BLASTX nr result

ID: Dioscorea21_contig00033372 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00033372
         (733 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003635394.1| PREDICTED: putative pentatricopeptide repeat...   351   1e-94
emb|CBI41047.3| unnamed protein product [Vitis vinifera]              351   1e-94
emb|CAN71515.1| hypothetical protein VITISV_021787 [Vitis vinifera]   351   1e-94
ref|XP_003546958.1| PREDICTED: putative pentatricopeptide repeat...   333   2e-89
ref|XP_004159605.1| PREDICTED: pentatricopeptide repeat-containi...   332   5e-89

>ref|XP_003635394.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At5g65820-like [Vitis vinifera]
          Length = 622

 Score =  351 bits (900), Expect = 1e-94
 Identities = 168/244 (68%), Positives = 194/244 (79%)
 Frame = +1

Query: 1    CNCAADVITYATLISGFSKAGKIDKAYEFVDEMIEQGCKPNASVYLSVFLAXXXXXXXXX 180
            C C AD +TY TLISGF K GKI K YE +D MI+QG  PN   YL +  A         
Sbjct: 326  CGCPADAVTYTTLISGFCKWGKISKGYELLDNMIQQGHIPNPMTYLHIMAAHEKKEELEE 385

Query: 181  XXXXXXRIVKAGCFPDLGVYNTVIRLACKIGELKQAMVLWDEMEASGLSPGLDTFVIMIH 360
                   + K GC PDL +YN VIRLACK+GE+K+ + +W+EMEA+GLSPGLDTFVIMIH
Sbjct: 386  CIELMEEMRKIGCTPDLNIYNIVIRLACKLGEIKEGVRVWNEMEATGLSPGLDTFVIMIH 445

Query: 361  GFLHQGLLIEACKYFKEMVARGLLSAPQYGILKDLLNSLLRAEKVELAKEVWECIVSKGI 540
            GFL Q  L+EAC++FKEMV RGLLSAPQYG LK+LLNSLLRAEK+E++K+VW CI++KG 
Sbjct: 446  GFLSQRCLVEACEFFKEMVGRGLLSAPQYGTLKELLNSLLRAEKLEMSKDVWSCIMTKGC 505

Query: 541  LLNVYAWTIWIHALFSNKHVKEACSYCLDMMDAGLMPQPDTFAKLMKGLKKLYNRQIAAE 720
             LNVYAWTIWIHALFSN HVKEACSYCLDMMDAG+MPQPDTFAKLM+GL+KLYNRQIAAE
Sbjct: 506  DLNVYAWTIWIHALFSNGHVKEACSYCLDMMDAGVMPQPDTFAKLMRGLRKLYNRQIAAE 565

Query: 721  ITEK 732
            ITEK
Sbjct: 566  ITEK 569



 Score = 60.5 bits (145), Expect = 4e-07
 Identities = 54/222 (24%), Positives = 92/222 (41%)
 Frame = +1

Query: 28  YATLISGFSKAGKIDKAYEFVDEMIEQGCKPNASVYLSVFLAXXXXXXXXXXXXXXXRIV 207
           +  L+  F+ A  + KA E +DEM + GC+P+  V+                        
Sbjct: 161 FVVLMRRFASARMVKKAIEVLDEMPKYGCEPDEHVF------------------------ 196

Query: 208 KAGCFPDLGVYNTVIRLACKIGELKQAMVLWDEMEASGLSPGLDTFVIMIHGFLHQGLLI 387
             GC  D           CK G +K+A  L+++M     +P L  F  +++G+  +G L+
Sbjct: 197 --GCLLD---------ALCKNGSVKEAASLFEDMRIR-FTPTLKHFTSLLYGWCREGKLM 244

Query: 388 EACKYFKEMVARGLLSAPQYGILKDLLNSLLRAEKVELAKEVWECIVSKGILLNVYAWTI 567
           EA     ++   G    P   +  +LL     A K+  A ++ + +  K    NV ++T 
Sbjct: 245 EAKYVLVQIREAGF--EPDIVVYNNLLTGYAAAGKMVDAYDLLKEMRRKECEPNVMSFTT 302

