BLASTX nr result
ID: Dioscorea21_contig00033319
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dioscorea21_contig00033319
(576 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002267486.1| PREDICTED: putative pentatricopeptide repeat... 105 2e-39
ref|XP_002517262.1| pentatricopeptide repeat-containing protein,... 93 2e-36
ref|XP_004135727.1| PREDICTED: putative pentatricopeptide repeat... 88 3e-34
gb|EEE51466.1| hypothetical protein OsJ_32592 [Oryza sativa Japo... 80 5e-28
gb|EAY79643.1| hypothetical protein OsI_34787 [Oryza sativa Indi... 80 5e-28
>ref|XP_002267486.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g16830 [Vitis vinifera] gi|297735747|emb|CBI18434.3|
unnamed protein product [Vitis vinifera]
Length = 659
Score = 105 bits (263), Expect(2) = 2e-39
Identities = 51/110 (46%), Positives = 72/110 (65%)
Frame = -2
Query: 332 FFKEISFPNFISFNIVIGNLCKYGDWWSVGVLLREMIDRGFWPNSGTYAMVLDCFHKEGR 153
F KE NF++F+I + NLC+ D VG +LR M+ +G+ P+ ++MVL+CF K GR
Sbjct: 182 FLKETRVSNFLTFSIALCNLCRLNDLVGVGDVLRMMLRKGYCPSVEIFSMVLNCFCKVGR 241
Query: 152 IMELLQLLGFMTVLGEQLSVAIWTILIDMYRKIGNLDMAGKLFGKMLESG 3
E Q+LG M LG +SV +W+ILID YR+IG + AG L KM+E+G
Sbjct: 242 FAEAFQVLGLMATLGIPISVTVWSILIDGYRRIGKIGRAGNLLEKMVETG 291
Score = 82.4 bits (202), Expect(2) = 2e-39
Identities = 34/72 (47%), Positives = 52/72 (72%)
Frame = -1
Query: 576 RLSDRFGNVSGIVDELESIGCGRKAQALLVLMRVYWRGDMYSLALEVFDEMRSRNFVPNT 397
RL+ + G + G++DEL SIGC KAQ L+L+R+ WRG +Y L +V++EM + +VPN
Sbjct: 101 RLTQKSGTIRGVMDELGSIGCVVKAQTFLLLLRICWRGKLYGLVFDVYEEMIAFGYVPNA 160
Query: 396 FAWNIVVDILFK 361
F N+++D+LFK
Sbjct: 161 FVCNVIIDVLFK 172
>ref|XP_002517262.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223543633|gb|EEF45162.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 321
Score = 93.2 bits (230), Expect(2) = 2e-36
Identities = 47/107 (43%), Positives = 68/107 (63%)
Frame = -2
Query: 326 KEISFPNFISFNIVIGNLCKYGDWWSVGVLLREMIDRGFWPNSGTYAMVLDCFHKEGRIM 147
KE+ PNF+S+NI + NLCK D V LR M+ +G++PN T+ MVL+C K GR++
Sbjct: 135 KEMKSPNFLSYNIALTNLCKLNDLVKVKKALRIMLSKGYYPNVETFEMVLNCCCKLGRLV 194
Query: 146 ELLQLLGFMTVLGEQLSVAIWTILIDMYRKIGNLDMAGKLFGKMLES 6
E QLL M +G LSV+ W+ILID ++ +MA L +M++S
Sbjct: 195 EACQLLAMMITVGISLSVSAWSILIDWLCRLNQPNMAFHLMERMVDS 241
Score = 84.7 bits (208), Expect(2) = 2e-36
Identities = 40/74 (54%), Positives = 52/74 (70%)
Frame = -1
Query: 576 RLSDRFGNVSGIVDELESIGCGRKAQALLVLMRVYWRGDMYSLALEVFDEMRSRNFVPNT 397
RLS+R+ V IV ELES+G KA L+L+R+YWRG MYS+ E F++M F PNT
Sbjct: 52 RLSNRYMTVRAIVRELESVGLVIKAHTFLLLLRIYWRGGMYSMVFETFEQMGRFGFEPNT 111
Query: 396 FAWNIVVDILFKSG 355
FA N+V+D+LFK G
Sbjct: 112 FAHNVVMDVLFKIG 125
>ref|XP_004135727.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g16830-like [Cucumis sativus]
Length = 665
