BLASTX nr result

ID: Dioscorea21_contig00033329 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00033329
         (338 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAO41129.1| putative MATE efflux membrane protein [Oryza sati...   122   4e-26
gb|EAY92507.1| hypothetical protein OsI_14245 [Oryza sativa Indi...   122   4e-26
dbj|BAK03584.1| predicted protein [Hordeum vulgare subsp. vulgare]    120   1e-25
ref|NP_001145798.1| uncharacterized protein LOC100279305 [Zea ma...   114   8e-24
ref|XP_002466128.1| hypothetical protein SORBIDRAFT_01g001900 [S...   113   2e-23

>gb|AAO41129.1| putative MATE efflux membrane protein [Oryza sativa Japonica Group]
           gi|108711998|gb|ABF99793.1| MATE efflux family protein,
           expressed [Oryza sativa Japonica Group]
           gi|215768913|dbj|BAH01142.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 516

 Score =  122 bits (305), Expect = 4e-26
 Identities = 61/99 (61%), Positives = 78/99 (78%), Gaps = 2/99 (2%)
 Frame = +1

Query: 46  NTILQPLRVFLRSQGITRPMAACSAAAVALHIPLNLLFVSILHLGIPGVALAGALTNLNM 225
           + +LQPLRV+LRSQGIT+PMAACSA AVALH+PLN+L V  L  G+ GVA A ALTN NM
Sbjct: 170 SAVLQPLRVYLRSQGITKPMAACSAIAVALHVPLNVLLVFGLGFGVRGVAAAQALTNTNM 229

Query: 226 VIFLIFYLRFSGACGLTWRGWS--SAAFTGVTPLLRLAV 336
           V+FL+ Y+R+S AC  TW+GW+  +A  +G+  L+RLAV
Sbjct: 230 VLFLLAYIRWSRACDATWKGWARPAAVASGLAGLVRLAV 268


>gb|EAY92507.1| hypothetical protein OsI_14245 [Oryza sativa Indica Group]
          Length = 516

 Score =  122 bits (305), Expect = 4e-26
 Identities = 61/99 (61%), Positives = 78/99 (78%), Gaps = 2/99 (2%)
 Frame = +1

Query: 46  NTILQPLRVFLRSQGITRPMAACSAAAVALHIPLNLLFVSILHLGIPGVALAGALTNLNM 225
           + +LQPLRV+LRSQGIT+PMAACSA AVALH+PLN+L V  L  G+ GVA A ALTN NM
Sbjct: 170 SAVLQPLRVYLRSQGITKPMAACSAIAVALHVPLNVLLVFGLGFGVRGVAAAQALTNTNM 229

Query: 226 VIFLIFYLRFSGACGLTWRGWS--SAAFTGVTPLLRLAV 336
           V+FL+ Y+R+S AC  TW+GW+  +A  +G+  L+RLAV
Sbjct: 230 VLFLLAYIRWSRACDATWKGWARPAAVASGLAGLVRLAV 268


>dbj|BAK03584.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 514

 Score =  120 bits (300), Expect = 1e-25
 Identities = 61/97 (62%), Positives = 79/97 (81%), Gaps = 2/97 (2%)
 Frame = +1

Query: 52  ILQPLRVFLRSQGITRPMAACSAAAVALHIPLNLLFVSILHLGIPGVALAGALTNLNMVI 231
           +LQPLRV+LRSQGIT+PMAACSAAAVALH+PLN+L V  +  G+ GVA A ALTN NMV+
Sbjct: 171 VLQPLRVYLRSQGITKPMAACSAAAVALHVPLNVLLVFKMGFGVRGVAAAQALTNTNMVL 230

Query: 232 FLIFYLRFSGACGLTWRGWS--SAAFTGVTPLLRLAV 336
           FL+ Y+R++GAC  TWRG++  +A  +G+  L+RLAV
Sbjct: 231 FLLAYVRWAGACDDTWRGFARPAAVASGLGGLVRLAV 267


>ref|NP_001145798.1| uncharacterized protein LOC100279305 [Zea mays]
           gi|219884469|gb|ACL52609.1| unknown [Zea mays]
           gi|413932483|gb|AFW67034.1| putative MATE efflux family
           protein [Zea mays]
          Length = 505

 Score =  114 bits (285), Expect = 8e-24
 Identities = 60/97 (61%), Positives = 74/97 (76%), Gaps = 2/97 (2%)
 Frame = +1

Query: 52  ILQPLRVFLRSQGITRPMAACSAAAVALHIPLNLLFVSILHLGIPGVALAGALTNLNMVI 231
           +LQPLRV+LRSQGITRPMAACSAAAVALH+PLN+  V  L LG+ GVA A ALTN NM++
Sbjct: 170 VLQPLRVYLRSQGITRPMAACSAAAVALHVPLNVGLVFGLGLGVRGVAAAQALTNANMLL 229

Query: 232 FLIFYLRFSGACGLTWRGWSSAA--FTGVTPLLRLAV 336
           FL+ Y+R++ AC  TW+GW+  A    G+  L  LAV
Sbjct: 230 FLLAYVRWARACEHTWKGWARPADVAAGLPALAGLAV 266


>ref|XP_002466128.1| hypothetical protein SORBIDRAFT_01g001900 [Sorghum bicolor]
           gi|241919982|gb|EER93126.1| hypothetical protein
           SORBIDRAFT_01g001900 [Sorghum bicolor]
          Length = 529

 Score =  113 bits (282), Expect = 2e-23
 Identities = 57/97 (58%), Positives = 74/97 (76%), Gaps = 2/97 (2%)
 Frame = +1

Query: 52  ILQPLRVFLRSQGITRPMAACSAAAVALHIPLNLLFVSILHLGIPGVALAGALTNLNMVI 231
           +LQPLRV+LRSQGITRPMAACSA AV LH+PLN+  V  + LG+ GVA A ALTN NM++
Sbjct: 179 VLQPLRVYLRSQGITRPMAACSAIAVVLHVPLNVALVFGMGLGVRGVAAAQALTNTNMLL 238

Query: 232 FLIFYLRFSGACGLTWRGWS--SAAFTGVTPLLRLAV 336
           FL+ Y+R++ AC  TW+GW+  +A  +G+  L  LAV
Sbjct: 239 FLLAYIRWARACEGTWKGWARPAAVASGLPALASLAV 275


Top