)
 Frame = +3

Query: 3   EAGKLLYIVVVDEDEIRGDDCERKGGSFSYTRPVLQSTLQLMGCKPRHSFKASRRVFDVM 182
           E  KLLYIVVVD +E +G +      SF YTRPVLQSTLQLMGCK RH+FK S+RVF++M
Sbjct: 7   EVAKLLYIVVVDAEE-KGKE------SFRYTRPVLQSTLQLMGCKARHAFKISQRVFELM 59

Query: 183 RSVYSAEHVSPK----SMNSDQSAAWSEGGNKDGGYLRRDFAQIDSTMPFELYKRQTTVM 350
           RS  S++ + PK     ++  +   W E   K              ++PFELYKR+TTV+
Sbjct: 60  RSESSSDALLPKLEVTGVDISKGNEWKEFSTK--------------SLPFELYKRRTTVI 105

Query: 351 VSREKFLDIVCHVLSQYKYV 410
           V RE FL++VC  L++YKYV
Sbjct: 106 VRREAFLNVVCESLTEYKYV 125


>ref|XP_003560284.1| PREDICTED: uncharacterized protein DDB_G0273453/DDB_G0273565-like
           [Brachypodium distachyon]
          Length = 686

 Score =  119 bits (298), Expect = 3e-25
 Identities = 66/135 (48%), Positives = 84/135 (62%)
 Frame = +3

Query: 6   AGKLLYIVVVDEDEIRGDDCERKGGSFSYTRPVLQSTLQLMGCKPRHSFKASRRVFDVMR 185
           + KLLYIVV D           +  +F YTRPVLQSTLQLMGCKPRH+FK SRRVF+V +
Sbjct: 4   SSKLLYIVVADHG---------RDNTFRYTRPVLQSTLQLMGCKPRHAFKISRRVFEVTK 54

Query: 186 SVYSAEHVSPKSMNSDQSAAWSEGGNKDGGYLRRDFAQIDSTMPFELYKRQTTVMVSREK 365
                   + +S+ S +    ++G   D      D    DS +PF+LYK QTT +VSRE+
Sbjct: 55  --------TDESLGSPKPGQENDGSIIDAA--AADLFNTDSNVPFQLYKTQTTALVSREE 104

Query: 366 FLDIVCHVLSQYKYV 410
           FLD+VCH L+ YKYV
Sbjct: 105 FLDVVCHALTLYKYV 119


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