Score = 88.2 bits (217), Expect(2) = 3e-34
Identities = 47/109 (43%), Positives = 65/109 (59%)
Frame = -2
Query: 329 FKEISFPNFISFNIVIGNLCKYGDWWSVGVLLREMIDRGFWPNSGTYAMVLDCFHKEGRI 150
FKE PNF++FNIV+ NL K D +G R M+ G+ PN GT+ +VL+ K GR+
Sbjct: 189 FKETLLPNFLTFNIVLCNLSKTKDLIGIGDTFRCMLRMGYCPNPGTFEVVLNGLCKLGRL 248
Query: 149 MELLQLLGFMTVLGEQLSVAIWTILIDMYRKIGNLDMAGKLFGKMLESG 3
E Q+ G MT G +SV IWTI+ID + ++ + A L KM +SG
Sbjct: 249 AEAYQVWGIMTTFGISMSVNIWTIMIDGFCRLRRTEEASSLVKKMKKSG 297
Score = 82.8 bits (203), Expect(2) = 3e-34
Identities = 38/74 (51%), Positives = 50/74 (67%)
Frame = -1
Query: 576 RLSDRFGNVSGIVDELESIGCGRKAQALLVLMRVYWRGDMYSLALEVFDEMRSRNFVPNT 397
RL ++ V+GI+ LES+G KAQ L+L+R+YWRG MY L E FD M F PNT
Sbjct: 107 RLMKQYETVNGILGGLESVGNVTKAQTFLLLLRIYWRGGMYDLVFEAFDHMDRYGFTPNT 166
Query: 396 FAWNIVVDILFKSG 355
FA N+++D+LFK G
Sbjct: 167 FARNVIMDVLFKVG 180
>gb|EEE51466.1| hypothetical protein OsJ_32592 [Oryza sativa Japonica Group]
Length = 706
Score = 79.7 bits (195), Expect(2) = 5e-28
Identities = 42/110 (38%), Positives = 63/110 (57%)
Frame = -2
Query: 332 FFKEISFPNFISFNIVIGNLCKYGDWWSVGVLLREMIDRGFWPNSGTYAMVLDCFHKEGR 153
F ++ PN++++ I++ +LC+ G+W V M+ +GF P++ + V C K
Sbjct: 240 FLRDNPSPNYLTYAILLTHLCRSGNWPGVRACFLAMLHQGFLPSAASLNAVFACCTKLAA 299
Query: 152 IMELLQLLGFMTVLGEQLSVAIWTILIDMYRKIGNLDMAGKLFGKMLESG 3
ELLQLLGF V G QL+ A+WT LI + G LD A ++ KML SG
Sbjct: 300 TSELLQLLGFTLVSGYQLTSAMWTCLIARLCREGKLDEAIRMLAKMLASG 349
Score = 70.1 bits (170), Expect(2) = 5e-28
Identities = 30/75 (40%), Positives = 48/75 (64%)
Frame = -1
Query: 576 RLSDRFGNVSGIVDELESIGCGRKAQALLVLMRVYWRGDMYSLALEVFDEMRSRNFVPNT 397
RL+ R I+ +L ++GC + L+L+R+YWRG +Y L L++FD+M F PN
Sbjct: 159 RLASRLRTAPAILHQLRALGCPIRPHTFLLLLRLYWRGGIYPLVLQLFDQMPLWGFHPNA 218
Query: 396 FAWNIVVDILFKSGH 352
FA N+V+D+L ++ H
Sbjct: 219 FARNVVLDVLLRTRH 233
>gb|EAY79643.1| hypothetical protein OsI_34787 [Oryza sativa Indica Group]
Length = 631
Score = 79.7 bits (195), Expect(2) = 5e-28
Identities = 42/110 (38%), Positives = 63/110 (57%)
Frame = -2
Query: 332 FFKEISFPNFISFNIVIGNLCKYGDWWSVGVLLREMIDRGFWPNSGTYAMVLDCFHKEGR 153
F ++ PN++++ I++ +LC+ G+W V M+ +GF P++ + V C K
Sbjct: 165 FLRDNPSPNYLTYAILLTHLCRSGNWPGVRACFLAMLHQGFLPSAASLNAVFACCTKLAA 224
Query: 152 IMELLQLLGFMTVLGEQLSVAIWTILIDMYRKIGNLDMAGKLFGKMLESG 3
ELLQLLGF V G QL+ A+WT LI + G LD A ++ KML SG
Sbjct: 225 TSELLQLLGFTLVSGYQLTSAMWTCLIARLCREGKLDEAIRMLAKMLASG 274
Score = 70.1 bits (170), Expect(2) = 5e-28
Identities = 30/75 (40%), Positives = 48/75 (64%)
Frame = -1
Query: 576 RLSDRFGNVSGIVDELESIGCGRKAQALLVLMRVYWRGDMYSLALEVFDEMRSRNFVPNT 397
RL+ R I+ +L ++GC + L+L+R+YWRG +Y L L++FD+M F PN
Sbjct: 84 RLASRLRTAPAILHQLRALGCPIRPHTFLLLLRLYWRGGIYPLVLQLFDQMPLWGFHPNA 143
Query: 396 FAWNIVVDILFKSGH 352
FA N+V+D+L ++ H
Sbjct: 144 FARNVVLDVLLRTRH 158