BLASTX nr result

ID: Dioscorea21_contig00033338 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00033338
         (514 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002321254.1| predicted protein [Populus trichocarpa] gi|2...   184   8e-45
ref|XP_002265239.2| PREDICTED: DNA2-like helicase-like [Vitis vi...   181   4e-44
emb|CBI16750.3| unnamed protein product [Vitis vinifera]              181   4e-44
emb|CAN84171.1| hypothetical protein VITISV_028526 [Vitis vinifera]   181   4e-44
ref|XP_003580414.1| PREDICTED: LOW QUALITY PROTEIN: DNA2-like he...   181   7e-44

>ref|XP_002321254.1| predicted protein [Populus trichocarpa] gi|222862027|gb|EEE99569.1|
            predicted protein [Populus trichocarpa]
          Length = 1152

 Score =  184 bits (466), Expect = 8e-45
 Identities = 93/143 (65%), Positives = 112/143 (78%)
 Frame = +2

Query: 5    KDYKPGSNPMEAYVVSEVTRELVKRGICWNEIGIITPYNSQANLIRSVIDASGLVEVHTI 184
            KD K  +NP+EAY+V+EVT+EL+  GI  ++IGIITPYNSQANLIR+ ++ +  VE+HTI
Sbjct: 1011 KDSKTVNNPIEAYIVAEVTKELLNNGIVGDDIGIITPYNSQANLIRASVNVTS-VEIHTI 1069

Query: 185  DKYQGRDKNCILVSFVXXXXXXXXXXXXLLGDWHRINVALTRAKKKLIMVGSSETLSKIP 364
            DKYQGRDK CILVSF             LLGDWHRINVALTRAKKKLI+VGS +TLSK+P
Sbjct: 1070 DKYQGRDKECILVSFARSSENPRNCTSSLLGDWHRINVALTRAKKKLILVGSCKTLSKVP 1129

Query: 365  LLKLLIEKVNEQGGIIHIPSKDI 433
            LLKLL+EKV EQ GII++   DI
Sbjct: 1130 LLKLLVEKVEEQSGIINVSKTDI 1152


>ref|XP_002265239.2| PREDICTED: DNA2-like helicase-like [Vitis vinifera]
          Length = 1438

 Score =  181 bits (460), Expect = 4e-44
 Identities = 95/153 (62%), Positives = 114/153 (74%)
 Frame = +2

Query: 5    KDYKPGSNPMEAYVVSEVTRELVKRGICWNEIGIITPYNSQANLIRSVIDASGLVEVHTI 184
            KD+K  +NP+EA ++SEV  ELV  GI   +IGIITPYNSQANLIR  +  +  VE++TI
Sbjct: 1284 KDHKTVNNPIEACIISEVAEELVNNGIEGEDIGIITPYNSQANLIRHTVSTTS-VEINTI 1342

Query: 185  DKYQGRDKNCILVSFVXXXXXXXXXXXXLLGDWHRINVALTRAKKKLIMVGSSETLSKIP 364
            DKYQGRDK+CILVSFV            LLGDWHRINVALTRAK+KLIMVGS  TLSK+P
Sbjct: 1343 DKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVALTRAKRKLIMVGSFRTLSKVP 1402

Query: 365  LLKLLIEKVNEQGGIIHIPSKDIQHIECLKKCS 463
            LL+LLIEKV EQ G +++  KDI +   LK+CS
Sbjct: 1403 LLRLLIEKVEEQSGRLNVSLKDINYKGELKRCS 1435


>emb|CBI16750.3| unnamed protein product [Vitis vinifera]
          Length = 696

 Score =  181 bits (460), Expect = 4e-44
 Identities = 95/153 (62%), Positives = 114/153 (74%)
 Frame = +2