Query: 568 WIHALFSNKHVKEACSYCLDMMDAGLMPQPDTFAKLMKGLKK 693
            I AL + K ++EA     +M   G      T+  L+ G  K
Sbjct: 303 LIQALCAKKKMEEAMRVFFEMQSCGCPADAVTYTTLISGFCK 344


>emb|CBI41047.3| unnamed protein product [Vitis vinifera]
          Length = 514

 Score =  351 bits (900), Expect = 1e-94
 Identities = 168/244 (68%), Positives = 194/244 (79%)
 Frame = +1

Query: 1   CNCAADVITYATLISGFSKAGKIDKAYEFVDEMIEQGCKPNASVYLSVFLAXXXXXXXXX 180
           C C AD +TY TLISGF K GKI K YE +D MI+QG  PN   YL +  A         
Sbjct: 218 CGCPADAVTYTTLISGFCKWGKISKGYELLDNMIQQGHIPNPMTYLHIMAAHEKKEELEE 277

Query: 181 XXXXXXRIVKAGCFPDLGVYNTVIRLACKIGELKQAMVLWDEMEASGLSPGLDTFVIMIH 360
                  + K GC PDL +YN VIRLACK+GE+K+ + +W+EMEA+GLSPGLDTFVIMIH
Sbjct: 278 CIELMEEMRKIGCTPDLNIYNIVIRLACKLGEIKEGVRVWNEMEATGLSPGLDTFVIMIH 337

Query: 361 GFLHQGLLIEACKYFKEMVARGLLSAPQYGILKDLLNSLLRAEKVELAKEVWECIVSKGI 540
           GFL Q  L+EAC++FKEMV RGLLSAPQYG LK+LLNSLLRAEK+E++K+VW CI++KG 
Sbjct: 338 GFLSQRCLVEACEFFKEMVGRGLLSAPQYGTLKELLNSLLRAEKLEMSKDVWSCIMTKGC 397

Query: 541 LLNVYAWTIWIHALFSNKHVKEACSYCLDMMDAGLMPQPDTFAKLMKGLKKLYNRQIAAE 720
            LNVYAWTIWIHALFSN HVKEACSYCLDMMDAG+MPQPDTFAKLM+GL+KLYNRQIAAE
Sbjct: 398 DLNVYAWTIWIHALFSNGHVKEACSYCLDMMDAGVMPQPDTFAKLMRGLRKLYNRQIAAE 457

Query: 721 ITEK 732
           ITEK
Sbjct: 458 ITEK 461


>emb|CAN71515.1| hypothetical protein VITISV_021787 [Vitis vinifera]
          Length = 655

 Score =  351 bits (900), Expect = 1e-94
 Identities = 168/244 (68%), Positives = 194/244 (79%)
 Frame = +1

Query: 1    CNCAADVITYATLISGFSKAGKIDKAYEFVDEMIEQGCKPNASVYLSVFLAXXXXXXXXX 180
            C C AD +TY TLISGF K GKI K YE +D MI+QG  PN   YL +  A         
Sbjct: 359  CGCPADAVTYTTLISGFCKWGKISKGYELLDNMIQQGHIPNPMTYLHIMAAHEKKEELEE 418

Query: 181  XXXXXXRIVKAGCFPDLGVYNTVIRLACKIGELKQAMVLWDEMEASGLSPGLDTFVIMIH 360
                   + K GC PDL +YN VIRLACK+GE+K+ + +W+EMEA+GLSPGLDTFVIMIH
Sbjct: 419  CIELMEEMRKIGCTPDLNIYNIVIRLACKLGEIKEGVRVWNEMEATGLSPGLDTFVIMIH 478

Query: 361  GFLHQGLLIEACKYFKEMVARGLLSAPQYGILKDLLNSLLRAEKVELAKEVWECIVSKGI 540
            GFL Q  L+EAC++FKEMV RGLLSAPQYG LK+LLNSLLRAEK+E++K+VW CI++KG 
Sbjct: 479  GFLSQRCLVEACEFFKEMVGRGLLSAPQYGTLKELLNSLLRAEKLEMSKDVWSCIMTKGC 538

