BLASTX nr result

ID: Dioscorea21_contig00033357 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00033357
         (473 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAD17217.1| putative DNA repair protein rhp54 [Oryza sativa ...   247   6e-64
ref|NP_001048207.2| Os02g0762800 [Oryza sativa Japonica Group] g...   247   6e-64
gb|EEE57852.1| hypothetical protein OsJ_08484 [Oryza sativa Japo...   247   6e-64
sp|A4PBL4.1|RAD54_ORYSJ RecName: Full=DNA repair and recombinati...   247   6e-64
gb|EEC74047.1| hypothetical protein OsI_09041 [Oryza sativa Indi...   247   8e-64

>dbj|BAD17217.1| putative DNA repair protein rhp54 [Oryza sativa Japonica Group]
          Length = 912

 Score =  247 bits (631), Expect = 6e-64
 Identities = 121/154 (78%), Positives = 137/154 (88%)
 Frame = -3

Query: 462 SLPPGIEPLILWESEGPNEENDQLTRIEVDPLLVCYLRPHQREGVQFMFECVSGLSSAEG 283
           SLPPGIEPLILW+ EG ++EN   + I+VD LLV YLRPHQREGVQFMF+CVSGL + +G
Sbjct: 199 SLPPGIEPLILWQPEGRDKENSNFSAIKVDHLLVRYLRPHQREGVQFMFDCVSGLLNDDG 258

Query: 282 ISGCILADDMGLGKTLQSITLLYTLLCQGFDGKPMVKRAVIVTPTSLVSNWESEINKWVG 103
           ISGCILADDMGLGKTLQSITLLYTLLCQGFD KPMVKRAV+VTPTSLVSNWESEI KW+ 
Sbjct: 259 ISGCILADDMGLGKTLQSITLLYTLLCQGFDAKPMVKRAVVVTPTSLVSNWESEIIKWLK 318

Query: 102 ERIQLLSLCESTRADVVSGIDNFLRPCSPFQVLI 1
            R+QLL+LCESTRADV+SGI++FL+P S  QVLI
Sbjct: 319 GRVQLLALCESTRADVLSGIESFLKPLSRLQVLI 352


>ref|NP_001048207.2| Os02g0762800 [Oryza sativa Japonica Group]
           gi|255671267|dbj|BAF10121.2| Os02g0762800 [Oryza sativa
           Japonica Group]
          Length = 879

 Score =  247 bits (631), Expect = 6e-64
 Identities = 121/154 (78%), Positives = 137/154 (88%)
 Frame = -3

Query: 462 SLPPGIEPLILWESEGPNEENDQLTRIEVDPLLVCYLRPHQREGVQFMFECVSGLSSAEG 283
           SLPPGIEPLILW+ EG ++EN   + I+VD LLV YLRPHQREGVQFMF+CVSGL + +G
Sbjct: 199 SLPPGIEPLILWQPEGRDKENSNFSAIKVDHLLVRYLRPHQREGVQFMFDCVSGLLNDDG 258

Query: 282 ISGCILADDMGLGKTLQSITLLYTLLCQGFDGKPMVKRAVIVTPTSLVSNWESEINKWVG 103
           ISGCILADDMGLGKTLQSITLLYTLLCQGFD KPMVKRAV+VTPTSLVSNWESEI KW+ 
Sbjct: 259 ISGCILADDMGLGKTLQSITLLYTLLCQGFDAKPMVKRAVVVTPTSLVSNWESEIIKWLK 318

Query: 102 ERIQLLSLCESTRADVVSGIDNFLRPCSPFQVLI 1
            R+QLL+LCESTRADV+SGI++FL+P S  QVLI
Sbjct: 319 GRVQLLALCESTRADVLSGIESFLKPLSRLQVLI 352


>gb|EEE57852.1| hypothetical protein OsJ_08484 [Oryza sativa Japonica Group]
          Length = 952

 Score =  247 bits (631), Expect = 6e-64
 Identities = 121/154 (78%), Positives = 137/154 (88%)
 Frame = -3