Query: 5   KDYKPGSNPMEAYVVSEVTRELVKRGICWNEIGIITPYNSQANLIRSVIDASGLVEVHTI 184
           KD+K  +NP+EA ++SEV  ELV  GI   +IGIITPYNSQANLIR  +  +  VE++TI
Sbjct: 542 KDHKTVNNPIEACIISEVAEELVNNGIEGEDIGIITPYNSQANLIRHTVSTTS-VEINTI 600

Query: 185 DKYQGRDKNCILVSFVXXXXXXXXXXXXLLGDWHRINVALTRAKKKLIMVGSSETLSKIP 364
           DKYQGRDK+CILVSFV            LLGDWHRINVALTRAK+KLIMVGS  TLSK+P
Sbjct: 601 DKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVALTRAKRKLIMVGSFRTLSKVP 660

Query: 365 LLKLLIEKVNEQGGIIHIPSKDIQHIECLKKCS 463
           LL+LLIEKV EQ G +++  KDI +   LK+CS
Sbjct: 661 LLRLLIEKVEEQSGRLNVSLKDINYKGELKRCS 693


>emb|CAN84171.1| hypothetical protein VITISV_028526 [Vitis vinifera]
          Length = 315

 Score =  181 bits (460), Expect = 4e-44
 Identities = 95/153 (62%), Positives = 114/153 (74%)
 Frame = +2

Query: 5   KDYKPGSNPMEAYVVSEVTRELVKRGICWNEIGIITPYNSQANLIRSVIDASGLVEVHTI 184
           KD+K  +NP+EA ++SEV  ELV  GI   +IGIITPYNSQANLIR  +  +  VE++TI
Sbjct: 161 KDHKTVNNPIEACIISEVAEELVNNGIEGEDIGIITPYNSQANLIRHTVSTTS-VEINTI 219

Query: 185 DKYQGRDKNCILVSFVXXXXXXXXXXXXLLGDWHRINVALTRAKKKLIMVGSSETLSKIP 364
           DKYQGRDK+CILVSFV            LLGDWHRINVALTRAK+KLIMVGS  TLSK+P
Sbjct: 220 DKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVALTRAKRKLIMVGSFRTLSKVP 279

Query: 365 LLKLLIEKVNEQGGIIHIPSKDIQHIECLKKCS 463
           LL+LLIEKV EQ G +++  KDI +   LK+CS
Sbjct: 280 LLRLLIEKVEEQSGRLNVSLKDINYKGELKRCS 312


>ref|XP_003580414.1| PREDICTED: LOW QUALITY PROTEIN: DNA2-like helicase-like [Brachypodium
            distachyon]
          Length = 1281

 Score =  181 bits (458), Expect = 7e-44
 Identities = 92/155 (59%), Positives = 118/155 (76%)
 Frame = +2

Query: 5    KDYKPGSNPMEAYVVSEVTRELVKRGICWNEIGIITPYNSQANLIRSVIDASGLVEVHTI 184
            K+++  +NP EAY+VS +T++L+KRG+  +EIGIITPYN+QANLIR  +D+  LVEVHTI
Sbjct: 1127 KEHRIVNNPTEAYIVSWITKQLLKRGVSQDEIGIITPYNAQANLIRQHVDS--LVEVHTI 1184

Query: 185  DKYQGRDKNCILVSFVXXXXXXXXXXXXLLGDWHRINVALTRAKKKLIMVGSSETLSKIP 364
            DKYQGRDK CI+VSFV            LLGDWHRINV LTRAKKKLIMVGS+ TLS IP
Sbjct: 1185 DKYQGRDKECIIVSFVRSSGDSRASGSSLLGDWHRINVVLTRAKKKLIMVGSAGTLSSIP 1244

Query: 365  LLKLLIEKVNEQGGIIHIPSKDIQHIECLKKCSLN 469
            LL+LL+E+V + GG++ + +KD+  I  L+   LN
Sbjct: 1245 LLRLLVEQVAKCGGLLDLTNKDVHSIPELRSSRLN 1279


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