Query: 541  LLNVYAWTIWIHALFSNKHVKEACSYCLDMMDAGLMPQPDTFAKLMKGLKKLYNRQIAAE 720
             LNVYAWTIWIHALFSN HVKEACSYCLDMMDAG+MPQPDTFAKLM+GL+KLYNRQIAAE
Sbjct: 539  DLNVYAWTIWIHALFSNGHVKEACSYCLDMMDAGVMPQPDTFAKLMRGLRKLYNRQIAAE 598

Query: 721  ITEK 732
            ITEK
Sbjct: 599  ITEK 602



 Score = 60.5 bits (145), Expect = 4e-07
 Identities = 54/222 (24%), Positives = 92/222 (41%)
 Frame = +1

Query: 28  YATLISGFSKAGKIDKAYEFVDEMIEQGCKPNASVYLSVFLAXXXXXXXXXXXXXXXRIV 207
           +  L+  F+ A  + KA E +DEM + GC+P+  V+                        
Sbjct: 194 FVVLMRRFASARMVKKAIEVLDEMPKYGCEPDEHVF------------------------ 229

Query: 208 KAGCFPDLGVYNTVIRLACKIGELKQAMVLWDEMEASGLSPGLDTFVIMIHGFLHQGLLI 387
             GC  D           CK G +K+A  L+++M     +P L  F  +++G+  +G L+
Sbjct: 230 --GCLLD---------ALCKNGSVKEAASLFEDMRIR-FTPTLKHFTSLLYGWCREGKLM 277

Query: 388 EACKYFKEMVARGLLSAPQYGILKDLLNSLLRAEKVELAKEVWECIVSKGILLNVYAWTI 567
           EA     ++   G    P   +  +LL     A K+  A ++ + +  K    NV ++T 
Sbjct: 278 EAKYVLVQIREAGF--EPDIVVYNNLLTGYAAAGKMVDAYDLLKEMRRKECEPNVMSFTT 335

Query: 568 WIHALFSNKHVKEACSYCLDMMDAGLMPQPDTFAKLMKGLKK 693
            I AL + K ++EA     +M   G      T+  L+ G  K
Sbjct: 336 LIQALCAKKKMEEAMRVFFEMQSCGCPADAVTYTTLISGFCK 377


>ref|XP_003546958.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At5g65820-like [Glycine max]
          Length = 654

 Score =  333 bits (855), Expect = 2e-89
 Identities = 162/243 (66%), Positives = 189/243 (77%), Gaps = 1/243 (0%)
 Frame = +1

Query: 7    CAADVITYATLISGFSKAGKIDKAYEFVDEMIEQGCKPNASVYLSVFLAXXXXXXXXXXX 186
            C ADV+TY+TLISGF K GKI + YE +DEMI+QG  PN  +Y  + LA           
Sbjct: 362  CQADVVTYSTLISGFCKWGKIKRGYELLDEMIQQGHFPNQVIYQHIMLAHEKKEELEECK 421

Query: 187  XXXXRIVKAGCFPDLGVYNTVIRLACKIGELKQAMVLWDEMEASGLSPGLDTFVIMIHGF 366
                 + K GC PDL +YNTVIRLACK+GE+K+ + LW+EME+SGLSPG+DTFVIMI+GF
Sbjct: 422  ELVNEMQKIGCAPDLSIYNTVIRLACKLGEVKEGIQLWNEMESSGLSPGMDTFVIMINGF 481

Query: 367  LHQGLLIEACKYFKEMVARGLLSAPQYGILKDLLNSLLRAEKVELAKEVWECI-VSKGIL 543
            L QG L+EAC+YFKEMV RGL +APQYG LK+L+NSLLRAEK+E+AK+ W CI  SKG  
Sbjct: 482  LEQGCLVEACEYFKEMVGRGLFTAPQYGTLKELMNSLLRAEKLEMAKDAWNCITASKGCQ 541