Query: 462 SLPPGIEPLILWESEGPNEENDQLTRIEVDPLLVCYLRPHQREGVQFMFECVSGLSSAEG 283
           SLPPGIEPLILW+ EG ++EN   + I+VD LLV YLRPHQREGVQFMF+CVSGL + +G
Sbjct: 199 SLPPGIEPLILWQPEGRDKENSNFSAIKVDHLLVRYLRPHQREGVQFMFDCVSGLLNDDG 258

Query: 282 ISGCILADDMGLGKTLQSITLLYTLLCQGFDGKPMVKRAVIVTPTSLVSNWESEINKWVG 103
           ISGCILADDMGLGKTLQSITLLYTLLCQGFD KPMVKRAV+VTPTSLVSNWESEI KW+ 
Sbjct: 259 ISGCILADDMGLGKTLQSITLLYTLLCQGFDAKPMVKRAVVVTPTSLVSNWESEIIKWLK 318

Query: 102 ERIQLLSLCESTRADVVSGIDNFLRPCSPFQVLI 1
            R+QLL+LCESTRADV+SGI++FL+P S  QVLI
Sbjct: 319 GRVQLLALCESTRADVLSGIESFLKPLSRLQVLI 352


>sp|A4PBL4.1|RAD54_ORYSJ RecName: Full=DNA repair and recombination protein RAD54;
           Short=OsRad54 gi|144369229|dbj|BAF56217.1| OsRad54
           [Oryza sativa Japonica Group]
          Length = 980

 Score =  247 bits (631), Expect = 6e-64
 Identities = 121/154 (78%), Positives = 137/154 (88%)
 Frame = -3

Query: 462 SLPPGIEPLILWESEGPNEENDQLTRIEVDPLLVCYLRPHQREGVQFMFECVSGLSSAEG 283
           SLPPGIEPLILW+ EG ++EN   + I+VD LLV YLRPHQREGVQFMF+CVSGL + +G
Sbjct: 199 SLPPGIEPLILWQPEGRDKENSNFSAIKVDHLLVRYLRPHQREGVQFMFDCVSGLLNDDG 258

Query: 282 ISGCILADDMGLGKTLQSITLLYTLLCQGFDGKPMVKRAVIVTPTSLVSNWESEINKWVG 103
           ISGCILADDMGLGKTLQSITLLYTLLCQGFD KPMVKRAV+VTPTSLVSNWESEI KW+ 
Sbjct: 259 ISGCILADDMGLGKTLQSITLLYTLLCQGFDAKPMVKRAVVVTPTSLVSNWESEIIKWLK 318

Query: 102 ERIQLLSLCESTRADVVSGIDNFLRPCSPFQVLI 1
            R+QLL+LCESTRADV+SGI++FL+P S  QVLI
Sbjct: 319 GRVQLLALCESTRADVLSGIESFLKPLSRLQVLI 352


>gb|EEC74047.1| hypothetical protein OsI_09041 [Oryza sativa Indica Group]
          Length = 952

 Score =  247 bits (630), Expect = 8e-64
 Identities = 121/154 (78%), Positives = 137/154 (88%)
 Frame = -3

Query: 462 SLPPGIEPLILWESEGPNEENDQLTRIEVDPLLVCYLRPHQREGVQFMFECVSGLSSAEG 283
           SLPPGIEPLILW+ EG ++EN   + I+VD LLV YLRPHQREGVQFMF+CVSGL + +G
Sbjct: 199 SLPPGIEPLILWQPEGCDKENSNFSAIKVDHLLVRYLRPHQREGVQFMFDCVSGLLNDDG 258

Query: 282 ISGCILADDMGLGKTLQSITLLYTLLCQGFDGKPMVKRAVIVTPTSLVSNWESEINKWVG 103
           ISGCILADDMGLGKTLQSITLLYTLLCQGFD KPMVKRAV+VTPTSLVSNWESEI KW+ 
Sbjct: 259 ISGCILADDMGLGKTLQSITLLYTLLCQGFDAKPMVKRAVVVTPTSLVSNWESEIIKWLK 318

Query: 102 ERIQLLSLCESTRADVVSGIDNFLRPCSPFQVLI 1
            R+QLL+LCESTRADV+SGI++FL+P S  QVLI
Sbjct: 319 GRVQLLALCESTRADVLSGIESFLKPLSRLQVLI 352


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