Query: 544  LNVYAWTIWIHALFSNKHVKEACSYCLDMMDAGLMPQPDTFAKLMKGLKKLYNRQIAAEI 723
            LNV AWTIWIHALFS  HVKEACS+C+DMMD  LMP PDTFAKLM GLKKLYNRQ AAEI
Sbjct: 542  LNVSAWTIWIHALFSKGHVKEACSFCIDMMDKDLMPNPDTFAKLMHGLKKLYNRQFAAEI 601

Query: 724  TEK 732
            TEK
Sbjct: 602  TEK 604


>ref|XP_004159605.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49730-like
            [Cucumis sativus]
          Length = 664

 Score =  332 bits (851), Expect = 5e-89
 Identities = 156/242 (64%), Positives = 189/242 (78%)
 Frame = +1

Query: 7    CAADVITYATLISGFSKAGKIDKAYEFVDEMIEQGCKPNASVYLSVFLAXXXXXXXXXXX 186
            C ADV+TY TLISGF K G  DKAYE +D+MI++G  P+   YL + +A           
Sbjct: 370  CEADVVTYTTLISGFCKWGNTDKAYEILDDMIQKGHDPSQLSYLCIMMAHEKKEELEECM 429

Query: 187  XXXXRIVKAGCFPDLGVYNTVIRLACKIGELKQAMVLWDEMEASGLSPGLDTFVIMIHGF 366
                 + K GC PDL +YNT+IRL CK+G+LK+A+ LW EM+A GL+PGLDT+++M+HGF
Sbjct: 430  ELIEEMRKIGCVPDLNIYNTMIRLVCKLGDLKEAVRLWGEMQAGGLNPGLDTYILMVHGF 489

Query: 367  LHQGLLIEACKYFKEMVARGLLSAPQYGILKDLLNSLLRAEKVELAKEVWECIVSKGILL 546
            L QG L+EAC YFKEMV RGLLSAPQYG LK+L N+LLRAEK+E+AK +W C+ +KG  L
Sbjct: 490  LSQGCLVEACDYFKEMVERGLLSAPQYGTLKELTNALLRAEKLEMAKNMWSCMTTKGCEL 549

Query: 547  NVYAWTIWIHALFSNKHVKEACSYCLDMMDAGLMPQPDTFAKLMKGLKKLYNRQIAAEIT 726
            NV AWTIWIHALFSN HVKEACSYCLDMMDA LMPQPDTFAKLM+GLKKL++RQ+A EIT
Sbjct: 550  NVSAWTIWIHALFSNGHVKEACSYCLDMMDADLMPQPDTFAKLMRGLKKLFHRQLAVEIT 609

Query: 727  EK 732
            EK
Sbjct: 610  EK 611



 Score = 56.6 bits (135), Expect = 5e-06
 Identities = 43/174 (24%), Positives = 78/174 (44%)
 Frame = +1

Query: 208 KAGCFPDLGVYNTVIRLACKIGELKQAMVLWDEMEASGLSPGLDTFVIMIHGFLHQGLLI 387
           K GC PD  V+  ++   CK G +K+A  L+++M     +P L  F  +++G+  +G ++
Sbjct: 228 KYGCEPDEYVFGCLLDALCKNGSVKEAASLFEDMRVR-FNPNLRHFTSLLYGWCREGKIM 286

Query: 388 EACKYFKEMVARGLLSAPQYGILKDLLNSLLRAEKVELAKEVWECIVSKGILLNVYAWTI 567
           EA     ++   G    P   +  +LL    +A K+  A ++   +       N  ++TI
Sbjct: 287 EAKHVLVQIKEAGF--EPDIVVYNNLLGGYAQAGKMRDAFDLLAEMKKVNCGPNAASFTI 344

Query: 568 WIHALFSNKHVKEACSYCLDMMDAGLMPQPDTFAKLMKGLKKLYNRQIAAEITE 729
            I +    + + EA     +M  +G      T+  L+ G  K  N   A EI +
Sbjct: 345 LIQSFCKTEKMDEAMRIFTEMQGSGCEADVVTYTTLISGFCKWGNTDKAYEILD 398


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